Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-196f5.9

Gene Name Gene ID Reads Annotation
si:ch211-196f5.9 ENSDARG00000096451 70 si:ch211-196f5.9 [Source:ZFIN;Acc:ZDB-GENE-120709-32]










Genes with expression patterns similar to si:ch211-196f5.9

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-196f5.9 ENSDARG00000096451 70 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-196f5.9 [Source:ZFIN;Acc:ZDB-GENE-120709-32]
2. nmnat1 ENSDARG00000105748 102 1.786 - 0.894 - 0.892 - - - - - nicotinamide nucleotide adenylyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-101]
3. atp2b1b ENSDARG00000007788 56 1.771 - - - 0.872 - 0.899 - - - ATPase plasma membrane Ca2+ transporting 1b [Source:ZFIN;Acc:ZDB-GENE-080409-1]
4. mei4 ENSDARG00000043912 10 1.737 - - - 0.867 - 0.870 - - - meiosis-specific, MEI4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040724-211]
5. rfxank ENSDARG00000016730 12 1.725 - 0.855 - - - 0.870 - - - regulatory factor X-associated ankyrin-containing protein [Source:ZFIN;Acc:ZDB-GENE-050208-596]
6. ARHGAP42 ARHGAP42 53 1.657 - - - 0.852 - 0.805 - - -
7. DRAXIN ENSDARG00000058256, ENSDARG00000111676 152 1.62 - - - - - 0.870 0.750 - - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
8. amh ENSDARG00000014357 15 1.618 - - - 0.865 - 0.753 - - - anti-Mullerian hormone [Source:ZFIN;Acc:ZDB-GENE-050706-192]
9. C8H1orf228 C8H1orf228 72 1.617 - - - - - 0.870 0.747 - -
10. CR790368.1 ENSDARG00000100936 20 1.609 - - - 0.868 - - - 0.741 - uncharacterized LOC110440102 [Source:NCBI gene;Acc:110440102]
11. acap3b ENSDARG00000099240 24 1.608 - 0.855 - - - 0.753 - - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 3b [Source:ZFIN;Acc:ZDB-GENE-070209-274]
12. mhc1zaa_1 ENSDARG00000092162 27 1.605 - 0.855 - - - - 0.750 - - major histocompatibility complex class I ZAA [Source:ZFIN;Acc:ZDB-GENE-030916-1]
13. gbgt1l3 ENSDARG00000035555, ENSDARG00000091969 91 1.604 - 0.855 - - - - 0.749 - - globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 3 [Source:ZFIN;Acc:ZDB-GENE-040912-46]
14. si:dkey-15h8.13 si:dkey-15h8.13 3 1.604 - 0.855 - - - - 0.749 - -
15. camk1db ENSDARG00000017446 47 1.602 - - - 0.853 - - 0.749 - - calcium/calmodulin-dependent protein kinase 1Db [Source:ZFIN;Acc:ZDB-GENE-070112-1872]
16. poln ENSDARG00000103961, ENSDARG00000113911 57 1.591 - 0.765 - - - 0.826 - - - polymerase (DNA directed) nu [Source:ZFIN;Acc:ZDB-GENE-100917-1]
17. BX004873.2 BX004873.2 19 1.59 - 0.855 - - - - 0.735 - -
18. nudt18 ENSDARG00000041576 61 1.583 - - - - - 0.870 0.713 - - nudix (nucleoside diphosphate linked moiety X)-type motif 18 [Source:ZFIN;Acc:ZDB-GENE-050417-388]
19. tgm2l ENSDARG00000093381 218 1.576 - - - 0.823 - - 0.753 - - transglutaminase 2, like [Source:ZFIN;Acc:ZDB-GENE-050420-97]
20. lbx1b ENSDARG00000018611 399 1.566 - - - 0.821 - - 0.745 - - ladybird homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050309-27]
21. ECT2L 39 1.562 - 0.757 - - - 0.805 - - - epithelial cell transforming 2 like, transcript variant X4
22. si:ch211-225b11.4 ENSDARG00000093563 42 1.549 - - - 0.807 - - 0.742 - - si:ch211-225b11.4 [Source:ZFIN;Acc:ZDB-GENE-060526-114]
23. zfpm2a ENSDARG00000040123 46 1.548 - 0.799 - - - - 0.749 - - zinc finger protein, FOG family member 2a [Source:ZFIN;Acc:ZDB-GENE-060130-4]
24. Mar-01 Mar-01 176 1.531 - 0.721 - - - - 0.810 - -
25. scamp1 ENSDARG00000036911 103 1.53 - 0.814 - - - - 0.716 - - secretory carrier membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1803]
26. zgc:113294 ENSDARG00000032285 132 1.51 - - - 0.720 - - 0.790 - - zgc:113294 [Source:ZFIN;Acc:ZDB-GENE-050320-124]
27. TMEM182 TMEM182 78 1.507 - 0.749 - - - - 0.758 - -
28. si:ch211-274p24.4 ENSDARG00000087088 36 1.507 - 0.741 - - - 0.766 - - - si:ch211-274p24.4 [Source:ZFIN;Acc:ZDB-GENE-091204-337]
29. frzb ENSDARG00000018383 93 1.492 - 0.757 - - - 0.735 - - - frizzled related protein [Source:ZFIN;Acc:ZDB-GENE-990715-1]
30. C4H12orf55 C4H12orf55 14 1.49 - - - - - - 0.749 0.741 -
31. si:ch211-209f23.3 ENSDARG00000095607 15 1.483 - 0.767 - - - 0.716 - - - si:ch211-209f23.3 [Source:ZFIN;Acc:ZDB-GENE-100921-45]
32. nphp1 ENSDARG00000009046, ENSDARG00000113790 104 1.45 - - - 0.716 - - 0.734 - - nephronophthisis 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1234]
33. prkag3b ENSDARG00000000369 1945 1.45 - 0.700 - - - - 0.750 - - protein kinase, AMP-activated, gamma 3b non-catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-060421-6938]
34. CDR2_1 CDR2_1 8 1 - 1.000 - - - - - - -
35. CR318595.2 CR318595.2 17 1 - 1.000 - - - - - - -
36. si:ch211-135f11.1 166 1 - 1.000 - - - - - - - si:ch211-135f11.1, transcript variant X3
37. myo15aa ENSDARG00000075292 29 0.975 - 0.975 - - - - - - - myosin XVAa [Source:ZFIN;Acc:ZDB-GENE-080425-2]
38. si:ch1073-181h11.4 ENSDARG00000098347 86 0.949 - - - - - 0.949 - - - si:ch1073-181h11.4 [Source:ZFIN;Acc:ZDB-GENE-091204-426]
39. CR376848.1 ENSDARG00000115549 149 0.949 - - - - - 0.949 - - - neutral cholesterol ester hydrolase 1-like [Source:NCBI gene;Acc:797436]
40. CABZ01022575.2 CABZ01022575.2 83 0.949 - - - - - 0.949 - - -
41. fads2 ENSDARG00000019532 152 0.942 - 0.942 - - - - - - - fatty acid desaturase 2 [Source:ZFIN;Acc:ZDB-GENE-011212-1]
42. CABZ01036951.1 CABZ01036951.1 71 0.942 - 0.942 - - - - - - -
43. MEP1B ENSDARG00000037533, ENSDARG00000115538 10 0.942 - 0.942 - - - - - - - meprin A, beta [Source:ZFIN;Acc:ZDB-GENE-041014-209]
44. Mar-08 Mar-08 52 0.942 - 0.942 - - - - - - -
45. PEG3_12 PEG3_12 128 0.938 - - - - - 0.938 - - -
46. rrnad1 ENSDARG00000089033 69 0.923 - - - - - 0.923 - - - ribosomal RNA adenine dimethylase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050522-515]
47. chst14 ENSDARG00000043011 345 0.921 - - - 0.921 - - - - - carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14 [Source:ZFIN;Acc:ZDB-GENE-040401-3]
48. si:dkey-91i10.2 ENSDARG00000074034 334 0.914 - - - - - - 0.914 - - si:dkey-91i10.2 [Source:ZFIN;Acc:ZDB-GENE-050208-441]
49. tpgs2 ENSDARG00000011926 48 0.913 - 0.913 - - - - - - - tubulin polyglutamylase complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040704-49]
50. fam98a ENSDARG00000078391, ENSDARG00000109752, ENSDARG00000110498 997 0.907 - - - - - - 0.907 - - family with sequence similarity 98, member A [Source:ZFIN;Acc:ZDB-GENE-091202-6]
51. SPAG17 SPAG17 31 0.899 - - - - - 0.899 - - -
52. pcsk9 ENSDARG00000074185 8 0.899 - - - - - 0.899 - - - proprotein convertase subtilisin/kexin type 9 [Source:ZFIN;Acc:ZDB-GENE-060927-1]
53. HIST1H2BA_1 ENSDARG00000116654 37 0.899 - - - - - 0.899 - - - histone cluster 1 H2B family member a [Source:HGNC Symbol;Acc:HGNC:18730]
54. CT027705.3 CT027705.3 9 0.899 - - - - - 0.899 - - -
55. wu:fb39e10 wu:fb39e10 23 0.899 - - - - - 0.899 - - -
56. sst2 ENSDARG00000014190 617 0.899 - - - - - 0.899 - - - somatostatin 2 [Source:ZFIN;Acc:ZDB-GENE-010219-2]
57. si:dkey-238m4.1 si:dkey-238m4.1 71 0.899 - - - - - 0.899 - - -
58. ankrd37 ENSDARG00000056376 131 0.899 - - - - - 0.899 - - - ankyrin repeat domain 37 [Source:ZFIN;Acc:ZDB-GENE-070308-1]
59. adat1 ENSDARG00000061348 62 0.894 - 0.894 - - - - - - - adenosine deaminase, tRNA-specific 1 [Source:ZFIN;Acc:ZDB-GENE-070410-64]
60. igfbp6b ENSDARG00000090833 37 0.894 - 0.894 - - - - - - - insulin-like growth factor binding protein 6b [Source:ZFIN;Acc:ZDB-GENE-090521-2]
61. BSCL2 ENSDARG00000037008 689 0.893 - - - - - - 0.893 - - Berardinelli-Seip congenital lipodystrophy 2 (seipin) [Source:ZFIN;Acc:ZDB-GENE-051113-140]
62. MRS2 ENSDARG00000062872 236 0.892 - 0.892 - - - - - - - MRS2 magnesium transporter [Source:ZFIN;Acc:ZDB-GENE-141211-29]
63. nfkbil1 ENSDARG00000003157 78 0.892 - 0.892 - - - - - - - nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1 [Source:ZFIN;Acc:ZDB-GENE-040116-7]
64. si:ch211-122l24.4_1 si:ch211-122l24.4_1 53 0.889 - - - - - 0.889 - - -
65. casz1 ENSDARG00000037030 85 0.888 - - - - - - 0.888 - - castor zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-060130-108]
66. fam151b ENSDARG00000020024 255 0.887 - - - - - 0.887 - - - family with sequence similarity 151, member B [Source:ZFIN;Acc:ZDB-GENE-040801-38]
67. pif1 ENSDARG00000020289 216 0.886 - - - - - 0.886 - - - PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-4928]
68. cbsa ENSDARG00000053500, ENSDARG00000112676 792 0.886 - - - - - - 0.886 - - cystathionine-beta-synthase a [Source:ZFIN;Acc:ZDB-GENE-050417-367]
69. scara5 ENSDARG00000010425 84 0.885 - 0.885 - - - - - - - scavenger receptor class A, member 5 (putative) [Source:ZFIN;Acc:ZDB-GENE-041210-258]
70. scara3 ENSDARG00000008060 169 0.885 - - - - - - 0.885 - - scavenger receptor class A, member 3 [Source:ZFIN;Acc:ZDB-GENE-041014-317]
71. rassf4 ENSDARG00000012460 43 0.884 - - - 0.884 - - - - - Ras association (RalGDS/AF-6) domain family member 4 [Source:ZFIN;Acc:ZDB-GENE-050102-3]
72. si:ch211-286b5.9 ENSDARG00000086166 27 0.881 - - - - - 0.881 - - - si:ch211-286b5.9 [Source:ZFIN;Acc:ZDB-GENE-121214-63]
73. dmtf1 ENSDARG00000025824, ENSDARG00000109819, ENSDARG00000110011 364 0.877 - 0.877 - - - - - - - cyclin D binding myb-like transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-040718-413]
74. si:ch211-224b1.5 si:ch211-224b1.5 139 0.877 - - - - - - 0.877 - -
75. zgc:162358 zgc:162358 104 0.875 - 0.875 - - - - - - -
76. gpr22 gpr22 115 0.871 - - - 0.871 - - - - -
77. bmf2 ENSDARG00000041414, ENSDARG00000116024 18 0.87 - - - - - 0.870 - - - BCL2 modifying factor 2 [Source:ZFIN;Acc:ZDB-GENE-041210-319]
78. mbpa ENSDARG00000036186 4 0.87 - - - - - 0.870 - - - myelin basic protein a [Source:ZFIN;Acc:ZDB-GENE-030128-2]
79. C12H7orf62 C12H7orf62 2 0.87 - - - - - 0.870 - - -
80. mcf2b ENSDARG00000056603, ENSDARG00000097371 1 0.87 - - - - - 0.870 - - - MCF.2 cell line derived transforming sequence b [Source:ZFIN;Acc:ZDB-GENE-091118-4]
81. si:ch211-154o6.3_1 ENSDARG00000099846, ENSDARG00000112144 10 0.87 - - - - - 0.870 - - - si:ch211-154o6.3 [Source:ZFIN;Acc:ZDB-GENE-030131-1030]
82. ZNFX1 ENSDARG00000100280 118 0.87 - - - - - 0.870 - - - zinc finger, NFX1-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-110804-2]
83. cyp46a4 cyp46a4 5 0.87 - - - - - 0.870 - - -
84. CCDC37 CCDC37 10 0.87 - - - - - 0.870 - - -
85. mhc1uba ENSDARG00000075963 31 0.87 - - - - - 0.870 - - - major histocompatibility complex class I UBA [Source:ZFIN;Acc:ZDB-GENE-990415-145]
86. Metazoa_SRP_15 Metazoa_SRP_15 2 0.87 - - - - - 0.870 - - -
87. si:ch211-76m11.15 ENSDARG00000098979 6 0.87 - - - - - 0.870 - - - si:ch211-76m11.15 [Source:ZFIN;Acc:ZDB-GENE-110411-136]
88. slc25a38a ENSDARG00000059805 236 0.87 - - - - - 0.870 - - - solute carrier family 25, member 38a [Source:ZFIN;Acc:ZDB-GENE-060929-320]
89. ldhbb ENSDARG00000071076 31 0.87 - - - - - 0.870 - - - lactate dehydrogenase Bb [Source:ZFIN;Acc:ZDB-GENE-040718-176]
90. si:dkey-15h8.7 si:dkey-15h8.7 43 0.87 - - - - - 0.870 - - -
91. PCBP3 ENSDARG00000054378 17 0.87 - - - - - 0.870 - - - poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]
92. BX323882.1 ENSDARG00000101656 2 0.87 - - - - - 0.870 - - - butyrophilin subfamily 2 member A2-like [Source:NCBI gene;Acc:563995]
93. si:dkey-66i24.10 si:dkey-66i24.10 6 0.87 - - - - - 0.870 - - -
94. RBBP6_3 RBBP6_3 34 0.87 - - - - - 0.870 - - -
95. CABZ01063789.1 CABZ01063789.1 1 0.87 - - - - - 0.870 - - -
96. CABZ01086354.1 CABZ01086354.1 22 0.87 - - - - - 0.870 - - -
97. rtn4rl1b ENSDARG00000098528 31 0.87 - - - - - 0.870 - - - reticulon 4 receptor-like 1b [Source:ZFIN;Acc:ZDB-GENE-040310-3]
98. stk35_1 ENSDARG00000086856 3 0.87 - - - - - 0.870 - - - serine/threonine kinase 35 [Source:ZFIN;Acc:ZDB-GENE-061103-553]
99. si:ch211-89o5.1 si:ch211-89o5.1 91 0.87 - - - - - 0.870 - - -
100. GRM8 GRM8 4 0.87 - - - - - 0.870 - - -

There are 1021 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA