Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-191a6.3

Gene Name Gene ID Reads Annotation
si:ch211-191a6.3 si:ch211-191a6.3 6










Genes with expression patterns similar to si:ch211-191a6.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-191a6.3 si:ch211-191a6.3 6 4 1.000 1.000 - - 1.000 - - 1.000 -
2. cldn19 ENSDARG00000044569 281 2.639 0.857 0.953 - - - - - 0.829 - claudin 19 [Source:ZFIN;Acc:ZDB-GENE-050417-242]
3. CABZ01044346.1 CABZ01044346.1 12 2 1.000 - - - - - - 1.000 -
4. CABZ01063077.1 CABZ01063077.1 22 1.952 0.952 1.000 - - - - - - -
5. CABZ01068153.1 CABZ01068153.1 211 1.902 0.945 0.957 - - - - - - -
6. setmar ENSDARG00000074836 29 1.84 1.000 - - - - - - 0.840 - SET domain and mariner transposase fusion gene [Source:ZFIN;Acc:ZDB-GENE-080204-61]
7. CABZ01073032.1 CABZ01073032.1 125 1.82 0.952 0.868 - - - - - - -
8. pak1_1 ENSDARG00000103959 28 1.788 1.000 0.788 - - - - - - - p21 protein (Cdc42/Rac)-activated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030826-29]
9. crygn2 ENSDARG00000030411 2551 1.752 0.913 - - - 0.839 - - - - crystallin, gamma N2 [Source:ZFIN;Acc:ZDB-GENE-040801-16]
10. trpm1a ENSDARG00000011259, ENSDARG00000111200, ENSDARG00000112747 48 1.736 1.000 - - - 0.736 - - - - transient receptor potential cation channel, subfamily M, member 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1372]
11. POLR2M ENSDARG00000074968, ENSDARG00000113507 137 1.718 0.905 0.813 - - - - - - - RNA polymerase II subunit M [Source:ZFIN;Acc:ZDB-GENE-160728-95]
12. MPPED1 ENSDARG00000088181 117 1.703 1.000 - - - 0.703 - - - - metallophosphoesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-111104-1]
13. MASP1 ENSDARG00000068726 34 1.673 0.723 0.950 - - - - - - - mannan-binding lectin serine peptidase 1 [Source:ZFIN;Acc:ZDB-GENE-110421-4]
14. abcg1 ENSDARG00000063475 97 1.598 - 0.760 - - 0.838 - - - - ATP-binding cassette, sub-family G (WHITE), member 1 [Source:ZFIN;Acc:ZDB-GENE-070424-84]
15. rab32a ENSDARG00000029036 2157 1.566 0.843 0.723 - - - - - - - RAB32a, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-031006-10]
16. si:dkeyp-33e11.2 si:dkeyp-33e11.2 232 1.543 0.726 0.817 - - - - - - -
17. FP085391.2 FP085391.2 85 1 1.000 - - - - - - - -
18. grtp1b ENSDARG00000030269 24 1 - 1.000 - - - - - - - growth hormone regulated TBC protein 1b [Source:ZFIN;Acc:ZDB-GENE-050417-346]
19. si:dkey-46g23.3 si:dkey-46g23.3 16 1 - 1.000 - - - - - - -
20. si:ch73-155e10.1 si:ch73-155e10.1 13 1 1.000 - - - - - - - -
21. FGFBP3 FGFBP3 993 1 1.000 - - - - - - - -
22. ralgapa1 ENSDARG00000076889 36 1 1.000 - - - - - - - - Ral GTPase activating protein, alpha subunit 1 (catalytic) [Source:ZFIN;Acc:ZDB-GENE-080806-1]
23. BX119910.3 BX119910.3 7 1 1.000 - - - - - - - -
24. map3k8 ENSDARG00000061710 76 1 1.000 - - - - - - - - mitogen-activated protein kinase kinase kinase 8 [Source:ZFIN;Acc:ZDB-GENE-100316-8]
25. znf106b ENSDARG00000091947 108 1 1.000 - - - - - - - - zinc finger protein 106b [Source:ZFIN;Acc:ZDB-GENE-091118-24]
26. CR318593.1_1 CR318593.1_1 8 1 1.000 - - - - - - - -
27. zgc:110789 ENSDARG00000052497, ENSDARG00000111073 171 1 1.000 - - - - - - - - zgc:110789 [Source:ZFIN;Acc:ZDB-GENE-050306-38]
28. cyp2aa2 ENSDARG00000104811 77 1 1.000 - - - - - - - - y cytochrome P450, family 2, subfamily AA, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061027-232]
29. scd ENSDARG00000033662 146 1 1.000 - - - - - - - - stearoyl-CoA desaturase (delta-9-desaturase) [Source:ZFIN;Acc:ZDB-GENE-031106-3]
30. si:ch211-173m16.2 ENSDARG00000093284 186 1 - - - - - - - 1.000 - si:ch211-173m16.2 [Source:ZFIN;Acc:ZDB-GENE-070912-155]
31. C18H15orf61 C18H15orf61 104 1 1.000 - - - - - - - -
32. slc12a8 ENSDARG00000074384 12 1 - 1.000 - - - - - - - solute carrier family 12, member 8 [Source:ZFIN;Acc:ZDB-GENE-030131-5654]
33. si:dkey-240n22.6 ENSDARG00000089296, ENSDARG00000106998 3 1 1.000 - - - - - - - - si:dkey-240n22.6 [Source:ZFIN;Acc:ZDB-GENE-070705-411]
34. si:dkey-148e22.3 si:dkey-148e22.3 4 1 1.000 - - - - - - - -
35. bcl11aa ENSDARG00000061352 61 1 1.000 - - - - - - - - B cell CLL/lymphoma 11Aa [Source:ZFIN;Acc:ZDB-GENE-060421-4643]
36. zdhhc23b ENSDARG00000003899, ENSDARG00000116894 31 1 1.000 - - - - - - - - zinc finger, DHHC-type containing 23b [Source:ZFIN;Acc:ZDB-GENE-040808-13]
37. trmt2b ENSDARG00000033967 127 1 1.000 - - - - - - - - tRNA methyltransferase 2 homolog B [Source:ZFIN;Acc:ZDB-GENE-050809-101]
38. rgs11 ENSDARG00000037646 24 1 1.000 - - - - - - - - regulator of G protein signaling 11 [Source:ZFIN;Acc:ZDB-GENE-080220-46]
39. ttc39a ENSDARG00000074126 7 1 - 1.000 - - - - - - - tetratricopeptide repeat domain 39A [Source:ZFIN;Acc:ZDB-GENE-091116-42]
40. FHDC1 ENSDARG00000074812 2 1 1.000 - - - - - - - - FH2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040826-4]
41. CR450785.2 ENSDARG00000111875 1 1 1.000 - - - - - - - -
42. stxbp5l ENSDARG00000006383, ENSDARG00000110740 3 1 - - - - - - - 1.000 - syntaxin binding protein 5-like [Source:ZFIN;Acc:ZDB-GENE-041210-220]
43. CR936540.2 CR936540.2 4 1 1.000 - - - - - - - -
44. si:dkeyp-87e3.3 si:dkeyp-87e3.3 68 1 1.000 - - - - - - - -
45. sult4a1 ENSDARG00000101967 205 1 1.000 - - - - - - - - sulfotransferase family 4A, member 1 [Source:ZFIN;Acc:ZDB-GENE-060421-2705]
46. si:ch211-224l10.4 ENSDARG00000088762 36 1 - 1.000 - - - - - - - si:ch211-224l10.4 [Source:ZFIN;Acc:ZDB-GENE-090312-125]
47. si:dkey-158e13.14 si:dkey-158e13.14 1 1 - - - - - - - 1.000 -
48. htra1b ENSDARG00000014907 146 1 1.000 - - - - - - - - HtrA serine peptidase 1b [Source:ZFIN;Acc:ZDB-GENE-080219-7]
49. antxr1a ENSDARG00000025672 32 1 - 1.000 - - - - - - - ANTXR cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-110411-15]
50. c6ast4 ENSDARG00000052578 6 1 1.000 - - - - - - - - six-cysteine containing astacin protease 4 [Source:ZFIN;Acc:ZDB-GENE-050626-100]
51. si:dkey-4m13.3 6 1 1.000 - - - - - - - - si:dkey-4m13.3
52. ugt5e1 ENSDARG00000058048 25 1 - - - - - - - 1.000 - UDP glucuronosyltransferase 5 family, polypeptide E1 [Source:ZFIN;Acc:ZDB-GENE-081105-106]
53. si:ch211-274p24.4 ENSDARG00000087088 36 1 1.000 - - - - - - - - si:ch211-274p24.4 [Source:ZFIN;Acc:ZDB-GENE-091204-337]
54. si:dkey-29p23.3 si:dkey-29p23.3 3 1 1.000 - - - - - - - -
55. TNFRSF14_8 TNFRSF14_8 6 1 - 1.000 - - - - - - -
56. ca4b ENSDARG00000042293 5 1 1.000 - - - - - - - - carbonic anhydrase IV b [Source:ZFIN;Acc:ZDB-GENE-080815-5]
57. mecom ENSDARG00000060808 8 1 - 1.000 - - - - - - - MDS1 and EVI1 complex locus [Source:ZFIN;Acc:ZDB-GENE-050208-123]
58. SERINC4 ENSDARG00000044815 45 1 1.000 - - - - - - - - serine incorporator 4 [Source:ZFIN;Acc:ZDB-GENE-121031-1]
59. si:dkey-17m8.2 ENSDARG00000035797 40 1 - 1.000 - - - - - - - si:dkey-17m8.2 [Source:ZFIN;Acc:ZDB-GENE-110411-234]
60. scn1a 8 1 1.000 - - - - - - - - sodium channel, voltage-gated, type I, alpha, transcript variant X1
61. si:dkey-122c11.4 si:dkey-122c11.4 13 1 1.000 - - - - - - - -
62. si:dkey-179k24.3 si:dkey-179k24.3 3 1 1.000 - - - - - - - -
63. rab3da ENSDARG00000018107 28 1 1.000 - - - - - - - - RAB3D, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-080722-14]
64. zgc:153650 zgc:153650 3 1 - 1.000 - - - - - - -
65. ccdc157 ENSDARG00000056279 31 1 1.000 - - - - - - - - coiled-coil domain containing 157 [Source:ZFIN;Acc:ZDB-GENE-030616-155]
66. ARHGAP6 33 1 - 1.000 - - - - - - - Rho GTPase activating protein 6
67. lzts2b ENSDARG00000077207 22 1 - 1.000 - - - - - - - leucine zipper, putative tumor suppressor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-9587]
68. EPHB1 ENSDARG00000076757 20 1 1.000 - - - - - - - - EPH receptor B1 [Source:ZFIN;Acc:ZDB-GENE-070912-219]
69. si:ch211-132b12.7 ENSDARG00000068374 30 1 1.000 - - - - - - - - si:ch211-132b12.7 [Source:ZFIN;Acc:ZDB-GENE-050419-250]
70. si:dkey-178e17.2 1 1 1.000 - - - - - - - - si:dkey-178e17.2, transcript variant X2
71. fut10 ENSDARG00000100322 22 1 1.000 - - - - - - - - fucosyltransferase 10 [Source:ZFIN;Acc:ZDB-GENE-081022-183]
72. SLC16A7 ENSDARG00000098258 4 1 1.000 - - - - - - - - solute carrier family 16 member 7 [Source:HGNC Symbol;Acc:HGNC:10928]
73. si:dkey-51d8.6 ENSDARG00000090769 17 1 1.000 - - - - - - - - si:dkey-51d8.6 [Source:ZFIN;Acc:ZDB-GENE-110914-115]
74. CABZ01081294.1 CABZ01081294.1 1 1 1.000 - - - - - - - -
75. rgs8 ENSDARG00000070037, ENSDARG00000111478 37 1 1.000 - - - - - - - - regulator of G protein signaling 8 [Source:ZFIN;Acc:ZDB-GENE-040718-264]
76. CD44 CD44 11 1 1.000 - - - - - - - -
77. drd2l ENSDARG00000014858 1 1 1.000 - - - - - - - - dopamine receptor D2 like [Source:ZFIN;Acc:ZDB-GENE-030910-1]
78. fbxo36a ENSDARG00000010662, ENSDARG00000109843 13 1 - 1.000 - - - - - - - F-box protein 36a [Source:ZFIN;Acc:ZDB-GENE-060929-986]
79. ptf1a ENSDARG00000014479 349 1 1.000 - - - - - - - - pancreas associated transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-579]
80. btbd3a ENSDARG00000005544 595 1 1.000 - - - - - - - - BTB (POZ) domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-090312-7]
81. CR848784.2 ENSDARG00000111157 16 1 1.000 - - - - - - - -
82. scn1a_2 1 1 1.000 - - - - - - - - sodium channel, voltage-gated, type I, alpha, transcript variant X1
83. asic1b ENSDARG00000101866 61 1 - 1.000 - - - - - - - acid-sensing (proton-gated) ion channel 1b [Source:ZFIN;Acc:ZDB-GENE-040513-1]
84. si:dkey-222h21.4 1 1 - - - - - - - 1.000 - si:dkey-222h21.4
85. KLHL35 ENSDARG00000063577 77 1 1.000 - - - - - - - - kelch-like family member 35 [Source:ZFIN;Acc:ZDB-GENE-091118-66]
86. xdh ENSDARG00000055240 250 1 1.000 - - - - - - - - xanthine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-070719-9]
87. cradd ENSDARG00000028192 153 1 1.000 - - - - - - - - CASP2 and RIPK1 domain containing adaptor with death domain [Source:ZFIN;Acc:ZDB-GENE-041010-168]
88. zgc:154054 ENSDARG00000099923 19 1 1.000 - - - - - - - - zgc:154054 [Source:ZFIN;Acc:ZDB-GENE-061103-283]
89. wfs1b ENSDARG00000074617 69 1 - 1.000 - - - - - - - Wolfram syndrome 1b (wolframin) [Source:ZFIN;Acc:ZDB-GENE-050809-19]
90. ch25hl2 ENSDARG00000038728 100 1 1.000 - - - - - - - - cholesterol 25-hydroxylase like 2 [Source:ZFIN;Acc:ZDB-GENE-080204-82]
91. si:dkey-58f10.12 ENSDARG00000092680 258 1 - 1.000 - - - - - - - si:dkey-58f10.12 [Source:ZFIN;Acc:ZDB-GENE-060526-314]
92. ADAMTS15_1 ADAMTS15_1 11 1 1.000 - - - - - - - -
93. si:ch73-269m14.3 ENSDARG00000096305 28 1 1.000 - - - - - - - - si:ch73-269m14.3 [Source:ZFIN;Acc:ZDB-GENE-120215-13]
94. ciz1a ENSDARG00000089781 20 1 1.000 - - - - - - - - cdkn1a interacting zinc finger protein 1a [Source:ZFIN;Acc:ZDB-GENE-100922-222]
95. mms19 ENSDARG00000079067 65 1 1.000 - - - - - - - - MMS19 homolog, cytosolic iron-sulfur assembly component [Source:ZFIN;Acc:ZDB-GENE-120316-2]
96. CT826375.4 CT826375.4 3 1 - 1.000 - - - - - - -
97. ptchd4 ENSDARG00000008249 17 1 1.000 - - - - - - - - patched domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041001-178]
98. foxa_1 ENSDARG00000087094, ENSDARG00000110743, ENSDARG00000115019 1 1 - - - - - - - 1.000 - forkhead box A sequence [Source:ZFIN;Acc:ZDB-GENE-990415-76]
99. TRPC4 TRPC4 18 1 - 1.000 - - - - - - -
100. pcdh2ab7 7 1 1.000 - - - - - - - - protocadherin 2 alpha b 7

There are 931 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA