Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Limit to:

Results for si:ch211-194e1.8

Gene Name Gene ID Reads Annotation
si:ch211-194e1.8 si:ch211-194e1.8 14










Genes with expression patterns similar to si:ch211-194e1.8

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-194e1.8 si:ch211-194e1.8 14 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000
2. wasa ENSDARG00000015149 26 2.76 - 0.915 - - - - 1.000 - 0.845 Wiskott-Aldrich syndrome (eczema-thrombocytopenia) a [Source:ZFIN;Acc:ZDB-GENE-081104-419]
3. epb41l3b ENSDARG00000019917 9 2.658 1.000 0.802 - 0.856 - - - - - erythrocyte membrane protein band 4.1-like 3b [Source:ZFIN;Acc:ZDB-GENE-021106-1]
4. si:dkey-267i17.3 si:dkey-267i17.3 4 2 1.000 - - - - - 1.000 - -
5. cysltr1 ENSDARG00000058246, ENSDARG00000116295 25 2 1.000 - - - - - 1.000 - - cysteinyl leukotriene receptor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-250]
6. si:ch211-219a15.4 ENSDARG00000068951 3 2 1.000 - - - - - 1.000 - - si:ch211-219a15.4 [Source:ZFIN;Acc:ZDB-GENE-060503-308]
7. ifit2 ifit2 11 2 1.000 - - - - - 1.000 - -
8. CABZ01085054.1 CABZ01085054.1 20 2 1.000 - - - - - 1.000 - -
9. sycp1 ENSDARG00000003904 8 2 1.000 - - - - - 1.000 - - synaptonemal complex protein 1 [Source:ZFIN;Acc:ZDB-GENE-040910-6]
10. lyve1b ENSDARG00000062483 14 2 1.000 - - - - - 1.000 - - lymphatic vessel endothelial hyaluronic receptor 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9516]
11. ela2 ENSDARG00000056744, ENSDARG00000111667 73 2 1.000 - - - - - 1.000 - - elastase 2 [Source:ZFIN;Acc:ZDB-GENE-041117-1]
12. mb21d1 ENSDARG00000021572 12 1.958 - - - - 0.958 - 1.000 - - Mab-21 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-090313-23]
13. MAP3K13 ENSDARG00000009493 8 1.957 1.000 0.957 - - - - - - - mitogen-activated protein kinase kinase kinase 13 [Source:HGNC Symbol;Acc:HGNC:6852]
14. PLCG2 ENSDARG00000068763 11 1.957 1.000 0.957 - - - - - - - phospholipase C, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9532]
15. si:ch211-207e7.1 si:ch211-207e7.1 33 1.947 - 0.978 - - 0.969 - - - -
16. zgc:171704 ENSDARG00000018048 14 1.941 - - - - 0.941 - 1.000 - - zgc:171704 [Source:ZFIN;Acc:ZDB-GENE-070820-16]
17. ptprja ENSDARG00000033042 25 1.936 - 0.936 - 1.000 - - - - - protein tyrosine phosphatase, receptor type, J a [Source:ZFIN;Acc:ZDB-GENE-030131-8301]
18. RNaseP_nuc_1 RNaseP_nuc_1 19 1.915 - - - - 0.915 - 1.000 - -
19. pnpla4 ENSDARG00000069834, ENSDARG00000110613 15 1.905 - - - 0.905 - - 1.000 - - patatin-like phospholipase domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070410-74]
20. F2RL3 ENSDARG00000079399 29 1.883 1.000 0.883 - - - - - - - F2R like thrombin or trypsin receptor 3 [Source:HGNC Symbol;Acc:HGNC:3540]
21. cyb561 ENSDARG00000038176 55 1.876 1.000 - - - - - 0.876 - - cytochrome b561 [Source:ZFIN;Acc:ZDB-GENE-070713-3]
22. st6galnac1.2 ENSDARG00000043816 51 1.875 - 0.875 - - - - 1.000 - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-041014-161]
23. si:dkeyp-67e1.6 ENSDARG00000073947, ENSDARG00000113513, ENSDARG00000113783 20 1.864 - - - - - - 1.000 - 0.864 si:dkeyp-67e1.6 [Source:ZFIN;Acc:ZDB-GENE-061207-87]
24. muc13b ENSDARG00000079647 67 1.861 1.000 - - - - - 0.861 - - mucin 13b, cell surface associated [Source:ZFIN;Acc:ZDB-GENE-080220-61]
25. si:dkey-157g20.2 si:dkey-157g20.2 29 1.842 - 0.842 - - - - 1.000 - -
26. tnfsf12 ENSDARG00000069376, ENSDARG00000109341 49 1.831 1.000 - - 0.831 - - - - - TNF superfamily member 12 [Source:ZFIN;Acc:ZDB-GENE-060929-376]
27. gfpt1 ENSDARG00000057465 14 1.802 - 0.957 - - 0.845 - - - - glutamine--fructose-6-phosphate transaminase 1 [Source:ZFIN;Acc:ZDB-GENE-070423-1]
28. btr16 ENSDARG00000028850 21 1.802 - 0.957 - - - - - - 0.845 bloodthirsty-related gene family, member 16 [Source:ZFIN;Acc:ZDB-GENE-060929-1066]
29. si:dkeyp-51f12.2 ENSDARG00000095606 24 1.801 - - - - 0.801 - 1.000 - - si:dkeyp-51f12.2 [Source:ZFIN;Acc:ZDB-GENE-070705-546]
30. zgc:113426 ENSDARG00000051793 37 1.793 - - - - - 0.793 1.000 - - zgc:113426 [Source:ZFIN;Acc:ZDB-GENE-050913-149]
31. fgf24 ENSDARG00000037677 242 1.79 1.000 - - - - - 0.790 - - fibroblast growth factor 24 [Source:ZFIN;Acc:ZDB-GENE-030708-1]
32. rspo1 ENSDARG00000104340, ENSDARG00000111655 13 1.777 1.000 - - 0.777 - - - - - R-spondin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-44]
33. glipr1b ENSDARG00000030078 73 1.773 - - - - 0.773 - 1.000 - - GLI pathogenesis-related 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1459]
34. MAATS1 ENSDARG00000006292 59 1.759 - 0.880 - - - 0.879 - - - MYCBP-associated, testis expressed 1 [Source:ZFIN;Acc:ZDB-GENE-070912-489]
35. sod3b ENSDARG00000079183 39 1.749 1.000 0.749 - - - - - - - superoxide dismutase 3, extracellular b [Source:ZFIN;Acc:ZDB-GENE-030131-8743]
36. si:ch211-255g12.5 si:ch211-255g12.5 7 1.746 0.746 - 1.000 - - - - - -
37. ANKRD34A 22 1.746 0.746 - - - - - 1.000 - - ankyrin repeat domain 34A, transcript variant X2
38. SLC39A8 ENSDARG00000056757 52 1.744 1.000 - - - 0.744 - - - - solute carrier family 39 (zinc transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-050419-124]
39. pcmtd2 ENSDARG00000053820, ENSDARG00000113456 59 1.739 - 0.790 - - 0.949 - - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060312-14]
40. sult2st3 ENSDARG00000028367 79 1.735 1.000 0.735 - - - - - - - sulfotransferase family 2, cytosolic sulfotransferase 3 [Source:ZFIN;Acc:ZDB-GENE-061117-4]
41. opn4a ENSDARG00000022098, ENSDARG00000110010 3 1.727 - - 0.727 - - - 1.000 - - opsin 4a (melanopsin) [Source:ZFIN;Acc:ZDB-GENE-070111-2]
42. fam154b fam154b 2 1.727 - - 0.727 - - - 1.000 - -
43. si:ch211-210h11.7 si:ch211-210h11.7 32 1.72 1.000 - - - - - 0.720 - -
44. si:ch73-299h12.1 ENSDARG00000102321 233 1.72 1.000 - - - - - 0.720 - - si:ch73-299h12.1 [Source:ZFIN;Acc:ZDB-GENE-081031-84]
45. zgc:174696 ENSDARG00000110658 67 1.72 - 1.000 - - - - 0.720 - - zgc:174696 [Source:ZFIN;Acc:ZDB-GENE-030131-2836]
46. sele ENSDARG00000009123 122 1.705 1.000 - - - - 0.705 - - - selectin E [Source:ZFIN;Acc:ZDB-GENE-041014-221]
47. CABZ01033205.2 CABZ01033205.2 5 1.702 - - - 0.702 - - 1.000 - -
48. si:dkey-161j23.5 ENSDARG00000094441 11 1.676 - 0.855 - - - - - - 0.821 si:dkey-161j23.5 [Source:ZFIN;Acc:ZDB-GENE-091204-373]
49. tnmd ENSDARG00000052615 42 1.672 - 0.945 - - - 0.727 - - - tenomodulin [Source:ZFIN;Acc:ZDB-GENE-080220-31]
50. ecscr ENSDARG00000087457 319 1.661 0.886 - - - - 0.775 - - - endothelial cell surface expressed chemotaxis and apoptosis regulator [Source:ZFIN;Acc:ZDB-GENE-050411-37]
51. BAIAP2L2 BAIAP2L2 31 1.651 - - - - 0.846 - 0.805 - -
52. bag5 ENSDARG00000017316 195 1.611 0.735 0.876 - - - - - - - BCL2 associated athanogene 5 [Source:ZFIN;Acc:ZDB-GENE-050913-58]
53. srgn ENSDARG00000077069 612 1.607 0.897 0.710 - - - - - - - serglycin [Source:ZFIN;Acc:ZDB-GENE-030131-7127]
54. plod3_1 ENSDARG00000076317 80 1.607 - 0.847 - - 0.760 - - - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 [Source:ZFIN;Acc:ZDB-GENE-021031-4]
55. CR848784.2 ENSDARG00000111157 16 1.604 - 0.877 0.727 - - - - - -
56. rpph1 33 1.595 - - - 0.777 - - 0.818 - - ribonuclease P RNA component H1
57. zgc:112038 ENSDARG00000046140 73 1.576 0.746 - - - 0.830 - - - - zgc:112038 [Source:ZFIN;Acc:ZDB-GENE-050522-271]
58. malt1b malt1b 244 1.576 0.747 0.829 - - - - - - -
59. PLIN3 PLIN3 29 1.575 - - 0.846 - - 0.729 - - -
60. dync2i1 dync2i1 83 1.516 - - - - 0.771 - 0.745 - -
61. bmp3 ENSDARG00000060526, ENSDARG00000109238 54 1.509 - 0.778 - - - 0.731 - - - bone morphogenetic protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7192]
62. dnah5 ENSDARG00000087373 168 1.477 - - - - - 0.722 0.755 - - dynein, axonemal, heavy chain 5 [Source:ZFIN;Acc:ZDB-GENE-110411-177]
63. si:ch211-199g17.2 ENSDARG00000092310 243 1.465 - 0.734 - - - - 0.731 - - si:ch211-199g17.2 [Source:ZFIN;Acc:ZDB-GENE-060503-396]
64. CABZ01054965.1 ENSDARG00000090844 74 1.462 - - - - - 0.702 0.760 - - interleukin-1 receptor type 1-like [Source:NCBI gene;Acc:799279]
65. si:dkey-39a18.1 ENSDARG00000045669 599 1.456 - 0.716 - - - - 0.740 - - si:dkey-39a18.1 [Source:ZFIN;Acc:ZDB-GENE-041210-127]
66. nvl ENSDARG00000025605 497 1.414 - 0.707 - - - - 0.707 - - nuclear VCP-like [Source:ZFIN;Acc:ZDB-GENE-040426-2871]
67. mmachc ENSDARG00000043877 29 1 1.000 - - - - - - - - methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria [Source:ZFIN;Acc:ZDB-GENE-030131-3167]
68. si:dkeyp-87a6.2 ENSDARG00000093322 18 1 - - - - - - 1.000 - - si:dkeyp-87a6.2 [Source:ZFIN;Acc:ZDB-GENE-091118-57]
69. CREM_1 CREM_1 9 1 1.000 - - - - - - - -
70. FAM150A 14 1 1.000 - - - - - - - - family with sequence similarity 150 member A, transcript variant X2
71. cacnb2a ENSDARG00000099045 374 1 1.000 - - - - - - - - calcium channel, voltage-dependent, beta 2a [Source:ZFIN;Acc:ZDB-GENE-080808-7]
72. SLC2A4RG SLC2A4RG 47 1 - - - - - - 1.000 - -
73. si:ch1073-221c23.2 si:ch1073-221c23.2 17 1 - - - 1.000 - - - - -
74. tbx5b ENSDARG00000092060 37 1 1.000 - - - - - - - - T-box 5b [Source:ZFIN;Acc:ZDB-GENE-060601-2]
75. ssrp1b ENSDARG00000016994 58 1 - - - - - - 1.000 - - structure specific recognition protein 1b [Source:ZFIN;Acc:ZDB-GENE-041008-209]
76. FAM196B FAM196B 1 1 1.000 - - - - - - - -
77. si:ch211-119o8.4 ENSDARG00000075562 1 1 1.000 - - - - - - - - si:ch211-119o8.4 [Source:ZFIN;Acc:ZDB-GENE-070912-15]
78. si:dkey-117p18.2 si:dkey-117p18.2 104 1 1.000 - - - - - - - -
79. si:dkey-276l13.5 si:dkey-276l13.5 3 1 - - - - - - 1.000 - -
80. ENSDARG00000086520 ENSDARG00000086520 26 1 - 1.000 - - - - - - -
81. TAF4_1 TAF4_1 30 1 1.000 - - - - - - - -
82. vsig8a ENSDARG00000054050, ENSDARG00000114869 69 1 1.000 - - - - - - - - V-set and immunoglobulin domain containing 8a [Source:ZFIN;Acc:ZDB-GENE-050417-338]
83. zgc:153157 ENSDARG00000070423, ENSDARG00000115488 79 1 1.000 - - - - - - - - zgc:153157 [Source:ZFIN;Acc:ZDB-GENE-060825-224]
84. RNF14 ENSDARG00000043905 41 1 1.000 - - - - - - - - ring finger protein 14 [Source:ZFIN;Acc:ZDB-GENE-040625-65]
85. ASPG ENSDARG00000052942 1 1 1.000 - - - - - - - - asparaginase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-070820-14]
86. RBBP6_2 RBBP6_2 23 1 - - - - - - 1.000 - -
87. BX322792.2 ENSDARG00000117704 2 1 - - - 1.000 - - - - -
88. slc6a6b ENSDARG00000098438 7 1 1.000 - - - - - - - - solute carrier family 6 (neurotransmitter transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030131-3077]
89. UNC119 UNC119 104 1 - - - - - - 1.000 - -
90. bckdhb ENSDARG00000014676 17 1 - - - - - - 1.000 - - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030124-2]
91. cfhl5 ENSDARG00000105052 25 1 1.000 - - - - - - - - complement factor H like 5 [Source:ZFIN;Acc:ZDB-GENE-050208-782]
92. arl11l arl11l 31 1 1.000 - - - - - - - -
93. sync ENSDARG00000035944 8 1 - - - - - - 1.000 - - syncoilin, intermediate filament protein [Source:ZFIN;Acc:ZDB-GENE-060503-747]
94. tmprss13b ENSDARG00000077573 47 1 - - - - - - 1.000 - - transmembrane serine protease 13b [Source:ZFIN;Acc:ZDB-GENE-090309-2]
95. si:dkey-11o18.5 ENSDARG00000087633 3 1 - - - - - - 1.000 - - si:dkey-11o18.5 [Source:ZFIN;Acc:ZDB-GENE-091204-110]
96. RNF122 RNF122 29 1 - - - - - - 1.000 - -
97. fhl1a ENSDARG00000071498, ENSDARG00000115132 164 1 1.000 - - - - - - - - four and a half LIM domains 1a [Source:ZFIN;Acc:ZDB-GENE-040206-1]
98. zgc:172051 ENSDARG00000086569 12 1 1.000 - - - - - - - - zgc:172051 [Source:ZFIN;Acc:ZDB-GENE-080219-23]
99. CR753886.1 ENSDARG00000090548 22 1 - - - - - - 1.000 - - prolactin releasing hormone 2 [Source:NCBI gene;Acc:793765]
100. IQCG ENSDARG00000068678 77 1 - - - - - - 1.000 - - IQ motif containing G [Source:ZFIN;Acc:ZDB-GENE-050419-109]

There are 1328 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA