Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-188i4.4

Gene Name Gene ID Reads Annotation
si:ch211-188i4.4 5 si:ch211-188i4.4, transcript variant X3










Genes with expression patterns similar to si:ch211-188i4.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-188i4.4 5 6 1.000 1.000 - 1.000 1.000 - - 1.000 1.000 si:ch211-188i4.4, transcript variant X3
2. si:dkeyp-82h4.1 ENSDARG00000096463 18 2 1.000 1.000 - - - - - - - si:dkeyp-82h4.1 [Source:ZFIN;Acc:ZDB-GENE-120709-49]
3. mcm5_1 ENSDARG00000019507 10 2 1.000 1.000 - - - - - - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
4. CR792453.1 ENSDARG00000095699 4 2 - 1.000 - - - - - 1.000 -
5. zgc:112234_5 ENSDARG00000099514, ENSDARG00000102806, ENSDARG00000104588, ENSDARG00000105340, ENSDARG00000105393, ENSDARG00000105414, ENSDARG00000105468, ENSDARG00000105483, ENSDARG00000105507, ENSDARG00000111934 6 2 - 1.000 - - 1.000 - - - - zgc:112234 [Source:NCBI gene;Acc:554097]
6. si:ch211-120c15.1 si:ch211-120c15.1 20 2 1.000 1.000 - - - - - - -
7. bmp1b ENSDARG00000028053 25 2 1.000 1.000 - - - - - - - bone morphogenetic protein 1b [Source:ZFIN;Acc:ZDB-GENE-060818-2]
8. CABZ01049058.1 CABZ01049058.1 7 2 - - - 1.000 - - - 1.000 -
9. si:dkeyp-66a7.1 si:dkeyp-66a7.1 6 2 1.000 1.000 - - - - - - -
10. traf1 ENSDARG00000069482 50 2 1.000 1.000 - - - - - - - TNF receptor-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-4]
11. gna15.3 ENSDARG00000056654, ENSDARG00000092948 9 2 - 1.000 - - - - - 1.000 - guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-050208-700]
12. lhfpl5a ENSDARG00000045023 2 1.98 - - - - - - - 1.000 0.980 LHFPL tetraspan subfamily member 5a [Source:ZFIN;Acc:ZDB-GENE-110131-8]
13. si:dkey-211i20.3 si:dkey-211i20.3 1 1.941 - - - 0.941 - - - 1.000 -
14. BX469915.2 BX469915.2 48 1.906 1.000 - - - 0.906 - - - -
15. RPGRIP1 ENSDARG00000076055 10 1.887 - 1.000 - - - - - - 0.887 RPGR interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-091204-394]
16. MOB2 MOB2 4 1.844 - 1.000 - - 0.844 - - - -
17. cmpk2 ENSDARG00000031359 1 1.844 - - - - 0.844 - - 1.000 - cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040724-24]
18. FAM175B FAM175B 23 1.844 1.000 - - - 0.844 - - - -
19. MFAP4_3 MFAP4_3 7 1.844 - 1.000 - - 0.844 - - - -
20. ODF2 ODF2 6 1.844 - 1.000 - - 0.844 - - - -
21. soga3a ENSDARG00000063311, ENSDARG00000088571, ENSDARG00000097245 11 1.844 - - - - 0.844 - - 1.000 - SOGA family member 3a [Source:ZFIN;Acc:ZDB-GENE-100921-84]
22. e2f5 ENSDARG00000038812 388 1.829 1.000 - - - - - - - 0.829 E2F transcription factor 5 [Source:ZFIN;Acc:ZDB-GENE-030828-3]
23. chrna6 ENSDARG00000055559 60 1.825 0.825 1.000 - - - - - - - cholinergic receptor, nicotinic, alpha 6 [Source:ZFIN;Acc:ZDB-GENE-090312-91]
24. hsp70l_1 ENSDARG00000055723 72 1.825 0.825 1.000 - - - - - - - heat shock cognate 70-kd protein, like [Source:ZFIN;Acc:ZDB-GENE-050321-1]
25. CABZ01021538.1 CABZ01021538.1 67 1.824 0.824 1.000 - - - - - - -
26. rnf150a_1 ENSDARG00000024827 12 1.817 1.000 - - 0.817 - - - - - ring finger protein 150a [Source:ZFIN;Acc:ZDB-GENE-060213-1]
27. PCDH10 PCDH10 7 1.817 - 1.000 - 0.817 - - - - -
28. olig1 ENSDARG00000040948 1 1.817 - - - 0.817 - - - 1.000 - oligodendrocyte transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050107-2]
29. antxr2a ENSDARG00000104118, ENSDARG00000111517 12 1.817 - 1.000 - 0.817 - - - - - ANTXR cell adhesion molecule 2a [Source:ZFIN;Acc:ZDB-GENE-060526-14]
30. si:dkey-14o6.7 si:dkey-14o6.7 9 1.817 - 1.000 - 0.817 - - - - -
31. slc13a1 ENSDARG00000045638, ENSDARG00000114835 13 1.817 - 1.000 - 0.817 - - - - - solute carrier family 13 member 1 [Source:ZFIN;Acc:ZDB-GENE-031222-3]
32. BX927122.3 BX927122.3 19 1.813 - 1.000 - - - - - - 0.813
33. ompb ENSDARG00000032380, ENSDARG00000115093 12 1.797 - - - 0.962 - - - - 0.835 olfactory marker protein b [Source:ZFIN;Acc:ZDB-GENE-030103-1]
34. FP236851.1 FP236851.1 10 1.791 - 1.000 - - 0.791 - - - -
35. ALOX5_2 ALOX5_2 6 1.764 - 1.000 - - 0.764 - - - -
36. si:dkey-241f21.7 si:dkey-241f21.7 3 1.737 - 1.000 - - 0.737 - - - -
37. si:dkey-24p1.7 ENSDARG00000089404 7 1.709 - 1.000 - - 0.709 - - - - si:dkey-24p1.7 [Source:ZFIN;Acc:ZDB-GENE-121214-215]
38. sc:d217 ENSDARG00000079645 32 1.684 0.809 0.875 - - - - - - - sc:d217 [Source:ZFIN;Acc:ZDB-GENE-080303-15]
39. si:dkey-226m8.9 si:dkey-226m8.9 4 1.623 - - - 0.779 0.844 - - - -
40. si:ch73-173m3.3 si:ch73-173m3.3 425 1.623 0.751 0.872 - - - - - - -
41. SP5 SP5 8 1.617 - - - 0.715 - - - 0.902 -
42. agfg1a ENSDARG00000030020 6 1.52 - - - 0.817 - - - - 0.703 ArfGAP with FG repeats 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5808]
43. stm ENSDARG00000035694 1567 1.518 - - - 0.801 - - - 0.717 - starmaker [Source:ZFIN;Acc:ZDB-GENE-031112-4]
44. rereb ENSDARG00000075670 136 1.463 0.705 - - - - - - - 0.758 arginine-glutamic acid dipeptide (RE) repeats b [Source:ZFIN;Acc:ZDB-GENE-070212-3]
45. cryba2b ENSDARG00000041925 4329 1.445 0.719 - - 0.726 - - - - - crystallin, beta A2b [Source:ZFIN;Acc:ZDB-GENE-040718-324]
46. esr2b ENSDARG00000034181 20 1 1.000 - - - - - - - - estrogen receptor 2b [Source:ZFIN;Acc:ZDB-GENE-030116-1]
47. n6amt2 7 1 - 1.000 - - - - - - - N-6 adenine-specific DNA methyltransferase 2 (putative), transcript variant X1
48. zgc:113691 ENSDARG00000038898 36 1 1.000 - - - - - - - - zgc:113691 [Source:ZFIN;Acc:ZDB-GENE-050220-7]
49. BX936386.1 ENSDARG00000097166 5 1 - - - - - - - 1.000 -
50. CUL9 2 1 - - - - - - - 1.000 - cullin 9
51. tnxb 30 1 - 1.000 - - - - - - - tenascin XB
52. si:dkey-20d21.12 ENSDARG00000092123 38 1 - 1.000 - - - - - - - si:dkey-20d21.12 [Source:ZFIN;Acc:ZDB-GENE-081104-365]
53. SLC26A6 ENSDARG00000055835, ENSDARG00000097292 62 1 1.000 - - - - - - - - solute carrier family 26, member 6 [Source:ZFIN;Acc:ZDB-GENE-081105-83]
54. FAM117B FAM117B 225 1 - 1.000 - - - - - - -
55. RNaseP_nuc RNaseP_nuc 7 1 - 1.000 - - - - - - -
56. si:ch211-232m19.4 19 1 1.000 - - - - - - - - si:ch211-232m19.4
57. LRG1 LRG1 304 1 - 1.000 - - - - - - -
58. lhx5 ENSDARG00000057936 785 1 - 1.000 - - - - - - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
59. C24H11orf65 C24H11orf65 1 1 - 1.000 - - - - - - -
60. si:dkey-85k15.4 ENSDARG00000095047 25 1 - 1.000 - - - - - - - si:dkey-85k15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-242]
61. BRINP3 BRINP3 11 1 - - - - - - - 1.000 -
62. si:ch211-209j12.4 si:ch211-209j12.4 43 1 1.000 - - - - - - - -
63. CABZ01085979.1 CABZ01085979.1 4 1 - 1.000 - - - - - - -
64. CABZ01023601.1 CABZ01023601.1 1 1 - 1.000 - - - - - - -
65. CABZ01066439.2 CABZ01066439.2 5 1 1.000 - - - - - - - -
66. figf 48 1 - 1.000 - - - - - - - c-fos induced growth factor, transcript variant X2
67. pcdh1g18 ENSDARG00000099447 7 1 - 1.000 - - - - - - - protocadherin 1 gamma 18 [Source:ZFIN;Acc:ZDB-GENE-050609-13]
68. BX897747.3 BX897747.3 0 1 - - - - - - - 1.000 -
69. ttc12 ENSDARG00000056896 97 1 1.000 - - - - - - - - tetratricopeptide repeat domain 12 [Source:ZFIN;Acc:ZDB-GENE-071016-4]
70. si:ch1073-143l10.2 ENSDARG00000094899 32 1 - 1.000 - - - - - - - si:ch1073-143l10.2 [Source:ZFIN;Acc:ZDB-GENE-030131-863]
71. ZBED1_5 ZBED1_5 1 1 - - - - - - - 1.000 -
72. MDH1B ENSDARG00000018008 29 1 1.000 - - - - - - - - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
73. CR848664.1 CR848664.1 12 1 - - - - - - - 1.000 -
74. BX511061.2 BX511061.2 30 1 1.000 - - - - - - - -
75. fam207a_1 ENSDARG00000071500 1 1 - - - - - - - 1.000 - family with sequence similarity 207, member A [Source:ZFIN;Acc:ZDB-GENE-060825-113]
76. arrb2a ENSDARG00000039215 5 1 - 1.000 - - - - - - - arrestin, beta 2a [Source:ZFIN;Acc:ZDB-GENE-030131-29]
77. plscr3a ENSDARG00000093078 7 1 - 1.000 - - - - - - - phospholipid scramblase 3a [Source:ZFIN;Acc:ZDB-GENE-060531-17]
78. egr2a ENSDARG00000044098 1101 1 - 1.000 - - - - - - - early growth response 2a [Source:ZFIN;Acc:ZDB-GENE-030723-6]
79. rxfp2l ENSDARG00000068731 0 1 - - - - - - - 1.000 - relaxin family peptide receptor 2, like [Source:ZFIN;Acc:ZDB-GENE-060531-8]
80. smarcd3b ENSDARG00000019969 11 1 1.000 - - - - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b [Source:ZFIN;Acc:ZDB-GENE-080509-2]
81. si:dkey-20f20.3 si:dkey-20f20.3 7 1 - 1.000 - - - - - - -
82. BX465203.1 ENSDARG00000113985 8 1 1.000 - - - - - - - -
83. itpr2 ENSDARG00000011909 3 1 - 1.000 - - - - - - - inositol 1,4,5-trisphosphate receptor, type 2 [Source:ZFIN;Acc:ZDB-GENE-050419-192]
84. si:dkeyp-104f11.4 si:dkeyp-104f11.4 40 1 - 1.000 - - - - - - -
85. mettl25 ENSDARG00000045754 36 1 - 1.000 - - - - - - - methyltransferase like 25 [Source:ZFIN;Acc:ZDB-GENE-041210-90]
86. si:dkey-33i11.1 ENSDARG00000053027 2 1 - - - - - - - 1.000 - si:dkey-33i11.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4630]
87. wdr17 ENSDARG00000075098 83 1 - 1.000 - - - - - - - WD repeat domain 17 [Source:ZFIN;Acc:ZDB-GENE-090313-131]
88. fermt3a fermt3a 56 1 - 1.000 - - - - - - -
89. SAMHD1 ENSDARG00000071288 0 1 - 1.000 - - - - - - - SAM domain and HD domain 1 [Source:ZFIN;Acc:ZDB-GENE-090313-386]
90. erap2 ENSDARG00000098618 16 1 - 1.000 - - - - - - - endoplasmic reticulum aminopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-080402-6]
91. PLCXD2 ENSDARG00000058200 8 1 - - - - - - - 1.000 - phosphatidylinositol-specific phospholipase C, X domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-091204-217]
92. swsap1 ENSDARG00000093423 14 1 - 1.000 - - - - - - - SWIM-type zinc finger 7 associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-071116-2]
93. zgc:171759_5 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 274 1 1.000 - - - - - - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
94. nid2b ENSDARG00000009471 4 1 - 1.000 - - - - - - - nidogen 2b (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-040724-143]
95. MDFI ENSDARG00000089564 8 1 1.000 - - - - - - - - MyoD family inhibitor [Source:HGNC Symbol;Acc:HGNC:6967]
96. fam219b ENSDARG00000104637 3 1 - 1.000 - - - - - - - family with sequence similarity 219, member B [Source:ZFIN;Acc:ZDB-GENE-050327-82]
97. si:dkeyp-10a3.2 18 1 - 1.000 - - - - - - - si:dkeyp-10a3.2
98. SLC4A8 ENSDARG00000015531 16 1 - - - 1.000 - - - - - solute carrier family 4, sodium bicarbonate cotransporter, member 8 [Source:ZFIN;Acc:ZDB-GENE-131119-88]
99. zgc:174688 zgc:174688 170 1 1.000 - - - - - - - -
100. lars2 ENSDARG00000075337 31 1 1.000 - - - - - - - - leucyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-070928-3]

There are 950 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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