Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-196f5.2

Gene Name Gene ID Reads Annotation
si:ch211-196f5.2 ENSDARG00000041492 29 si:ch211-196f5.2 [Source:ZFIN;Acc:ZDB-GENE-041014-306]










Genes with expression patterns similar to si:ch211-196f5.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-196f5.2 ENSDARG00000041492 29 6 - - - 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-196f5.2 [Source:ZFIN;Acc:ZDB-GENE-041014-306]
2. slc6a4b ENSDARG00000057017 18 2.561 - - - - 0.799 0.762 1.000 - - solute carrier family 6 (neurotransmitter transporter), member 4b [Source:ZFIN;Acc:ZDB-GENE-060314-2]
3. LRTM1 ENSDARG00000098742 21 1.818 - - - - 0.996 0.822 - - - leucine rich repeats and transmembrane domains 1 [Source:ZFIN;Acc:ZDB-GENE-161221-2]
4. LRRC30 LRRC30 83 1.743 - - - - - 0.822 0.921 - -
5. ENSDARG00000032477 ENSDARG00000032477 18 1.674 - - - - - 0.822 0.852 - -
6. si:dkey-25o1.5 si:dkey-25o1.5 5 1.627 - - - 0.805 - 0.822 - - -
7. clrn1 ENSDARG00000102890 5 1.627 - - - 0.805 - 0.822 - - - clarin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-420]
8. CABZ01054965.1 ENSDARG00000090844 74 1.615 - - - - 0.898 0.717 - - - interleukin-1 receptor type 1-like [Source:NCBI gene;Acc:799279]
9. tdrd9 ENSDARG00000013453 22 1.612 - - - - - 0.760 0.852 - - tudor domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-090313-193]
10. cpb1 ENSDARG00000045442, ENSDARG00000110762 22 1.61 - - - 0.805 - 0.805 - - - carboxypeptidase B1 (tissue) [Source:ZFIN;Acc:ZDB-GENE-030131-1132]
11. MCOLN2 ENSDARG00000098918 12 1.599 - - - 0.777 - 0.822 - - - mucolipin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-692]
12. tmprss4b ENSDARG00000012860 6 1.579 - - - - - 0.729 - - 0.850 transmembrane serine protease 4b [Source:ZFIN;Acc:ZDB-GENE-030131-5862]
13. cx45.6 cx45.6 26 1.559 - - - - 0.737 0.822 - - -
14. zgc:92880 zgc:92880 56 1.549 - - - - - 0.763 0.786 - -
15. CR847510.1 CR847510.1 629 1.505 - - - - - 0.781 0.724 - -
16. CR925880.1 CR925880.1 196 1.479 - - - - - 0.749 0.730 - -
17. rab3gap2 ENSDARG00000044136 4 1 - - - - 1.000 - - - - RAB3 GTPase activating protein subunit 2 (non-catalytic) [Source:ZFIN;Acc:ZDB-GENE-030616-610]
18. lrch4 ENSDARG00000068258 24 1 - - - - - - 1.000 - - leucine-rich repeats and calponin homology (CH) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060503-749]
19. atp8b1 ENSDARG00000060980 181 1 - - - - - - 1.000 - - ATPase phospholipid transporting 8B1 [Source:ZFIN;Acc:ZDB-GENE-091116-14]
20. fam178a fam178a 29 1 - - - - - - 1.000 - -
21. PEG3_24 PEG3_24 5 0.999 - - - - 0.999 - - - -
22. si:dkey-27f16.4 si:dkey-27f16.4 4 0.999 - - - - 0.999 - - - -
23. si:dkey-196n19.5 si:dkey-196n19.5 6 0.999 - - - - 0.999 - - - -
24. si:dkey-199f5.4 ENSDARG00000110483 4 0.999 - - - - 0.999 - - - - si:dkey-199f5.4 [Source:ZFIN;Acc:ZDB-GENE-100922-53]
25. impact ENSDARG00000043288 7 0.999 - - - - 0.999 - - - - impact RWD domain protein [Source:ZFIN;Acc:ZDB-GENE-040927-10]
26. si:dkeyp-9d4.2 ENSDARG00000029720 9 0.999 - - - - 0.999 - - - - si:dkeyp-9d4.2 [Source:ZFIN;Acc:ZDB-GENE-090312-156]
27. ghrh ENSDARG00000069481, ENSDARG00000111551 9 0.999 - - - - 0.999 - - - - growth hormone releasing hormone [Source:ZFIN;Acc:ZDB-GENE-070426-1]
28. rargb ENSDARG00000054003 7 0.999 - - - - 0.999 - - - - retinoic acid receptor, gamma b [Source:ZFIN;Acc:ZDB-GENE-070314-1]
29. plac8.2 ENSDARG00000094438 3 0.999 - - - - 0.999 - - - - placenta-specific 8, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070424-12]
30. b3gnt7 ENSDARG00000038489 29 0.999 - - - - 0.999 - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 [Source:ZFIN;Acc:ZDB-GENE-021210-4]
31. prpf4 ENSDARG00000067639, ENSDARG00000114457, ENSDARG00000114653 10 0.999 - - - - 0.999 - - - - PRP4 pre-mRNA processing factor 4 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-5143]
32. si:ch211-234p6.9 ENSDARG00000095730 3 0.999 - - - - 0.999 - - - - si:ch211-234p6.9 [Source:ZFIN;Acc:ZDB-GENE-060503-33]
33. crygm2d16 ENSDARG00000076790 129 0.997 - - - - 0.997 - - - - crystallin, gamma M2d16 [Source:ZFIN;Acc:ZDB-GENE-071004-53]
34. BX511006.2 BX511006.2 29 0.997 - - - - 0.997 - - - -
35. si:ch73-261i21.2 ENSDARG00000095975 9 0.997 - - - - 0.997 - - - - si:ch73-261i21.2 [Source:ZFIN;Acc:ZDB-GENE-110411-164]
36. RPS11 ENSDARG00000053058 32 0.996 - - - - 0.996 - - - - ribosomal protein S11 [Source:ZFIN;Acc:ZDB-GENE-040426-2701]
37. nfixb ENSDARG00000061836 7 0.995 - - - - 0.995 - - - - nuclear factor I/Xb [Source:ZFIN;Acc:ZDB-GENE-060421-5000]
38. zgc:86723 zgc:86723 299 0.994 - - - - 0.994 - - - -
39. foxn1 ENSDARG00000011879 22 0.993 - - - - 0.993 - - - - forkhead box N1 [Source:ZFIN;Acc:ZDB-GENE-021008-1]
40. crygm2d5 ENSDARG00000069792 207 0.989 - - - - 0.989 - - - - crystallin, gamma M2d5 [Source:ZFIN;Acc:ZDB-GENE-060918-4]
41. si:dkey-253d23.8 ENSDARG00000094427 26 0.988 - - - - 0.988 - - - - si:dkey-253d23.8 [Source:ZFIN;Acc:ZDB-GENE-050208-568]
42. BX321870.1 ENSDARG00000098519 9 0.987 - - - - 0.987 - - - -
43. RNF39 RNF39 52 0.986 - - - - 0.986 - - - -
44. nrros ENSDARG00000071491, ENSDARG00000112102 64 0.983 - - - - 0.983 - - - - negative regulator of reactive oxygen species [Source:ZFIN;Acc:ZDB-GENE-040808-36]
45. rag1 ENSDARG00000052122 13 0.982 - - - - 0.982 - - - - recombination activating gene 1 [Source:ZFIN;Acc:ZDB-GENE-990415-234]
46. U6_18 U6_18 12 0.982 - - - - 0.982 - - - -
47. C3H17orf104 C3H17orf104 16 0.981 - - - - 0.981 - - - -
48. cx30.9 ENSDARG00000070362 17 0.98 - - - - 0.980 - - - - connexin 30.9 [Source:ZFIN;Acc:ZDB-GENE-050616-2]
49. lyve1b ENSDARG00000062483 14 0.972 - - - - 0.972 - - - - lymphatic vessel endothelial hyaluronic receptor 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9516]
50. ppp1r27 ppp1r27 18 0.967 - - - - - - 0.967 - -
51. si:ch211-210h11.7 si:ch211-210h11.7 32 0.967 - - - - 0.967 - - - -
52. GABRA2 ENSDARG00000113737 5 0.964 - - - - 0.964 - - - - gamma-aminobutyric acid type A receptor alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:4076]
53. si:dkeyp-72h1.1 ENSDARG00000095347 7 0.963 - - - - 0.963 - - - - si:dkeyp-72h1.1 [Source:ZFIN;Acc:ZDB-GENE-050208-447]
54. ciz1a ENSDARG00000089781 20 0.96 - - - - 0.960 - - - - cdkn1a interacting zinc finger protein 1a [Source:ZFIN;Acc:ZDB-GENE-100922-222]
55. adcy2a ENSDARG00000058392 13 0.96 - - - - 0.960 - - - - adenylate cyclase 2a [Source:ZFIN;Acc:ZDB-GENE-061109-1]
56. tmub2 ENSDARG00000056467, ENSDARG00000109925 100 0.944 - - - - 0.944 - - - - transmembrane and ubiquitin-like domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030616-254]
57. sfr1 ENSDARG00000021974 45 0.942 - - - - 0.942 - - - - SWI5-dependent homologous recombination repair protein 1 [Source:ZFIN;Acc:ZDB-GENE-070410-27]
58. CU459084.1 CU459084.1 4 0.94 - - - - - 0.940 - - -
59. PLA2R1 ENSDARG00000077474 45 0.94 - - - - - 0.940 - - - phospholipase A2 receptor 1 [Source:ZFIN;Acc:ZDB-GENE-120323-1]
60. c4 ENSDARG00000015065 2 0.94 - - - - - 0.940 - - - complement component 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5697]
61. RAC1_2 RAC1_2 51 0.94 - - - - 0.940 - - - -
62. rergla ENSDARG00000019396 42 0.94 - - - - - 0.940 - - - RERG/RAS-like a [Source:ZFIN;Acc:ZDB-GENE-040718-198]
63. si:ch211-110e4.2 si:ch211-110e4.2 12 0.94 - - - - 0.940 - - - -
64. BX323876.4 BX323876.4 1 0.94 - - - - - 0.940 - - -
65. si:ch211-235f12.2 ENSDARG00000092119 31 0.94 - - - - - 0.940 - - - si:ch211-235f12.2 [Source:ZFIN;Acc:ZDB-GENE-050419-113]
66. CABZ01077140.1 CABZ01077140.1 2 0.94 - - - - - 0.940 - - -
67. cldn15lb ENSDARG00000100844 46 0.938 - - - - - - 0.938 - - claudin 15-like b [Source:ZFIN;Acc:ZDB-GENE-040718-145]
68. ppp1r3db ENSDARG00000076248 32 0.938 - - - - - - 0.938 - - protein phosphatase 1, regulatory subunit 3Db [Source:ZFIN;Acc:ZDB-GENE-110201-1]
69. si:dkeyp-93h6.3 si:dkeyp-93h6.3 31 0.936 - - - - 0.936 - - - -
70. fbxo15 ENSDARG00000016897 18 0.926 - - - - 0.926 - - - - F-box protein 15 [Source:ZFIN;Acc:ZDB-GENE-080416-4]
71. RPS6KL1 ENSDARG00000079024 22 0.924 - - - 0.924 - - - - - ribosomal protein S6 kinase-like 1 [Source:ZFIN;Acc:ZDB-GENE-111020-10]
72. lpar6b ENSDARG00000069441 65 0.923 - - - - 0.923 - - - - lysophosphatidic acid receptor 6b [Source:ZFIN;Acc:ZDB-GENE-110408-67]
73. ephx2 ENSDARG00000040255 105 0.919 - - - - 0.919 - - - - epoxide hydrolase 2, cytoplasmic [Source:ZFIN;Acc:ZDB-GENE-041212-70]
74. ndufaf1 ENSDARG00000025549 42 0.904 - - - - - - 0.904 - - NADH:ubiquinone oxidoreductase complex assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-050306-9]
75. CELA1_1 CELA1_1 104 0.895 - - - - - - 0.895 - -
76. MUC5AC_1 MUC5AC_1 381 0.893 - - - - 0.893 - - - -
77. CSMD3 CSMD3 0 0.891 - - - - - - 0.891 - -
78. adgra1a ENSDARG00000054177 19 0.889 - - - - - - - - 0.889 adhesion G protein-coupled receptor A1a [Source:ZFIN;Acc:ZDB-GENE-130603-101]
79. APOL4 APOL4 27 0.887 - - - - 0.887 - - - -
80. spon2b ENSDARG00000002732 115 0.882 - - - - - 0.882 - - - spondin 2b, extracellular matrix protein [Source:ZFIN;Acc:ZDB-GENE-990415-161]
81. TNNC2 ENSDARG00000070835, ENSDARG00000111155 89 0.88 - - - - - - 0.880 - - troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
82. oep oep 261 0.879 - - - - - 0.879 - - -
83. SNORD38 SNORD38 171 0.878 - - - - 0.878 - - - -
84. si:dkey-20j10.2 si:dkey-20j10.2 8 0.877 - - - - 0.877 - - - -
85. CABZ01064973.1 CABZ01064973.1 160 0.876 - - - - - - 0.876 - -
86. inaa ENSDARG00000011862 115 0.872 - - - - 0.872 - - - - internexin neuronal intermediate filament protein, alpha a [Source:ZFIN;Acc:ZDB-GENE-060531-65]
87. kitlgb ENSDARG00000058042, ENSDARG00000116557 63 0.87 - - - - 0.870 - - - - kit ligand b [Source:ZFIN;Acc:ZDB-GENE-070424-2]
88. fkbp5 ENSDARG00000028396 20 0.867 - - - - - - 0.867 - - FK506 binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-030616-630]
89. CR846080.4 CR846080.4 6 0.863 - - - - - - 0.863 - -
90. mir301c 84 0.853 - - - - - 0.853 - - - microRNA 301c
91. IAPP 2 0.852 - - - - - - 0.852 - - islet amyloid polypeptide
92. si:dkey-88n24.8 ENSDARG00000091095 9 0.852 - - - - - - 0.852 - - si:dkey-88n24.8 [Source:ZFIN;Acc:ZDB-GENE-041014-92]
93. stxbp6l ENSDARG00000028354, ENSDARG00000112083, ENSDARG00000113476 43 0.852 - - - - - - 0.852 - - syntaxin binding protein 6 (amisyn), like [Source:ZFIN;Acc:ZDB-GENE-040724-16]
94. ext1c ENSDARG00000035649 0 0.852 - - - - - - 0.852 - - exostoses (multiple) 1c [Source:ZFIN;Acc:ZDB-GENE-050211-5]
95. ompa ENSDARG00000105218 3 0.852 - - - - - - 0.852 - - olfactory marker protein a [Source:ZFIN;Acc:ZDB-GENE-050626-118]
96. CLTCL1 ENSDARG00000091618 0 0.852 - - - - - - 0.852 - - clathrin, heavy chain-like 1 [Source:ZFIN;Acc:ZDB-GENE-130530-1029]
97. si:ch211-267e7.22 si:ch211-267e7.22 34 0.852 - - - - 0.852 - - - -
98. CR382281.1 ENSDARG00000100098 135 0.852 - - - - - - 0.852 - -
99. crp1 ENSDARG00000071454 31 0.852 - - - - - - 0.852 - - C-reactive protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-314]
100. CU467828.1 CU467828.1 0 0.852 - - - - - - 0.852 - -

There are 506 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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