Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-196h16.4

Gene Name Gene ID Reads Annotation
si:ch211-196h16.4 ENSDARG00000094782 0 si:ch211-196h16.4 [Source:ZFIN;Acc:ZDB-GENE-081029-1]










Genes with expression patterns similar to si:ch211-196h16.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:rp71-1h20.2 si:rp71-1h20.2 0 1 - - 1.000 - - - - - -
2. STOX2 STOX2 0 1 - - 1.000 - - - - - -
3. CU695076.1 CU695076.1 7 1 - - 1.000 - - - - - -
4. U4_1 U4_1 2 1 - - 1.000 - - - - - -
5. zgc:174642_2 zgc:174642_2 1 1 - - 1.000 - - - - - -
6. pcdh2g12 5 1 - - 1.000 - - - - - - protocadherin 2 gamma 12
7. si:ch211-215m21.27 si:ch211-215m21.27 3 1 - - 1.000 - - - - - -
8. CABZ01012080.1 CABZ01012080.1 10 1 - - 1.000 - - - - - -
9. si:ch211-196h16.4 ENSDARG00000094782 0 1 - - 1.000 - - - - - - si:ch211-196h16.4 [Source:ZFIN;Acc:ZDB-GENE-081029-1]
10. mxd ENSDARG00000023369 8 1 - - 1.000 - - - - - - myxovirus (influenza virus) resistance D [Source:ZFIN;Acc:ZDB-GENE-030721-8]
11. CR626884.3 ENSDARG00000104648 1 1 - - 1.000 - - - - - -
12. CR536621.1 CR536621.1 2 1 - - 1.000 - - - - - -
13. si:dkeyp-34c12.1 ENSDARG00000071083, ENSDARG00000113229 6 1 - - 1.000 - - - - - - si:dkeyp-34c12.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5347]
14. CABZ01088508.1 CABZ01088508.1 0 1 - - 1.000 - - - - - -
15. abhd10a ENSDARG00000076435 3 1 - - 1.000 - - - - - - abhydrolase domain containing 10a [Source:ZFIN;Acc:ZDB-GENE-060526-144]
16. si:ch211-181l5.5 si:ch211-181l5.5 0 1 - - 1.000 - - - - - -
17. STRC ENSDARG00000105391 10 1 - - 1.000 - - - - - - stereocilin [Source:ZFIN;Acc:ZDB-GENE-160114-58]
18. panx3 ENSDARG00000004627 7 1 - - 1.000 - - - - - - pannexin 3 [Source:ZFIN;Acc:ZDB-GENE-091204-114]
19. syne2a_1 0 1 - - 1.000 - - - - - - spectrin repeat containing, nuclear envelope 2a
20. nudt13 ENSDARG00000057417, ENSDARG00000115835 46 1 - - 1.000 - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 13 [Source:ZFIN;Acc:ZDB-GENE-040724-60]
21. tyro3 ENSDARG00000005356 4 1 - - 1.000 - - - - - - TYRO3 protein tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-990714-13]
22. GARNL3 GARNL3 1 1 - - 1.000 - - - - - -
23. FHDC1 ENSDARG00000074812 2 1 - - 1.000 - - - - - - FH2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040826-4]
24. PEG3_36 PEG3_36 3 1 - - 1.000 - - - - - -
25. RASAL1 0 1 - - 1.000 - - - - - - RAS protein activator like 1
26. HTRA2_8 HTRA2_8 0 1 - - 1.000 - - - - - -
27. si:dkey-188i13.8 ENSDARG00000092725 1 1 - - 1.000 - - - - - - si:dkey-188i13.8 [Source:ZFIN;Acc:ZDB-GENE-090312-93]
28. ttc6 ENSDARG00000104125 7 1 - - 1.000 - - - - - - tetratricopeptide repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-090429-2]
29. CACNA2D1_1 ENSDARG00000073752 2 1 - - 1.000 - - - - - - calcium voltage-gated channel auxiliary subunit alpha2delta 1 [Source:HGNC Symbol;Acc:HGNC:1399]
30. CCDC171 ENSDARG00000027381 3 1 - - 1.000 - - - - - - coiled-coil domain containing 171 [Source:ZFIN;Acc:ZDB-GENE-110411-270]
31. si:dkeyp-68a7.5 si:dkeyp-68a7.5 6 1 - - 1.000 - - - - - -
32. BX927253.1 ENSDARG00000096072 1 1 - - 1.000 - - - - - -
33. pou4f3 ENSDARG00000006206 8 1 - - 1.000 - - - - - - POU class 4 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-24]
34. nkd3_1 ENSDARG00000013174, ENSDARG00000069984, ENSDARG00000086218, ENSDARG00000096278 1 1 - - 1.000 - - - - - - naked cuticle homolog 3 [Source:ZFIN;Acc:ZDB-GENE-060503-63]
35. hsf5 ENSDARG00000104686 9 1 - - 1.000 - - - - - - heat shock transcription factor family member 5 [Source:ZFIN;Acc:ZDB-GENE-070410-42]
36. CABZ01087111.1 CABZ01087111.1 42 1 - - 1.000 - - - - - -
37. hbaa2 ENSDARG00000069735 10 1 - - 1.000 - - - - - - hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
38. si:dkey-211e20.3 si:dkey-211e20.3 1 1 - - 1.000 - - - - - -
39. CU468041.1 ENSDARG00000092125 1 1 - - 1.000 - - - - - -
40. si:dkey-148a12.2 si:dkey-148a12.2 1 1 - - 1.000 - - - - - -
41. zgc:174311 zgc:174311 3 1 - - 1.000 - - - - - -
42. si:dkey-16j24.1 2 1 - - 1.000 - - - - - - si:dkey-16j24.1, transcript variant X1
43. CU138503.2 CU138503.2 0 1 - - 1.000 - - - - - -
44. si:dkey-165g20.2 si:dkey-165g20.2 3 1 - - 1.000 - - - - - -
45. si:rp71-7l19.7 si:rp71-7l19.7 1 1 - - 1.000 - - - - - -
46. si:dkey-26i24.1 ENSDARG00000102673 4 1 - - 1.000 - - - - - - si:dkey-26i24.1 [Source:ZFIN;Acc:ZDB-GENE-110913-88]
47. fn3krp ENSDARG00000098208 4 1 - - 1.000 - - - - - - fructosamine 3 kinase related protein [Source:ZFIN;Acc:ZDB-GENE-041010-192]
48. gata2b ENSDARG00000009094 16 1 - - 1.000 - - - - - - GATA binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-040718-440]
49. si:ch211-285c6.2 ENSDARG00000079234 1 1 - - 1.000 - - - - - - si:ch211-285c6.2 [Source:ZFIN;Acc:ZDB-GENE-040724-168]
50. CR356247.1 CR356247.1 2 1 - - 1.000 - - - - - -
51. KCNJ3_1 KCNJ3_1 30 1 - - 1.000 - - - - - -
52. si:ch73-36i7.2 si:ch73-36i7.2 5 1 - - 1.000 - - - - - -
53. CR855307.2 CR855307.2 1 1 - - 1.000 - - - - - -
54. zgc:162322 zgc:162322 1 1 - - 1.000 - - - - - -
55. si:ch211-274f20.4 si:ch211-274f20.4 0 1 - - 1.000 - - - - - -
56. ralgps1 ENSDARG00000068370 39 1 - - 1.000 - - - - - - Ral GEF with PH domain and SH3 binding motif 1 [Source:ZFIN;Acc:ZDB-GENE-070720-16]
57. si:dkey-191j3.2 ENSDARG00000101997 1 1 - - 1.000 - - - - - - si:dkey-191j3.2 [Source:ZFIN;Acc:ZDB-GENE-081103-55]
58. CABZ01079302.1 ENSDARG00000103230 2 1 - - 1.000 - - - - - -
59. SNORA53 SNORA53 10 1 - - 1.000 - - - - - -
60. zgc:114037_5 6 1 - - 1.000 - - - - - - zgc:114037
61. kcnq3 ENSDARG00000060085 0 1 - - 1.000 - - - - - - potassium voltage-gated channel, KQT-like subfamily, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-301]
62. ANO2 ENSDARG00000101363 1 1 - - 1.000 - - - - - - anoctamin 2 [Source:ZFIN;Acc:ZDB-GENE-060503-62]
63. si:dkey-164k14.1 si:dkey-164k14.1 5 1 - - 1.000 - - - - - -
64. asb13a.2 ENSDARG00000045765, ENSDARG00000109879 8 1 - - 1.000 - - - - - - ankyrin repeat and SOCS box containing 13a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-041210-88]
65. si:ch211-276k2.2 4 1 - - 1.000 - - - - - - si:ch211-276k2.2
66. PSKH2 PSKH2 1 1 - - 1.000 - - - - - -
67. BEGAIN_1 BEGAIN_1 7 1 - - 1.000 - - - - - -
68. si:dkeyp-117h8.10 si:dkeyp-117h8.10 16 1 - - 1.000 - - - - - -
69. apba1a ENSDARG00000103848 0 1 - - 1.000 - - - - - - amyloid beta (A4) precursor protein-binding, family A, member 1a [Source:ZFIN;Acc:ZDB-GENE-060526-175]
70. FP340264.1 FP340264.1 0 1 - - 1.000 - - - - - -
71. PEG3_14 PEG3_14 2 1 - - 1.000 - - - - - -
72. si:dkeyp-11g8.3 si:dkeyp-11g8.3 20 1 - - 1.000 - - - - - -
73. sez6a ENSDARG00000100876 35 1 - - 1.000 - - - - - - seizure related 6 homolog a [Source:ZFIN;Acc:ZDB-GENE-030131-8208]
74. BX119910.13 BX119910.13 4 1 - - 1.000 - - - - - -
75. plekha7b ENSDARG00000062220, ENSDARG00000110462 11 1 - - 1.000 - - - - - - pleckstrin homology domain containing, family A member 7b [Source:ZFIN;Acc:ZDB-GENE-091014-2]
76. nog3 ENSDARG00000053528, ENSDARG00000116141, ENSDARG00000116361 1 1 - - 1.000 - - - - - - noggin 3 [Source:ZFIN;Acc:ZDB-GENE-990714-8]
77. mir150 ENSDARG00000081593 4 1 - - 1.000 - - - - - - microRNA 150 [Source:NCBI gene;Acc:100033674]
78. 5S_rRNA_19 5S_rRNA_19 1 1 - - 1.000 - - - - - -
79. si:ch211-201b11.3 si:ch211-201b11.3 2 1 - - 1.000 - - - - - -
80. chrna4 chrna4 3 1 - - 1.000 - - - - - -
81. mir124-1 10 1 - - 1.000 - - - - - - microRNA 124-1
82. FGFBP1 FGFBP1 7 1 - - 1.000 - - - - - -
83. tusc3 ENSDARG00000078854 4 1 - - 1.000 - - - - - - tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
84. cabp7b ENSDARG00000060846 5 1 - - 1.000 - - - - - - calcium binding protein 7b [Source:ZFIN;Acc:ZDB-GENE-060526-366]
85. iffo2a ENSDARG00000062101, ENSDARG00000111078 0 1 - - 1.000 - - - - - - intermediate filament family orphan 2a [Source:ZFIN;Acc:ZDB-GENE-090313-342]
86. CR548630.2 CR548630.2 1 1 - - 1.000 - - - - - -
87. si:dkey-177p2.15p si:dkey-177p2.15p 20 1 - - 1.000 - - - - - -
88. SNORA65 SNORA65 1 1 - - 1.000 - - - - - -
89. SNORD12_1 SNORD12_1 0 1 - - 1.000 - - - - - -
90. b3gnt9 ENSDARG00000041616 0 1 - - 1.000 - - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9 [Source:ZFIN;Acc:ZDB-GENE-060503-611]
91. unc5da ENSDARG00000092722 8 1 - - 1.000 - - - - - - unc-5 netrin receptor Da [Source:ZFIN;Acc:ZDB-GENE-080908-2]
92. U1_7 U1_7 0 1 - - 1.000 - - - - - -
93. rac1l ENSDARG00000054649, ENSDARG00000096549 2 1 - - 1.000 - - - - - - Rac family small GTPase 1, like [Source:ZFIN;Acc:ZDB-GENE-060315-6]
94. dlg3 ENSDARG00000076796, ENSDARG00000111101 2 1 - - 1.000 - - - - - - discs, large homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050208-93]
95. si:dkey-11f4.20 ENSDARG00000100887 38 1 - - 1.000 - - - - - - si:dkey-11f4.20 [Source:ZFIN;Acc:ZDB-GENE-070912-359]
96. bricd5 ENSDARG00000056247 1 1 - - 1.000 - - - - - - BRICHOS domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-050208-85]
97. ZNF70_7 ZNF70_7 0 1 - - 1.000 - - - - - -
98. INPP5A 1 1 - - 1.000 - - - - - - inositol polyphosphate-5-phosphatase A
99. si:ch211-178j18.2 si:ch211-178j18.2 1 1 - - 1.000 - - - - - -
100. CABZ01072856.1 CABZ01072856.1 0 1 - - 1.000 - - - - - -

There are 62 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA