Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-191i18.2

Gene Name Gene ID Reads Annotation
si:ch211-191i18.2 ENSDARG00000070141 1164 si:ch211-191i18.2 [Source:ZFIN;Acc:ZDB-GENE-060503-769]










Genes with expression patterns similar to si:ch211-191i18.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-191i18.2 ENSDARG00000070141 1164 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-191i18.2 [Source:ZFIN;Acc:ZDB-GENE-060503-769]
2. si:ch211-120j21.1 si:ch211-120j21.1 638 1.624 - - - - - 0.870 0.754 - -
3. si:dkey-204f11.64 ENSDARG00000094695 586 1.597 0.730 0.867 - - - - - - - si:dkey-204f11.64 [Source:ZFIN;Acc:ZDB-GENE-030131-8332]
4. sema3d ENSDARG00000017369 212 1.566 - 0.791 - - - - 0.775 - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D [Source:ZFIN;Acc:ZDB-GENE-990715-2]
5. ercc6 ENSDARG00000075612 1175 1.538 - 0.786 - 0.752 - - - - - excision repair cross-complementation group 6 [Source:ZFIN;Acc:ZDB-GENE-070228-1]
6. PTGIR ENSDARG00000038278 254 1.525 - 0.795 - - - - - 0.730 - prostaglandin I2 receptor [Source:ZFIN;Acc:ZDB-GENE-120511-1]
7. zgc:56585 ENSDARG00000026236 704 1.519 - - - 0.718 - - - 0.801 - zgc:56585 [Source:ZFIN;Acc:ZDB-GENE-040426-1084]
8. CT573468.1 CT573468.1 283 1.517 - - - 0.715 - - - 0.802 -
9. zgc:65997 ENSDARG00000043562, ENSDARG00000114791, ENSDARG00000115351 606 1.504 - - - - - 0.700 - 0.804 - zgc:65997 [Source:ZFIN;Acc:ZDB-GENE-040426-1502]
10. mob3c ENSDARG00000043705 306 1.5 - - - 0.703 - - - 0.797 - MOB kinase activator 3C [Source:ZFIN;Acc:ZDB-GENE-040704-32]
11. ltbp3 325 1.498 - - - - - - 0.716 0.782 - latent transforming growth factor beta binding protein 3, transcript variant X3
12. ehmt1b ENSDARG00000026634, ENSDARG00000116921 1261 1.494 - - - - - 0.736 0.758 - - euchromatic histone-lysine N-methyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-080515-3]
13. polr2j ENSDARG00000035146 1493 1.493 - - - - - 0.713 - 0.780 - polymerase (RNA) II (DNA directed) polypeptide J [Source:ZFIN;Acc:ZDB-GENE-050522-120]
14. mccc1 ENSDARG00000102538, ENSDARG00000115996 2069 1.481 - - - - - 0.705 0.776 - - methylcrotonoyl-CoA carboxylase 1 (alpha) [Source:ZFIN;Acc:ZDB-GENE-050208-450]
15. atp11a ENSDARG00000008413 742 1.471 - 0.726 - - - - - 0.745 - ATPase phospholipid transporting 11A [Source:ZFIN;Acc:ZDB-GENE-090311-52]
16. nelfb ENSDARG00000035505 1337 1.462 - 0.725 - - - - - 0.737 - negative elongation factor complex member B [Source:ZFIN;Acc:ZDB-GENE-040426-765]
17. gbp ENSDARG00000040059 1939 1.462 - 0.739 - - - - 0.723 - - glycogen synthase kinase binding protein [Source:ZFIN;Acc:ZDB-GENE-990714-7]
18. ensaa ENSDARG00000036944 685 1.441 0.727 - - 0.714 - - - - - endosulfine alpha a [Source:ZFIN;Acc:ZDB-GENE-060503-181]
19. zbtb8os ENSDARG00000016368 284 1.436 - - - 0.700 - - - 0.736 - zinc finger and BTB domain containing 8 opposite strand [Source:ZFIN;Acc:ZDB-GENE-050417-176]
20. C13H10orf71 3489 1.436 - - - - - 0.722 0.714 - - chromosome 13 C10orf71 homolog
21. trappc2 ENSDARG00000097660 760 1.423 - 0.722 - - - - - 0.701 - trafficking protein particle complex 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1266]
22. ephx1 ENSDARG00000042854 161 0.884 - 0.884 - - - - - - - epoxide hydrolase 1, microsomal (xenobiotic) [Source:ZFIN;Acc:ZDB-GENE-040426-913]
23. tspan7b ENSDARG00000008407 5740 0.882 - - - - - - 0.882 - - tetraspanin 7b [Source:ZFIN;Acc:ZDB-GENE-040927-5]
24. clgn ENSDARG00000009315 993 0.865 - - - - - 0.865 - - - calmegin [Source:ZFIN;Acc:ZDB-GENE-060929-708]
25. FTL FTL 53 0.864 - - - - - - 0.864 - -
26. Mar-05 Mar-05 2391 0.864 - - - - - - 0.864 - -
27. cth ENSDARG00000074301 3860 0.861 - - - - - 0.861 - - - cystathionase (cystathionine gamma-lyase) [Source:ZFIN;Acc:ZDB-GENE-030131-774]
28. si:dkey-260c8.4 si:dkey-260c8.4 106 0.856 - 0.856 - - - - - - -
29. tmem201 ENSDARG00000077307 453 0.855 - - - - - - - 0.855 - transmembrane protein 201 [Source:ZFIN;Acc:ZDB-GENE-070410-61]
30. rnaset2 ENSDARG00000036282 2226 0.853 0.853 - - - - - - - - ribonuclease T2 [Source:ZFIN;Acc:ZDB-GENE-030131-2513]
31. CR848032.1 ENSDARG00000102710 338 0.851 - - - - - 0.851 - - -
32. sh3bp5la ENSDARG00000019160 441 0.85 - 0.850 - - - - - - - SH3-binding domain protein 5-like, a [Source:ZFIN;Acc:ZDB-GENE-040426-2187]
33. cbx1b ENSDARG00000054442 1206 0.85 - 0.850 - - - - - - - chromobox homolog 1b (HP1 beta homolog Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040625-68]
34. rad21a ENSDARG00000006092 393 0.849 - 0.849 - - - - - - - RAD21 cohesin complex component a [Source:ZFIN;Acc:ZDB-GENE-030131-994]
35. ppt2 ENSDARG00000104542 888 0.849 - - - - - 0.849 - - - palmitoyl-protein thioesterase 2 [Source:ZFIN;Acc:ZDB-GENE-010430-4]
36. trappc3 ENSDARG00000045364 1021 0.848 - - - - - 0.848 - - - trafficking protein particle complex 3 [Source:ZFIN;Acc:ZDB-GENE-040801-120]
37. sf3b2 ENSDARG00000018049 4675 0.845 - - - - - 0.845 - - - splicing factor 3b, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-070928-1]
38. tmem129 ENSDARG00000075346 109 0.845 - 0.845 - - - - - - - transmembrane protein 129, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-2796]
39. srsf5b ENSDARG00000027734 6996 0.844 - - - - - 0.844 - - - serine/arginine-rich splicing factor 5b [Source:ZFIN;Acc:ZDB-GENE-040718-354]
40. timeless ENSDARG00000078497 1114 0.842 - - - - - 0.842 - - - timeless circadian clock [Source:ZFIN;Acc:ZDB-GENE-030131-8978]
41. dnajb13 ENSDARG00000043157 50 0.842 - 0.842 - - - - - - - DnaJ (Hsp40) homolog, subfamily B, member 13 [Source:ZFIN;Acc:ZDB-GENE-040910-4]
42. hsbp1b ENSDARG00000041921 6170 0.842 - - - - - 0.842 - - - heat shock factor binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1721]
43. tagapa ENSDARG00000002353 20 0.841 - 0.841 - - - - - - - T cell activation RhoGTPase activating protein a [Source:ZFIN;Acc:ZDB-GENE-040426-1877]
44. fam105ba_1 fam105ba_1 484 0.84 - - - 0.840 - - - - -
45. spon2a ENSDARG00000025465, ENSDARG00000115300 294 0.84 - - - - - - - 0.840 - spondin 2a, extracellular matrix protein [Source:ZFIN;Acc:ZDB-GENE-990415-160]
46. gclm ENSDARG00000018953 1712 0.839 - 0.839 - - - - - - - glutamate-cysteine ligase, modifier subunit [Source:ZFIN;Acc:ZDB-GENE-030131-5906]
47. BX649494.1 BX649494.1 195 0.839 - - - - - - 0.839 - -
48. ppm1ab ENSDARG00000043250 772 0.839 - - - 0.839 - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1Ab [Source:ZFIN;Acc:ZDB-GENE-991102-14]
49. ctgfa ENSDARG00000042934, ENSDARG00000112741 2123 0.839 - - - - - - 0.839 - - connective tissue growth factor a [Source:ZFIN;Acc:ZDB-GENE-030131-102]
50. mul1a ENSDARG00000021398 438 0.838 - - - - - 0.838 - - - mitochondrial E3 ubiquitin protein ligase 1a [Source:ZFIN;Acc:ZDB-GENE-050102-5]
51. cyb5d2 ENSDARG00000061006, ENSDARG00000109422 75 0.838 - 0.838 - - - - - - - cytochrome b5 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050506-83]
52. usp16 ENSDARG00000060633 684 0.837 - 0.837 - - - - - - - ubiquitin specific peptidase 16 [Source:ZFIN;Acc:ZDB-GENE-030131-4153]
53. shha ENSDARG00000068567, ENSDARG00000111447 1497 0.837 - - - - - - 0.837 - - sonic hedgehog a [Source:ZFIN;Acc:ZDB-GENE-980526-166]
54. AL954146.1 ENSDARG00000038891 114 0.837 - 0.837 - - - - - - - trypsin I-P1-like [Source:NCBI gene;Acc:560023]
55. acer1 ENSDARG00000010347 101 0.837 - 0.837 - - - - - - - alkaline ceramidase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-70]
56. KCNJ15 ENSDARG00000058988 18 0.835 - 0.835 - - - - - - - potassium voltage-gated channel subfamily J member 15 [Source:HGNC Symbol;Acc:HGNC:6261]
57. C9HXorf36 C9HXorf36 44 0.835 - 0.835 - - - - - - -
58. ftr78 ftr78 273 0.834 - 0.834 - - - - - - -
59. slc9a6a ENSDARG00000009209, ENSDARG00000111329 184 0.833 - 0.833 - - - - - - - solute carrier family 9, subfamily A (NHE6, cation proton antiporter 6), member 6a [Source:ZFIN;Acc:ZDB-GENE-070424-104]
60. si:ch73-127m5.1 ENSDARG00000060680 253 0.832 - - - - - - 0.832 - - si:ch73-127m5.1 [Source:ZFIN;Acc:ZDB-GENE-130531-25]
61. marveld2b ENSDARG00000061651 459 0.832 - 0.832 - - - - - - - MARVEL domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-050208-54]
62. mnx1 ENSDARG00000035984, ENSDARG00000109419 1014 0.832 - - - - - - 0.832 - - motor neuron and pancreas homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040409-1]
63. e2f8 ENSDARG00000057323 1432 0.831 - - - - - 0.831 - - - E2F transcription factor 8 [Source:ZFIN;Acc:ZDB-GENE-041111-260]
64. tbc1d19 ENSDARG00000013842 253 0.829 - 0.829 - - - - - - - TBC1 domain family, member 19 [Source:ZFIN;Acc:ZDB-GENE-040426-1265]
65. nudt2 ENSDARG00000058728 371 0.829 - - - 0.829 - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 2 [Source:ZFIN;Acc:ZDB-GENE-040718-7]
66. cthrc1a ENSDARG00000087198 1001 0.829 - - - - - - 0.829 - - collagen triple helix repeat containing 1a [Source:ZFIN;Acc:ZDB-GENE-040808-22]
67. cep170a cep170a 652 0.827 - - - - - - 0.827 - -
68. zgc:110434_1 30 0.827 - 0.827 - - - - - - - zgc:110434
69. cacng2a ENSDARG00000032565 99 0.827 - - - - - - - 0.827 - calcium channel, voltage-dependent, gamma subunit 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1401]
70. prmt10 prmt10 312 0.824 - - - 0.824 - - - - -
71. CU570681.1 CU570681.1 512 0.823 - - - - - 0.823 - - -
72. sox9a ENSDARG00000003293 812 0.823 - - - - - - 0.823 - - SRY (sex determining region Y)-box 9a [Source:ZFIN;Acc:ZDB-GENE-001103-1]
73. si:dkey-152b24.6 ENSDARG00000105043 39 0.823 - - - - - - - 0.823 - si:dkey-152b24.6 [Source:ZFIN;Acc:ZDB-GENE-100922-31]
74. clstn2 ENSDARG00000060637 548 0.823 - - - - - - 0.823 - - calsyntenin 2 [Source:ZFIN;Acc:ZDB-GENE-070911-2]
75. slc2a15b ENSDARG00000053269 899 0.822 - - - - - - - 0.822 - solute carrier family 2 (facilitated glucose transporter), member 15b [Source:ZFIN;Acc:ZDB-GENE-050508-1]
76. zgc:165653 ENSDARG00000104713 1603 0.821 - 0.821 - - - - - - - zgc:165653 [Source:ZFIN;Acc:ZDB-GENE-070620-24]
77. eng1b eng1b 2544 0.821 - - - - - - 0.821 - -
78. slc30a1b ENSDARG00000053896 293 0.82 0.820 - - - - - - - - solute carrier family 30 (zinc transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-070424-43]
79. usp19 ENSDARG00000004132 811 0.82 - - - 0.820 - - - - - ubiquitin specific peptidase 19 [Source:ZFIN;Acc:ZDB-GENE-030131-3055]
80. mir34 176 0.82 - 0.820 - - - - - - - microRNA 34
81. ttc26 ENSDARG00000012039 505 0.819 - - - 0.819 - - - - - tetratricopeptide repeat domain 26 [Source:ZFIN;Acc:ZDB-GENE-041212-41]
82. fam98a ENSDARG00000078391, ENSDARG00000109752, ENSDARG00000110498 997 0.819 - - - - - - 0.819 - - family with sequence similarity 98, member A [Source:ZFIN;Acc:ZDB-GENE-091202-6]
83. eps15l1a ENSDARG00000042670 1565 0.819 - - - - - 0.819 - - - epidermal growth factor receptor pathway substrate 15-like 1a [Source:ZFIN;Acc:ZDB-GENE-060503-274]
84. emc4_1 ENSDARG00000039268 443 0.819 - - - - - 0.819 - - - ER membrane protein complex subunit 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1891]
85. DUSP8 DUSP8 442 0.818 - - - - - - 0.818 - -
86. echdc2 ENSDARG00000016607 719 0.818 - - - - - - - 0.818 - enoyl CoA hydratase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030219-147]
87. CCDC134_1 CCDC134_1 200 0.818 - - - - - - - 0.818 -
88. ctssb.2 ctssb.2 122 0.818 - 0.818 - - - - - - -
89. rp9 ENSDARG00000098942 3172 0.817 - - - - - - - 0.817 - RP9, pre-mRNA splicing factor [Source:ZFIN;Acc:ZDB-GENE-041114-42]
90. marveld1 ENSDARG00000011724 1025 0.817 - - - - - 0.817 - - - MARVEL domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050208-33]
91. tgfb3 ENSDARG00000019367 2327 0.816 - - - - - - 0.816 - - transforming growth factor, beta 3 [Source:ZFIN;Acc:ZDB-GENE-030723-4]
92. TNFRSF14 TNFRSF14 330 0.816 - - - - - 0.816 - - -
93. casp2 ENSDARG00000062052 559 0.816 - - - 0.816 - - - - - caspase 2, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-3]
94. srd5a1 ENSDARG00000020509 242 0.814 - - - 0.814 - - - - - steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1) [Source:ZFIN;Acc:ZDB-GENE-060929-938]
95. BX001033.2 BX001033.2 857 0.814 - - - - - - - 0.814 -
96. spop ENSDARG00000100519 177 0.814 - - - - - - - 0.814 - speckle-type POZ protein [Source:ZFIN;Acc:ZDB-GENE-040426-1378]
97. pdk1 ENSDARG00000013128 526 0.813 - - - - - - - 0.813 - pyruvate dehydrogenase kinase, isozyme 1 [Source:ZFIN;Acc:ZDB-GENE-091204-402]
98. si:ch211-198n5.11 ENSDARG00000054400, ENSDARG00000112640 97 0.812 - - - - - - - 0.812 - si:ch211-198n5.11 [Source:ZFIN;Acc:ZDB-GENE-050411-52]
99. CU469544.1 CU469544.1 219 0.812 - - - - - - - 0.812 -
100. si:zfos-364h11.1 99 0.811 - - - - - - - 0.811 - si:zfos-364h11.1, transcript variant X4

There are 865 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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