Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-193k19.1

Gene Name Gene ID Reads Annotation
si:ch211-193k19.1 ENSDARG00000035660 636 si:ch211-193k19.1 [Source:ZFIN;Acc:ZDB-GENE-060503-110]










Genes with expression patterns similar to si:ch211-193k19.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-193k19.1 ENSDARG00000035660 636 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-193k19.1 [Source:ZFIN;Acc:ZDB-GENE-060503-110]
2. tefb ENSDARG00000098103 370 2.69 - 0.836 - - - 0.939 0.915 - - thyrotrophic embryonic factor b [Source:ZFIN;Acc:ZDB-GENE-050522-224]
3. dennd1b ENSDARG00000101868 328 2.398 - 0.756 - - - 0.919 0.723 - - DENN/MADD domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-060503-16]
4. si:ch211-191j22.3 ENSDARG00000095459 959 2.287 0.708 - - - - 0.875 0.704 - - si:ch211-191j22.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4242]
5. guk1a ENSDARG00000030340 517 1.777 - - - - - 0.854 0.923 - - guanylate kinase 1a [Source:ZFIN;Acc:ZDB-GENE-040625-130]
6. cdc20 ENSDARG00000100741 3264 1.764 - - - - - 0.941 0.823 - - cell division cycle 20 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2044]
7. tmem192 ENSDARG00000037484, ENSDARG00000116740 269 1.757 - - - - - 0.946 0.811 - - transmembrane protein 192 [Source:ZFIN;Acc:ZDB-GENE-040426-2254]
8. afap1 ENSDARG00000055284 730 1.748 - - - - - 0.892 0.856 - - actin filament associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-100316-6]
9. tmem101 ENSDARG00000114508 494 1.738 - 0.792 - - - 0.946 - - - transmembrane protein 101 [Source:ZFIN;Acc:ZDB-GENE-121214-289]
10. THEM6_1 ENSDARG00000103914 469 1.735 - - - - - 0.953 0.782 - - thioesterase superfamily member 6 [Source:HGNC Symbol;Acc:HGNC:29656]
11. rab9a ENSDARG00000045027 201 1.718 - - - - - 0.951 0.767 - - RAB9A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-060825-293]
12. tmem53 ENSDARG00000038789 411 1.717 - - - - - 0.957 0.760 - - transmembrane protein 53 [Source:ZFIN;Acc:ZDB-GENE-040718-384]
13. si:ch211-233a24.2 ENSDARG00000062330, ENSDARG00000110766, ENSDARG00000116929 622 1.698 - - - - - 0.756 0.942 - - si:ch211-233a24.2 [Source:ZFIN;Acc:ZDB-GENE-090313-98]
14. FP017169.3 FP017169.3 216 1.698 - - - - 0.726 0.972 - - -
15. coa5 ENSDARG00000094833 1988 1.687 - - - - - 0.866 0.821 - - cytochrome C oxidase assembly factor 5 [Source:ZFIN;Acc:ZDB-GENE-060825-53]
16. CABZ01049802.1 CABZ01049802.1 195 1.682 - - - - - 0.911 0.771 - -
17. uspl1 ENSDARG00000034825, ENSDARG00000109866 457 1.681 - - - - - 0.904 0.777 - - ubiquitin specific peptidase like 1 [Source:ZFIN;Acc:ZDB-GENE-040930-7]
18. dscc1 ENSDARG00000019907 720 1.68 - 0.725 - - - 0.955 - - - DNA replication and sister chromatid cohesion 1 [Source:ZFIN;Acc:ZDB-GENE-040912-35]
19. CCNYL1 ENSDARG00000099692 1330 1.677 - 0.802 - - - 0.875 - - - cyclin Y-like 1 [Source:ZFIN;Acc:ZDB-GENE-060929-732]
20. tmem170a ENSDARG00000056628, ENSDARG00000111549 737 1.667 - - - - - 0.947 0.720 - - transmembrane protein 170A [Source:ZFIN;Acc:ZDB-GENE-040426-1622]
21. nsfb ENSDARG00000038991, ENSDARG00000109915 1443 1.663 - - - - - 0.808 0.855 - - N-ethylmaleimide-sensitive factor b [Source:ZFIN;Acc:ZDB-GENE-050808-1]
22. lamtor5 ENSDARG00000090194, ENSDARG00000115255 2539 1.651 - - - - - 0.909 0.742 - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 [Source:ZFIN;Acc:ZDB-GENE-110411-193]
23. ptpn23a ENSDARG00000070124 1206 1.648 - - - - - 0.812 0.836 - - protein tyrosine phosphatase, non-receptor type 23, a [Source:ZFIN;Acc:ZDB-GENE-100921-24]
24. CU929119.2 CU929119.2 859 1.638 - - - 0.712 - - 0.926 - -
25. zgc:175214 ENSDARG00000022891 1013 1.625 - - - - - 0.917 0.708 - - zgc:175214 [Source:ZFIN;Acc:ZDB-GENE-080303-32]
26. smg7 ENSDARG00000060767 2759 1.606 - - - - - 0.876 0.730 - - SMG7 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-030131-9122]
27. FUZ ENSDARG00000079730 821 1.593 - - - - - 0.827 0.766 - - fuzzy planar cell polarity protein [Source:ZFIN;Acc:ZDB-GENE-090609-2]
28. cicb ENSDARG00000055502 1356 1.587 - 0.801 - - - 0.786 - - - capicua transcriptional repressor b [Source:ZFIN;Acc:ZDB-GENE-030131-1966]
29. tmem18 ENSDARG00000036704 1784 1.586 - - - - - 0.825 0.761 - - transmembrane protein 18 [Source:ZFIN;Acc:ZDB-GENE-040927-26]
30. cx30.3 ENSDARG00000042707, ENSDARG00000116331 2399 1.585 - - - - - 0.797 0.788 - - connexin 30.3 [Source:ZFIN;Acc:ZDB-GENE-040406-1]
31. tmem238 tmem238 1403 1.582 - - - - - 0.842 0.740 - -
32. nos2b ENSDARG00000031976 935 1.58 - - - - - 0.789 0.791 - - nitric oxide synthase 2b, inducible [Source:ZFIN;Acc:ZDB-GENE-080916-1]
33. elp5 ENSDARG00000067918 541 1.579 - - - - - 0.874 0.705 - - elongator acetyltransferase complex subunit 5 [Source:ZFIN;Acc:ZDB-GENE-061215-33]
34. CABZ01054962.1 CABZ01054962.1 91 1.578 - - - - 0.716 - 0.862 - -
35. pdcd10a ENSDARG00000035054, ENSDARG00000109378 2227 1.578 - - - - - 0.753 0.825 - - programmed cell death 10a [Source:ZFIN;Acc:ZDB-GENE-040426-1432]
36. tom1 ENSDARG00000104581 1457 1.574 - - - - - 0.849 0.725 - - target of myb1 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060721-1]
37. tmem50a ENSDARG00000015757 3244 1.565 - - - - - 0.824 0.741 - - transmembrane protein 50A [Source:ZFIN;Acc:ZDB-GENE-040426-2937]
38. ccnd2b ENSDARG00000070408 411 1.553 - - - - - 0.848 0.705 - - cyclin D2, b [Source:ZFIN;Acc:ZDB-GENE-050420-354]
39. atad5a ENSDARG00000070568 1840 1.548 - 0.772 - - - - 0.776 - - ATPase family, AAA domain containing 5a [Source:ZFIN;Acc:ZDB-GENE-070912-20]
40. ptgs2b ENSDARG00000010276 692 1.545 - - - - - 0.830 0.715 - - prostaglandin-endoperoxide synthase 2b [Source:ZFIN;Acc:ZDB-GENE-041014-323]
41. CU681846.1 CU681846.1 86 1.544 - - - - 0.742 - 0.802 - -
42. TRIP10 TRIP10 1079 1.539 0.700 - - - - 0.839 - - -
43. fntb ENSDARG00000027916 736 1.532 - 0.729 - - - - 0.803 - - farnesyltransferase, CAAX box, beta [Source:ZFIN;Acc:ZDB-GENE-030131-2220]
44. ptrhd1 ENSDARG00000016122 2705 1.52 - 0.703 - - - 0.817 - - - peptidyl-tRNA hydrolase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081110-2]
45. chmp5b ENSDARG00000103718 1608 1.519 - - - - - 0.811 0.708 - - charged multivesicular body protein 5b [Source:ZFIN;Acc:ZDB-GENE-040426-1374]
46. nfkbiaa ENSDARG00000005481 948 1.515 - - - - - 0.815 0.700 - - nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a [Source:ZFIN;Acc:ZDB-GENE-040426-2227]
47. BX088711.1 BX088711.1 125 1.501 0.712 - - - - - 0.789 - -
48. rac2 ENSDARG00000038010 5837 1.477 - - - - - 0.755 0.722 - - Rac family small GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-040625-27]
49. si:dkeyp-53d3.5 ENSDARG00000101542 171 1.472 0.742 - - - - - 0.730 - - si:dkeyp-53d3.5 [Source:ZFIN;Acc:ZDB-GENE-050208-485]
50. zgc:112083 ENSDARG00000037405 306 1.459 - 0.725 - - - - 0.734 - - zgc:112083 [Source:ZFIN;Acc:ZDB-GENE-050417-284]
51. slc22a7a ENSDARG00000056028 2426 1.447 - - - - 0.730 0.717 - - - solute carrier family 22 (organic anion transporter), member 7a [Source:ZFIN;Acc:ZDB-GENE-050506-52]
52. ppig ENSDARG00000044431 3427 1.446 - - - - - 0.730 0.716 - - peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
53. nus1 ENSDARG00000027813 1417 0.979 - - - - - 0.979 - - - NUS1, dehydrodolichyl diphosphate synthase subunit [Source:ZFIN;Acc:ZDB-GENE-040718-48]
54. dnajb9a ENSDARG00000052072 578 0.974 - - - - - 0.974 - - - DnaJ (Hsp40) homolog, subfamily B, member 9a [Source:ZFIN;Acc:ZDB-GENE-050626-115]
55. psmb6 ENSDARG00000002240 8015 0.973 - - - - - 0.973 - - - proteasome subunit beta 6 [Source:ZFIN;Acc:ZDB-GENE-990415-216]
56. samd11 ENSDARG00000077852 631 0.97 - - - - - 0.970 - - - sterile alpha motif domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-060428-2]
57. cnot8 ENSDARG00000020043 866 0.967 - - - - - 0.967 - - - CCR4-NOT transcription complex, subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2845]
58. rngtt ENSDARG00000032261 833 0.967 - - - - - 0.967 - - - RNA guanylyltransferase and 5'-phosphatase [Source:ZFIN;Acc:ZDB-GENE-040426-2087]
59. gdap1l1 ENSDARG00000028628 233 0.965 - - - - - 0.965 - - - ganglioside induced differentiation associated protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-080812-2]
60. rprd2a ENSDARG00000058089 743 0.965 - - - - - 0.965 - - - regulation of nuclear pre-mRNA domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6641]
61. tgm5l ENSDARG00000098837 174 0.965 - - - - - - 0.965 - - transglutaminase 5, like [Source:ZFIN;Acc:ZDB-GENE-110411-176]
62. pip5k1aa ENSDARG00000100396 1644 0.964 - - - - - 0.964 - - - phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, a [Source:ZFIN;Acc:ZDB-GENE-050522-517]
63. samd13 ENSDARG00000062977 331 0.964 - - - - - - 0.964 - - sterile alpha motif domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-060929-676]
64. actr8 ENSDARG00000103610 367 0.961 - - - - - 0.961 - - - ARP8 actin related protein 8 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-5065]
65. ube2j1 ENSDARG00000033489 497 0.961 - - - - - 0.961 - - - ubiquitin-conjugating enzyme E2, J1 [Source:ZFIN;Acc:ZDB-GENE-040426-2853]
66. MYOF ENSDARG00000006112 436 0.96 - - - - - 0.960 - - - myoferlin [Source:ZFIN;Acc:ZDB-GENE-040426-1138]
67. FAM171A2 FAM171A2 707 0.96 - - - - - 0.960 - - -
68. mrpl24 ENSDARG00000019222 798 0.959 - - - - - 0.959 - - - mitochondrial ribosomal protein L24 [Source:ZFIN;Acc:ZDB-GENE-040718-98]
69. si:ch211-86h15.1 ENSDARG00000074098 354 0.958 - - - - - 0.958 - - - si:ch211-86h15.1 [Source:ZFIN;Acc:ZDB-GENE-081107-38]
70. cln6a ENSDARG00000077584 1090 0.958 - - - - - 0.958 - - - CLN6, transmembrane ER protein a [Source:ZFIN;Acc:ZDB-GENE-041010-57]
71. btbd9 ENSDARG00000068983 356 0.958 - - - - - 0.958 - - - BTB (POZ) domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-040704-39]
72. gnl3l ENSDARG00000020595, ENSDARG00000109309 3582 0.958 - - - - - 0.958 - - - guanine nucleotide binding protein-like 3 (nucleolar)-like [Source:ZFIN;Acc:ZDB-GENE-040723-1]
73. slc12a9 ENSDARG00000060366 293 0.957 - - - - - 0.957 - - - solute carrier family 12, member 9 [Source:ZFIN;Acc:ZDB-GENE-050208-222]
74. col17a1b ENSDARG00000079011 143 0.957 - - - - - 0.957 - - - collagen, type XVII, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-7145]
75. stra13 598 0.957 - - - - - 0.957 - - - stimulated by retinoic acid 13 homolog (mouse)
76. ccdc25 ENSDARG00000021753 3837 0.957 - - - - - 0.957 - - - coiled-coil domain containing 25 [Source:ZFIN;Acc:ZDB-GENE-040426-1389]
77. slc9a6a ENSDARG00000009209, ENSDARG00000111329 184 0.957 - - - - - 0.957 - - - solute carrier family 9, subfamily A (NHE6, cation proton antiporter 6), member 6a [Source:ZFIN;Acc:ZDB-GENE-070424-104]
78. CLCC1 155 0.956 - - - - - - 0.956 - - chloride channel CLIC-like 1, transcript variant X2
79. ngly1 ENSDARG00000003205 733 0.956 - - - - - 0.956 - - - N-glycanase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-535]
80. C13H4orf32 C13H4orf32 174 0.955 - - - - - 0.955 - - -
81. gnb1a ENSDARG00000090454 481 0.955 - - - - - - 0.955 - - guanine nucleotide binding protein (G protein), beta polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-030131-823]
82. ik ENSDARG00000004161 3132 0.955 - - - - - 0.955 - - - IK cytokine [Source:ZFIN;Acc:ZDB-GENE-030131-960]
83. tmem205 ENSDARG00000100677 101 0.954 - - - - - - 0.954 - - transmembrane protein 205 [Source:ZFIN;Acc:ZDB-GENE-070112-1692]
84. dhrs13a.2 ENSDARG00000111240 491 0.953 - - - - - 0.953 - - - dehydrogenase/reductase (SDR family) member 13a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040912-69]
85. pip5k1ab ENSDARG00000024642 1988 0.953 - - - - - 0.953 - - - phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, b [Source:ZFIN;Acc:ZDB-GENE-041111-123]
86. RECQL4 ENSDARG00000077516 462 0.953 - - - - - 0.953 - - - RecQ helicase-like 4 [Source:ZFIN;Acc:ZDB-GENE-091112-2]
87. kmt2e ENSDARG00000007523 1851 0.952 - - - - - 0.952 - - - lysine (K)-specific methyltransferase 2E [Source:ZFIN;Acc:ZDB-GENE-030131-4120]
88. tprg1 ENSDARG00000056026, ENSDARG00000115269 382 0.952 - - - - - 0.952 - - - tumor protein p63 regulated 1 [Source:ZFIN;Acc:ZDB-GENE-070410-113]
89. si:dkeyp-110g5.4 ENSDARG00000092482 249 0.952 - - - - - 0.952 - - - si:dkeyp-110g5.4 [Source:ZFIN;Acc:ZDB-GENE-081104-452]
90. PCSK6 ENSDARG00000104574 710 0.952 - - - - - 0.952 - - - proprotein convertase subtilisin/kexin type 6 [Source:ZFIN;Acc:ZDB-GENE-100908-1]
91. ccdc173 ENSDARG00000077928 260 0.951 - - - - - 0.951 - - - coiled-coil domain containing 173 [Source:ZFIN;Acc:ZDB-GENE-081104-457]
92. fosb ENSDARG00000055751 170 0.951 - - - - - 0.951 - - - FBJ murine osteosarcoma viral oncogene homolog B [Source:ZFIN;Acc:ZDB-GENE-041114-181]
93. nr1d2b ENSDARG00000009594 1144 0.95 - - - - - 0.950 - - - nuclear receptor subfamily 1, group D, member 2b [Source:ZFIN;Acc:ZDB-GENE-990415-244]
94. sc:d0139 sc:d0139 233 0.95 - - - - - 0.950 - - -
95. FP236334.1 FP236334.1 345 0.95 - - - - - 0.950 - - -
96. CABZ01072083.1 CABZ01072083.1 56 0.95 - - - - - 0.950 - - -
97. CR759791.3 CR759791.3 134 0.95 - - - - - 0.950 - - -
98. ADAMTSL4 ENSDARG00000063407 1045 0.95 - - - - - 0.950 - - - ADAMTS like 4 [Source:HGNC Symbol;Acc:HGNC:19706]
99. adamts1 ENSDARG00000103519 539 0.95 - - - - - 0.950 - - - ADAM metallopeptidase with thrombospondin type 1 motif, 1 [Source:ZFIN;Acc:ZDB-GENE-070814-1]
100. znf750 ENSDARG00000102267 327 0.95 - - - - - 0.950 - - - zinc finger protein 750 [Source:ZFIN;Acc:ZDB-GENE-050417-313]

There are 1260 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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