Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-188i4.4

Gene Name Gene ID Reads Annotation
si:ch211-188i4.4 5 si:ch211-188i4.4, transcript variant X3










Genes with expression patterns similar to si:ch211-188i4.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-188i4.4 5 6 1.000 1.000 - 1.000 1.000 - - 1.000 1.000 si:ch211-188i4.4, transcript variant X3
2. mcm5_1 ENSDARG00000019507 10 2 1.000 1.000 - - - - - - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
3. traf1 ENSDARG00000069482 50 2 1.000 1.000 - - - - - - - TNF receptor-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-4]
4. si:dkeyp-82h4.1 ENSDARG00000096463 18 2 1.000 1.000 - - - - - - - si:dkeyp-82h4.1 [Source:ZFIN;Acc:ZDB-GENE-120709-49]
5. si:dkeyp-66a7.1 si:dkeyp-66a7.1 6 2 1.000 1.000 - - - - - - -
6. CR792453.1 ENSDARG00000095699 4 2 - 1.000 - - - - - 1.000 -
7. zgc:112234_5 ENSDARG00000099514, ENSDARG00000102806, ENSDARG00000104588, ENSDARG00000105340, ENSDARG00000105393, ENSDARG00000105414, ENSDARG00000105468, ENSDARG00000105483, ENSDARG00000105507, ENSDARG00000111934 6 2 - 1.000 - - 1.000 - - - - zgc:112234 [Source:NCBI gene;Acc:554097]
8. gna15.3 ENSDARG00000056654, ENSDARG00000092948 9 2 - 1.000 - - - - - 1.000 - guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-050208-700]
9. si:ch211-120c15.1 si:ch211-120c15.1 20 2 1.000 1.000 - - - - - - -
10. bmp1b ENSDARG00000028053 25 2 1.000 1.000 - - - - - - - bone morphogenetic protein 1b [Source:ZFIN;Acc:ZDB-GENE-060818-2]
11. CABZ01049058.1 CABZ01049058.1 7 2 - - - 1.000 - - - 1.000 -
12. lhfpl5a ENSDARG00000045023 2 1.98 - - - - - - - 1.000 0.980 LHFPL tetraspan subfamily member 5a [Source:ZFIN;Acc:ZDB-GENE-110131-8]
13. si:dkey-211i20.3 si:dkey-211i20.3 1 1.941 - - - 0.941 - - - 1.000 -
14. BX469915.2 BX469915.2 48 1.906 1.000 - - - 0.906 - - - -
15. RPGRIP1 ENSDARG00000076055 10 1.887 - 1.000 - - - - - - 0.887 RPGR interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-091204-394]
16. MOB2 MOB2 4 1.844 - 1.000 - - 0.844 - - - -
17. MFAP4_3 MFAP4_3 7 1.844 - 1.000 - - 0.844 - - - -
18. FAM175B FAM175B 23 1.844 1.000 - - - 0.844 - - - -
19. soga3a ENSDARG00000063311, ENSDARG00000088571, ENSDARG00000097245 11 1.844 - - - - 0.844 - - 1.000 - SOGA family member 3a [Source:ZFIN;Acc:ZDB-GENE-100921-84]
20. ODF2 ODF2 6 1.844 - 1.000 - - 0.844 - - - -
21. cmpk2 ENSDARG00000031359 1 1.844 - - - - 0.844 - - 1.000 - cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040724-24]
22. e2f5 ENSDARG00000038812 388 1.829 1.000 - - - - - - - 0.829 E2F transcription factor 5 [Source:ZFIN;Acc:ZDB-GENE-030828-3]
23. chrna6 ENSDARG00000055559 60 1.825 0.825 1.000 - - - - - - - cholinergic receptor, nicotinic, alpha 6 [Source:ZFIN;Acc:ZDB-GENE-090312-91]
24. hsp70l_1 ENSDARG00000055723 72 1.825 0.825 1.000 - - - - - - - heat shock cognate 70-kd protein, like [Source:ZFIN;Acc:ZDB-GENE-050321-1]
25. CABZ01021538.1 CABZ01021538.1 67 1.824 0.824 1.000 - - - - - - -
26. PCDH10 PCDH10 7 1.817 - 1.000 - 0.817 - - - - -
27. antxr2a ENSDARG00000104118, ENSDARG00000111517 12 1.817 - 1.000 - 0.817 - - - - - ANTXR cell adhesion molecule 2a [Source:ZFIN;Acc:ZDB-GENE-060526-14]
28. si:dkey-14o6.7 si:dkey-14o6.7 9 1.817 - 1.000 - 0.817 - - - - -
29. rnf150a_1 ENSDARG00000024827 12 1.817 1.000 - - 0.817 - - - - - ring finger protein 150a [Source:ZFIN;Acc:ZDB-GENE-060213-1]
30. slc13a1 ENSDARG00000045638, ENSDARG00000114835 13 1.817 - 1.000 - 0.817 - - - - - solute carrier family 13 member 1 [Source:ZFIN;Acc:ZDB-GENE-031222-3]
31. olig1 ENSDARG00000040948 1 1.817 - - - 0.817 - - - 1.000 - oligodendrocyte transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050107-2]
32. BX927122.3 BX927122.3 19 1.813 - 1.000 - - - - - - 0.813
33. ompb ENSDARG00000032380, ENSDARG00000115093 12 1.797 - - - 0.962 - - - - 0.835 olfactory marker protein b [Source:ZFIN;Acc:ZDB-GENE-030103-1]
34. FP236851.1 FP236851.1 10 1.791 - 1.000 - - 0.791 - - - -
35. ALOX5_2 ALOX5_2 6 1.764 - 1.000 - - 0.764 - - - -
36. si:dkey-241f21.7 si:dkey-241f21.7 3 1.737 - 1.000 - - 0.737 - - - -
37. si:dkey-24p1.7 ENSDARG00000089404 7 1.709 - 1.000 - - 0.709 - - - - si:dkey-24p1.7 [Source:ZFIN;Acc:ZDB-GENE-121214-215]
38. sc:d217 ENSDARG00000079645 32 1.684 0.809 0.875 - - - - - - - sc:d217 [Source:ZFIN;Acc:ZDB-GENE-080303-15]
39. si:dkey-226m8.9 si:dkey-226m8.9 4 1.623 - - - 0.779 0.844 - - - -
40. si:ch73-173m3.3 si:ch73-173m3.3 425 1.623 0.751 0.872 - - - - - - -
41. SP5 SP5 8 1.617 - - - 0.715 - - - 0.902 -
42. agfg1a ENSDARG00000030020 6 1.52 - - - 0.817 - - - - 0.703 ArfGAP with FG repeats 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5808]
43. stm ENSDARG00000035694 1567 1.518 - - - 0.801 - - - 0.717 - starmaker [Source:ZFIN;Acc:ZDB-GENE-031112-4]
44. rereb ENSDARG00000075670 136 1.463 0.705 - - - - - - - 0.758 arginine-glutamic acid dipeptide (RE) repeats b [Source:ZFIN;Acc:ZDB-GENE-070212-3]
45. cryba2b ENSDARG00000041925 4329 1.445 0.719 - - 0.726 - - - - - crystallin, beta A2b [Source:ZFIN;Acc:ZDB-GENE-040718-324]
46. tcf4 0 1 - - - - - - - 1.000 - transcription factor 4
47. lrrc3b ENSDARG00000063215 0 1 - 1.000 - - - - - - - leucine rich repeat containing 3B [Source:ZFIN;Acc:ZDB-GENE-070410-55]
48. dclre1a ENSDARG00000091768 94 1 - 1.000 - - - - - - - DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-124]
49. prl ENSDARG00000037946 80 1 - 1.000 - - - - - - - prolactin [Source:ZFIN;Acc:ZDB-GENE-030513-1]
50. sowah1 sowah1 1 1 1.000 - - - - - - - -
51. panx1b ENSDARG00000014910, ENSDARG00000112399 136 1 - 1.000 - - - - - - - pannexin 1b [Source:ZFIN;Acc:ZDB-GENE-070705-192]
52. BX649498.2 BX649498.2 40 1 1.000 - - - - - - - -
53. aatkb ENSDARG00000104442 392 1 - 1.000 - - - - - - - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
54. si:ch211-150o20.5 si:ch211-150o20.5 1 1 1.000 - - - - - - - -
55. or115-8 ENSDARG00000092406 1 1 - - - - - - - 1.000 - odorant receptor, family F, subfamily 115, member 8 [Source:ZFIN;Acc:ZDB-GENE-070806-10]
56. MDH1B ENSDARG00000018008 29 1 1.000 - - - - - - - - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
57. pik3r5 ENSDARG00000102762 56 1 1.000 - - - - - - - - phosphoinositide-3-kinase, regulatory subunit 5 [Source:ZFIN;Acc:ZDB-GENE-030131-2308]
58. csf2rb ENSDARG00000076586, ENSDARG00000112627, ENSDARG00000114668 9 1 - 1.000 - - - - - - - colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) [Source:ZFIN;Acc:ZDB-GENE-080115-1]
59. si:dkey-33i11.1 ENSDARG00000053027 2 1 - - - - - - - 1.000 - si:dkey-33i11.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4630]
60. brat1 ENSDARG00000062585 1 1 - - - - - - - 1.000 - BRCA1-associated ATM activator 1 [Source:ZFIN;Acc:ZDB-GENE-060421-6989]
61. col8a1b ENSDARG00000003533 18 1 - 1.000 - - - - - - - collagen, type VIII, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-060503-140]
62. efemp2b ENSDARG00000020811 116 1 1.000 - - - - - - - - EGF containing fibulin extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-030219-125]
63. CR847844.3 CR847844.3 1 1 - - - - - - - 1.000 -
64. itpr2 ENSDARG00000011909 3 1 - 1.000 - - - - - - - inositol 1,4,5-trisphosphate receptor, type 2 [Source:ZFIN;Acc:ZDB-GENE-050419-192]
65. phf21aa ENSDARG00000006878 31 1 - 1.000 - - - - - - - PHD finger protein 21Aa [Source:ZFIN;Acc:ZDB-GENE-050208-99]
66. tbc1d20 ENSDARG00000032298 1 1 - 1.000 - - - - - - - TBC1 domain family, member 20 [Source:ZFIN;Acc:ZDB-GENE-050626-61]
67. nipbla ENSDARG00000098272 26 1 1.000 - - - - - - - - nipped-B homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060526-121]
68. si:ch211-154o6.3_1 ENSDARG00000099846, ENSDARG00000112144 10 1 - 1.000 - - - - - - - si:ch211-154o6.3 [Source:ZFIN;Acc:ZDB-GENE-030131-1030]
69. gpc2 ENSDARG00000104217 10 1 - 1.000 - - - - - - - glypican 2 [Source:ZFIN;Acc:ZDB-GENE-050302-31]
70. CU207301.11 CU207301.11 1 1 - - - - - - - 1.000 -
71. kcnh1a ENSDARG00000024167 9 1 - 1.000 - - - - - - - potassium voltage-gated channel, subfamily H (eag-related), member 1a [Source:ZFIN;Acc:ZDB-GENE-061226-1]
72. tgm1l2 ENSDARG00000101595 0 1 - - - - - - - 1.000 - transglutaminase 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-110408-37]
73. l3mbtl3 ENSDARG00000025983 12 1 1.000 - - - - - - - - l(3)mbt-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040724-127]
74. plscr3a ENSDARG00000093078 7 1 - 1.000 - - - - - - - phospholipid scramblase 3a [Source:ZFIN;Acc:ZDB-GENE-060531-17]
75. actl6b ENSDARG00000034107 9 1 - 1.000 - - - - - - - actin-like 6B [Source:ZFIN;Acc:ZDB-GENE-050522-191]
76. pcyox1 ENSDARG00000103052 20 1 - 1.000 - - - - - - - prenylcysteine oxidase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-98]
77. CR352328.3 CR352328.3 9 1 - - - - - - - 1.000 -
78. CIR1 ENSDARG00000099733 66 1 - 1.000 - - - - - - - corepressor interacting with RBPJ, 1 [Source:HGNC Symbol;Acc:HGNC:24217]
79. si:zfos-1762d12.1 si:zfos-1762d12.1 5 1 - - - - - - - 1.000 -
80. sergef ENSDARG00000070986, ENSDARG00000111782 48 1 - 1.000 - - - - - - - secretion regulating guanine nucleotide exchange factor [Source:ZFIN;Acc:ZDB-GENE-061220-11]
81. CABZ01044085.1 CABZ01044085.1 3 1 1.000 - - - - - - - -
82. fam43b ENSDARG00000070222 92 1 - 1.000 - - - - - - - family with sequence similarity 43, member B [Source:ZFIN;Acc:ZDB-GENE-040912-11]
83. BX569789.4 BX569789.4 3 1 - 1.000 - - - - - - -
84. si:dkey-273g3.2 si:dkey-273g3.2 2 1 - - - - - - - 1.000 -
85. si:dkey-176f19.5 si:dkey-176f19.5 10 1 1.000 - - - - - - - -
86. MCMDC2 0 1 - 1.000 - - - - - - - minichromosome maintenance domain containing 2, transcript variant X2
87. si:dkey-252l8.1 si:dkey-252l8.1 2 1 - - - - - - - 1.000 -
88. hcrt ENSDARG00000070932 4 1 1.000 - - - - - - - - hypocretin (orexin) neuropeptide precursor [Source:ZFIN;Acc:ZDB-GENE-040324-1]
89. RAPGEF4 ENSDARG00000079872 82 1 - 1.000 - - - - - - - Rap guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-385]
90. egr2a ENSDARG00000044098 1101 1 - 1.000 - - - - - - - early growth response 2a [Source:ZFIN;Acc:ZDB-GENE-030723-6]
91. U1_4 U1_4 0 1 - 1.000 - - - - - - -
92. si:dkey-100n10.2 101 1 - 1.000 - - - - - - - si:dkey-100n10.2
93. pabpn1l ENSDARG00000087996, ENSDARG00000113382 40 1 1.000 - - - - - - - - poly(A) binding protein, nuclear 1-like (cytoplasmic) [Source:ZFIN;Acc:ZDB-GENE-080709-5]
94. rxfp2l ENSDARG00000068731 0 1 - - - - - - - 1.000 - relaxin family peptide receptor 2, like [Source:ZFIN;Acc:ZDB-GENE-060531-8]
95. swsap1 ENSDARG00000093423 14 1 - 1.000 - - - - - - - SWIM-type zinc finger 7 associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-071116-2]
96. gad1b ENSDARG00000027419 440 1 - 1.000 - - - - - - - glutamate decarboxylase 1b [Source:ZFIN;Acc:ZDB-GENE-030909-3]
97. zgc:174224_1 ENSDARG00000093875 7 1 - 1.000 - - - - - - - zgc:174224 [Source:ZFIN;Acc:ZDB-GENE-071004-118]
98. si:dkeyp-104f11.4 si:dkeyp-104f11.4 40 1 - 1.000 - - - - - - -
99. si:ch211-67f13.7 ENSDARG00000077845 8 1 - - - - - - - 1.000 - si:ch211-67f13.7 [Source:ZFIN;Acc:ZDB-GENE-090313-126]
100. zgc:174688 zgc:174688 170 1 1.000 - - - - - - - -

There are 950 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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