Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-196n4.5

Gene Name Gene ID Reads Annotation
si:ch211-196n4.5 si:ch211-196n4.5 63










Genes with expression patterns similar to si:ch211-196n4.5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-196n4.5 si:ch211-196n4.5 63 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. CABZ01081748.1 ENSDARG00000102139 31 2.551 - 0.954 0.763 - - - 0.834 - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100007471]
3. pdgfra ENSDARG00000070494, ENSDARG00000113952 6 1.978 - 0.978 - - - 1.000 - - - platelet-derived growth factor receptor, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-208]
4. ACBD3 ENSDARG00000042623 159 1.893 - 0.942 - - - 0.951 - - - acyl-Coenzyme A binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1930]
5. mmachc ENSDARG00000043877 29 1.862 0.881 - - - - 0.981 - - - methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria [Source:ZFIN;Acc:ZDB-GENE-030131-3167]
6. si:dkey-85n7.8 ENSDARG00000095793 31 1.859 0.881 0.978 - - - - - - - si:dkey-85n7.8 [Source:ZFIN;Acc:ZDB-GENE-110411-127]
7. CABZ01070852.2 ENSDARG00000114999 16 1.838 0.881 - - - - 0.957 - - -
8. si:dkey-104n9.1 ENSDARG00000093042 41 1.833 - - - - - 1.000 0.833 - - si:dkey-104n9.1 [Source:ZFIN;Acc:ZDB-GENE-081104-300]
9. dnah7 ENSDARG00000060165 21 1.811 - 0.978 - - - - 0.833 - - dynein, axonemal, heavy chain 7 [Source:ZFIN;Acc:ZDB-GENE-070912-282]
10. si:dkey-13m3.1 si:dkey-13m3.1 45 1.775 - 0.942 - - - - 0.833 - -
11. tob1a ENSDARG00000032619 3 1.765 0.881 - - - - 0.884 - - - transducer of ERBB2, 1a [Source:ZFIN;Acc:ZDB-GENE-031030-4]
12. plat ENSDARG00000062707 491 1.758 - 0.955 - - - - 0.803 - - plasminogen activator, tissue [Source:ZFIN;Acc:ZDB-GENE-081104-181]
13. vipr1b ENSDARG00000059058 62 1.75 0.881 - - - - - 0.869 - - vasoactive intestinal peptide receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050311-6]
14. cx41.8 cx41.8 7 1.746 - - - 0.746 - 1.000 - - -
15. tnnt2a ENSDARG00000020610 313 1.74 - 0.978 - - - - - 0.762 - troponin T type 2a (cardiac) [Source:ZFIN;Acc:ZDB-GENE-000626-1]
16. TTF1_3 TTF1_3 215 1.732 - 0.908 - - - - 0.824 - -
17. CR762483.1 ENSDARG00000114454 44 1.73 - - - - - 0.900 0.830 - - growth-regulated alpha protein-like [Source:NCBI gene;Acc:101883994]
18. si:dkey-19n13.5 si:dkey-19n13.5 36 1.717 - 0.857 - - - 0.860 - - -
19. SOX8 SOX8 22 1.714 0.881 - - - - - 0.833 - -
20. 5S_rRNA_10 5S_rRNA_10 2 1.714 0.881 - - - - - 0.833 - -
21. F2RL3 ENSDARG00000079399 29 1.714 0.881 - - - - - 0.833 - - F2R like thrombin or trypsin receptor 3 [Source:HGNC Symbol;Acc:HGNC:3540]
22. si:ch211-160d14.9 8 1.714 0.881 - - - - - 0.833 - - si:ch211-160d14.9, transcript variant X1
23. wnt8b ENSDARG00000006911 98 1.709 - 0.978 0.731 - - - - - - wingless-type MMTV integration site family, member 8b [Source:ZFIN;Acc:ZDB-GENE-990415-279]
24. LRRC61 ENSDARG00000077357 55 1.705 - 0.968 - - - - 0.737 - - leucine rich repeat containing 61 [Source:ZFIN;Acc:ZDB-GENE-060616-245]
25. BX571811.1 ENSDARG00000105621 25 1.704 - 0.846 - - - - - 0.858 -
26. si:zfos-979f1.2 ENSDARG00000011652 24 1.7 0.881 0.819 - - - - - - - si:zfos-979f1.2 [Source:ZFIN;Acc:ZDB-GENE-091204-441]
27. si:ch211-260m19.8 si:ch211-260m19.8 33 1.692 - 0.933 0.759 - - - - - -
28. CT025934.2 CT025934.2 22 1.69 - 0.857 - - - - 0.833 - -
29. MYO7B MYO7B 8 1.689 - - - - - 0.856 0.833 - -
30. rnf17 ENSDARG00000056387, ENSDARG00000113359 36 1.676 0.881 - - - - - 0.795 - - ring finger protein 17 [Source:ZFIN;Acc:ZDB-GENE-030131-6451]
31. ippk ENSDARG00000003446 51 1.673 - 0.951 0.722 - - - - - - inositol 1,3,4,5,6-pentakisphosphate 2-kinase [Source:ZFIN;Acc:ZDB-GENE-050327-41]
32. UBAP1L UBAP1L 130 1.654 - 0.857 - - - 0.797 - - -
33. zgc:152863 ENSDARG00000099969 99 1.653 - 0.908 - - - - 0.745 - - zgc:152863 [Source:ZFIN;Acc:ZDB-GENE-061103-463]
34. U1_50 U1_50 62 1.651 - 0.893 0.758 - - - - - -
35. prkacbb_1 ENSDARG00000059125 83 1.647 - 0.929 0.718 - - - - - - protein kinase, cAMP-dependent, catalytic, beta b [Source:ZFIN;Acc:ZDB-GENE-050904-4]
36. il15 ENSDARG00000052361 219 1.635 0.815 0.820 - - - - - - - interleukin 15 [Source:ZFIN;Acc:ZDB-GENE-060213-2]
37. si:dkey-3h3.3 ENSDARG00000067718 225 1.634 - 0.802 - - - - 0.832 - - si:dkey-3h3.3 [Source:ZFIN;Acc:ZDB-GENE-060526-299]
38. slc6a6b ENSDARG00000098438 7 1.632 0.881 - - - - 0.751 - - - solute carrier family 6 (neurotransmitter transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030131-3077]
39. IQUB ENSDARG00000061899 91 1.632 - 0.807 - - - - 0.825 - - IQ motif and ubiquitin domain containing [Source:ZFIN;Acc:ZDB-GENE-110421-1]
40. gpr155a ENSDARG00000090804 27 1.627 0.881 - 0.746 - - - - - - G protein-coupled receptor 155a [Source:ZFIN;Acc:ZDB-GENE-100922-89]
41. ubxn10 ENSDARG00000052535 24 1.62 0.881 - - - - - 0.739 - - UBX domain protein 10 [Source:ZFIN;Acc:ZDB-GENE-060825-319]
42. CABZ01069081.1 CABZ01069081.1 16 1.62 0.881 - - - - - 0.739 - -
43. cmlc1 ENSDARG00000032976 455 1.618 0.881 - - - - - - 0.737 - cardiac myosin light chain-1 [Source:ZFIN;Acc:ZDB-GENE-030522-1]
44. asic2 ENSDARG00000006849 18 1.618 0.881 - - - - 0.737 - - - acid-sensing (proton-gated) ion channel 2 [Source:ZFIN;Acc:ZDB-GENE-040513-4]
45. sele ENSDARG00000009123 122 1.604 0.881 0.723 - - - - - - - selectin E [Source:ZFIN;Acc:ZDB-GENE-041014-221]
46. cacnb2a ENSDARG00000099045 374 1.596 0.881 - - - - - 0.715 - - calcium channel, voltage-dependent, beta 2a [Source:ZFIN;Acc:ZDB-GENE-080808-7]
47. gp1bb ENSDARG00000074441 116 1.594 0.881 0.713 - - - - - - - glycoprotein Ib platelet subunit beta [Source:ZFIN;Acc:ZDB-GENE-081104-406]
48. ptn ENSDARG00000102340 229 1.586 - 0.817 0.769 - - - - - - pleiotrophin [Source:ZFIN;Acc:ZDB-GENE-030624-1]
49. sh3bp4 ENSDARG00000030104, ENSDARG00000109621 51 1.583 - - - - - 0.751 0.832 - - SH3-domain binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-081104-509]
50. ccdc127a 39 1.574 - - 0.742 - - - 0.832 - - coiled-coil domain containing 127a, transcript variant X2
51. VPS37B ENSDARG00000039319, ENSDARG00000109293 150 1.567 - 0.755 - - - 0.812 - - - vacuolar protein sorting 37 homolog B (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060526-254]
52. bbc3 ENSDARG00000069282 79 1.564 - 0.846 - - - 0.718 - - - BCL2 binding component 3 [Source:ZFIN;Acc:ZDB-GENE-070119-4]
53. rx3 ENSDARG00000052893 43 1.56 - - - 0.727 - - 0.833 - - retinal homeobox gene 3 [Source:ZFIN;Acc:ZDB-GENE-990415-238]
54. si:ch73-167f18.3 si:ch73-167f18.3 78 1.549 - 0.798 - - - 0.751 - - -
55. rps6kal ENSDARG00000037574, ENSDARG00000115099 294 1.539 - 0.825 0.714 - - - - - - ribosomal protein S6 kinase a, like [Source:ZFIN;Acc:ZDB-GENE-030131-9616]
56. slco5a1 slco5a1 383 1.534 0.703 - - - - - 0.831 - -
57. PXMP4 ENSDARG00000114885 212 1.517 - 0.777 - - - - 0.740 - - peroxisomal membrane protein 4 [Source:HGNC Symbol;Acc:HGNC:15920]
58. asic1b ENSDARG00000101866 61 1.503 - - 0.784 - - - - 0.719 - acid-sensing (proton-gated) ion channel 1b [Source:ZFIN;Acc:ZDB-GENE-040513-1]
59. CABZ01068473.1 CABZ01068473.1 67 1.488 - 0.716 0.772 - - - - - -
60. tmem107l ENSDARG00000088398, ENSDARG00000109909 208 1.488 - 0.752 - - - - 0.736 - - transmembrane protein 107 like [Source:ZFIN;Acc:ZDB-GENE-090313-269]
61. CU469544.1 CU469544.1 219 1.487 - 0.770 0.717 - - - - - -
62. ZNF800 ZNF800 72 1.48 - 0.743 - - - 0.737 - - -
63. CABZ01080142.1 CABZ01080142.1 52 1.479 0.773 - - - - - 0.706 - -
64. trhrb ENSDARG00000036159 11 1.463 - - - - - 0.715 0.748 - - thyrotropin-releasing hormone receptor b [Source:ZFIN;Acc:ZDB-GENE-060503-382]
65. si:dkeyp-86f8.2 si:dkeyp-86f8.2 5 1 - - - - - 1.000 - - -
66. ccdc78 ENSDARG00000030095 8 1 - - - - - 1.000 - - - coiled-coil domain containing 78 [Source:ZFIN;Acc:ZDB-GENE-060301-1]
67. si:dkey-231k6.6 si:dkey-231k6.6 2 1 - - - - - 1.000 - - -
68. SLC22A13 SLC22A13 1 1 - - - - - 1.000 - - -
69. CABZ01057928.1 ENSDARG00000115082 1 1 - - - - - 1.000 - - - protein diaphanous homolog 1-like [Source:NCBI gene;Acc:101882228]
70. rxfp3.2b ENSDARG00000061846, ENSDARG00000109402 1 1 - - - - - 1.000 - - - relaxin family peptide receptor 3.2b [Source:ZFIN;Acc:ZDB-GENE-050208-346]
71. CR631122.1 ENSDARG00000044534 8 1 - - - - - 1.000 - - - protein RD3-like [Source:NCBI gene;Acc:100149591]
72. ZNF608 3 1 - - - - - 1.000 - - - zinc finger protein 608, transcript variant X2
73. kcnq1 ENSDARG00000059798 11 1 - - - - - 1.000 - - - potassium voltage-gated channel, KQT-like subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-061214-5]
74. si:dkey-24p1.6 ENSDARG00000028784, ENSDARG00000097212 23 1 - - - - - 1.000 - - - si:dkey-24p1.6 [Source:ZFIN;Acc:ZDB-GENE-060503-67]
75. s1pr5b ENSDARG00000052192 52 1 - - - - - 1.000 - - - sphingosine-1-phosphate receptor 5b [Source:ZFIN;Acc:ZDB-GENE-061201-27]
76. or111-4 ENSDARG00000088846 1 1 - - - - - 1.000 - - - odorant receptor, family D, subfamily 111, member 4 [Source:ZFIN;Acc:ZDB-GENE-010308-16]
77. upp2 ENSDARG00000036833 1 1 - - - - - 1.000 - - - uridine phosphorylase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-830]
78. si:ch211-117m20.4 ENSDARG00000094286 7 1 - - - - - 1.000 - - - si:ch211-117m20.4 [Source:ZFIN;Acc:ZDB-GENE-060526-20]
79. cnga4 ENSDARG00000069383 6 1 - - - - - 1.000 - - - cyclic nucleotide gated channel alpha 4 [Source:ZFIN;Acc:ZDB-GENE-070912-292]
80. tlr5a ENSDARG00000044415 3 1 - - - - - 1.000 - - - toll-like receptor 5a [Source:ZFIN;Acc:ZDB-GENE-040219-14]
81. CU694254.1 CU694254.1 4 1 - - - - - 1.000 - - -
82. HIST2H4A HIST2H4A 33 1 - - - - - 1.000 - - -
83. BX119910.9 BX119910.9 7 1 - - - - - 1.000 - - -
84. TAPBP TAPBP 1 1 - - - - - 1.000 - - -
85. si:ch211-141e20.6 si:ch211-141e20.6 25 1 - - - - - 1.000 - - -
86. olfcg1 ENSDARG00000104552, ENSDARG00000116427 1 1 - - - - - 1.000 - - - olfactory receptor C family, g1 [Source:ZFIN;Acc:ZDB-GENE-060503-630]
87. CABZ01071177.1 CABZ01071177.1 1 1 - - - - - 1.000 - - -
88. CU062628.1 ENSDARG00000090267 3 1 - - - - - 1.000 - - - trypsin-2-like [Source:NCBI gene;Acc:103908930]
89. hormad1 ENSDARG00000040254 12 1 - - - - - 1.000 - - - HORMA domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040718-49]
90. U8_1 U8_1 2 1 - - - - - 1.000 - - -
91. zgc:194275 ENSDARG00000074014 130 1 - - - - - 1.000 - - - zgc:194275 [Source:ZFIN;Acc:ZDB-GENE-081022-92]
92. foxl2 61 1 - - - - - 1.000 - - - forkhead box L2, transcript variant X1
93. crfb16 ENSDARG00000075181 40 1 - - - - - 1.000 - - - cytokine receptor family member B16 [Source:ZFIN;Acc:ZDB-GENE-071120-9]
94. prlrb ENSDARG00000045955 12 1 - - - - - 1.000 - - - prolactin receptor b [Source:ZFIN;Acc:ZDB-GENE-070705-155]
95. cyp27a1.2 ENSDARG00000069186 10 1 - - - - - 1.000 - - - cytochrome P450, family 27, subfamily A, polypeptide 1, gene 2 [Source:ZFIN;Acc:ZDB-GENE-081104-511]
96. GPR78 GPR78 17 1 - - - - - 1.000 - - -
97. si:dkey-26g8.11 si:dkey-26g8.11 4 1 - - - - - 1.000 - - -
98. casd1 ENSDARG00000023900 12 1 - - - - - 1.000 - - - CAS1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-329]
99. BX927349.1 ENSDARG00000097041 1 1 - - - - - 1.000 - - - si:dkey-84k15.7 [Source:NCBI gene;Acc:103909075]
100. sema3bl ENSDARG00000007560, ENSDARG00000110211 30 1 - - - - - 1.000 - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3bl [Source:ZFIN;Acc:ZDB-GENE-030131-2956]

There are 1380 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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