Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-188c16.1

Gene Name Gene ID Reads Annotation
si:ch211-188c16.1 ENSDARG00000077288 16 si:ch211-188c16.1 [Source:ZFIN;Acc:ZDB-GENE-070912-162]










Genes with expression patterns similar to si:ch211-188c16.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-188c16.1 ENSDARG00000077288 16 5 - 1.000 1.000 - 1.000 1.000 - 1.000 - si:ch211-188c16.1 [Source:ZFIN;Acc:ZDB-GENE-070912-162]
2. LRRC61 ENSDARG00000077357 55 1.991 - 0.991 - - - 1.000 - - - leucine rich repeat containing 61 [Source:ZFIN;Acc:ZDB-GENE-060616-245]
3. si:ch211-267j24.2 si:ch211-267j24.2 7 1.976 - 0.976 - - - 1.000 - - -
4. DNAI2 DNAI2 6 1.971 - - - - 0.971 1.000 - - -
5. TEKT4 ENSDARG00000028899 47 1.958 - - 0.987 - 0.971 - - - - tektin 4 [Source:ZFIN;Acc:ZDB-GENE-070410-98]
6. SLC35A3_1 SLC35A3_1 35 1.951 - - - - 0.951 1.000 - - -
7. BX571880.1 ENSDARG00000097533 499 1.941 - 0.941 - - - 1.000 - - -
8. si:dkey-13n15.11 ENSDARG00000078002 8 1.896 - 0.896 - - - 1.000 - - - si:dkey-13n15.11 [Source:ZFIN;Acc:ZDB-GENE-070705-295]
9. mir196b ENSDARG00000081346 35 1.88 - 0.880 - - - 1.000 - - - microRNA 196b [Source:ZFIN;Acc:ZDB-MIRNAG-081212-1]
10. STEAP2 ENSDARG00000062887 59 1.831 - 0.956 - - - 0.875 - - - STEAP family member 2, metalloreductase [Source:ZFIN;Acc:ZDB-GENE-131121-79]
11. TMEM235 ENSDARG00000089276 58 1.83 - 0.936 0.894 - - - - - - transmembrane protein 235 [Source:ZFIN;Acc:ZDB-GENE-130603-43]
12. SNAPC2 ENSDARG00000036473 158 1.787 - 1.000 - - - 0.787 - - - small nuclear RNA activating complex, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-120328-2]
13. MDH1B ENSDARG00000018008 29 1.78 - - - - 0.780 1.000 - - - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
14. has3 ENSDARG00000057210, ENSDARG00000116537 108 1.779 - - 0.779 - - 1.000 - - - hyaluronan synthase 3 [Source:ZFIN;Acc:ZDB-GENE-021118-1]
15. INSM2 ENSDARG00000020655 122 1.747 - - 0.747 - - 1.000 - - - INSM transcriptional repressor 2 [Source:HGNC Symbol;Acc:HGNC:17539]
16. BX004880.2 BX004880.2 83 1.745 - 0.803 - - 0.942 - - - -
17. si:zfos-979f1.2 ENSDARG00000011652 24 1.719 - 0.842 - - - 0.877 - - - si:zfos-979f1.2 [Source:ZFIN;Acc:ZDB-GENE-091204-441]
18. arl2bp ENSDARG00000025383, ENSDARG00000114401 576 1.71 - 0.919 0.791 - - - - - - ADP-ribosylation factor-like 2 binding protein [Source:ZFIN;Acc:ZDB-GENE-040426-1604]
19. crfb4 ENSDARG00000068711 51 1.699 - 0.859 0.840 - - - - - - cytokine receptor family member b4 [Source:ZFIN;Acc:ZDB-GENE-070905-3]
20. slc35d1b ENSDARG00000027986 138 1.692 - 0.788 - - 0.904 - - - - solute carrier family 35 (UDP-GlcA/UDP-GalNAc transporter), member D1b [Source:ZFIN;Acc:ZDB-GENE-040426-1213]
21. SHPRH ENSDARG00000075884 382 1.691 - 0.858 - - 0.833 - - - - SNF2 histone linker PHD RING helicase [Source:ZFIN;Acc:ZDB-GENE-110512-2]
22. tefm ENSDARG00000100548, ENSDARG00000114690, ENSDARG00000114872 140 1.68 - 0.876 0.804 - - - - - - transcription elongation factor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-060825-345]
23. CSPP1 68 1.68 - 0.974 - - 0.706 - - - - centrosome and spindle pole associated protein 1, transcript variant X6
24. F2RL2 ENSDARG00000090524 211 1.673 - - 0.799 - 0.874 - - - - coagulation factor II (thrombin) receptor-like 2 [Source:ZFIN;Acc:ZDB-GENE-110127-4]
25. rpph1 33 1.659 - - - - 0.957 0.702 - - - ribonuclease P RNA component H1
26. pou5f3 ENSDARG00000044774 212 1.649 - - 0.771 - 0.878 - - - - POU domain, class 5, transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-980526-485]
27. TP53I3 60 1.634 - 0.916 - - - 0.718 - - - tumor protein p53 inducible protein 3, transcript variant X1
28. C5H5orf34 C5H5orf34 69 1.613 - - - - 0.867 0.746 - - -
29. si:busm1-57f23.1 ENSDARG00000074425 418 1.59 - - 0.771 - 0.819 - - - - si:busm1-57f23.1 [Source:ZFIN;Acc:ZDB-GENE-030616-512]
30. zgc:165515 ENSDARG00000116300 182 1.564 - - 0.757 - - 0.807 - - - zgc:165515 [Source:ZFIN;Acc:ZDB-GENE-030131-1772]
31. myf5 ENSDARG00000007277 1051 1.56 - - 0.767 - 0.793 - - - - myogenic factor 5 [Source:ZFIN;Acc:ZDB-GENE-000616-6]
32. si:ch211-269i23.2 432 1.538 - 0.769 - - 0.769 - - - - si:ch211-269i23.2, transcript variant X3
33. mid2 ENSDARG00000034871 1001 1.532 - 0.815 0.717 - - - - - - midline 2 [Source:ZFIN;Acc:ZDB-GENE-090220-1]
34. ripply1 ENSDARG00000054103 367 1.525 - - 0.760 - 0.765 - - - - ripply transcriptional repressor 1 [Source:ZFIN;Acc:ZDB-GENE-060113-1]
35. sepn1 801 1.489 - 0.742 - - 0.747 - - - - selenoprotein N, 1
36. cherp ENSDARG00000021812 286 1.478 - - 0.706 - 0.772 - - - - calcium homeostasis endoplasmic reticulum protein [Source:ZFIN;Acc:ZDB-GENE-040407-1]
37. RPUSD2 ENSDARG00000060992 107 1.477 - 0.739 - - 0.738 - - - - RNA pseudouridylate synthase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120411-43]
38. topbp1 ENSDARG00000059322 241 1.446 - 0.705 - - - 0.741 - - - DNA topoisomerase II binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060626-1]
39. tmem107l ENSDARG00000088398, ENSDARG00000109909 208 1.416 - 0.710 0.706 - - - - - - transmembrane protein 107 like [Source:ZFIN;Acc:ZDB-GENE-090313-269]
40. camk1ga ENSDARG00000044526 5 1 - 1.000 - - - - - - - calcium/calmodulin-dependent protein kinase IGa [Source:ZFIN;Acc:ZDB-GENE-030131-7594]
41. myh6 ENSDARG00000090637 66 1 - - - - - 1.000 - - - myosin, heavy chain 6, cardiac muscle, alpha [Source:ZFIN;Acc:ZDB-GENE-031112-1]
42. CR774199.1 CR774199.1 1 1 - - - - - 1.000 - - -
43. C22H19orf10_1 C22H19orf10_1 30 1 - - - - - 1.000 - - -
44. si:ch211-114l13.3 ENSDARG00000094346 2 1 - - - - - 1.000 - - - si:ch211-114l13.3 [Source:ZFIN;Acc:ZDB-GENE-070424-112]
45. wnt8b ENSDARG00000006911 98 1 - 1.000 - - - - - - - wingless-type MMTV integration site family, member 8b [Source:ZFIN;Acc:ZDB-GENE-990415-279]
46. arhgap20 ENSDARG00000089326 10 1 - - - - - 1.000 - - - Rho GTPase activating protein 20 [Source:ZFIN;Acc:ZDB-GENE-071015-1]
47. CU464087.2 CU464087.2 15 1 - - - - - 1.000 - - -
48. ms4a17a.17 ENSDARG00000054898, ENSDARG00000116378 37 1 - - - - - 1.000 - - - membrane-spanning 4-domains, subfamily A, member 17A.17 [Source:ZFIN;Acc:ZDB-GENE-070424-27]
49. si:dkey-217m5.3 si:dkey-217m5.3 22 1 - - - - - 1.000 - - -
50. f9b ENSDARG00000029493, ENSDARG00000111567 119 1 - 1.000 - - - - - - - coagulation factor IXb [Source:ZFIN;Acc:ZDB-GENE-060421-7346]
51. nr1h4 ENSDARG00000057741, ENSDARG00000113600 24 1 - 1.000 - - - - - - - nuclear receptor subfamily 1, group H, member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-313]
52. zgc:174680 ENSDARG00000100702 3 1 - - - - - 1.000 - - - zgc:174680 [Source:ZFIN;Acc:ZDB-GENE-080204-24]
53. zgc:173443 ENSDARG00000034403 26 1 - - - - - 1.000 - - - zgc:173443 [Source:ZFIN;Acc:ZDB-GENE-071004-101]
54. runx2b ENSDARG00000059233 106 1 - 1.000 - - - - - - - runt-related transcription factor 2b [Source:ZFIN;Acc:ZDB-GENE-040629-4]
55. cnih2 ENSDARG00000043662, ENSDARG00000110467, ENSDARG00000113176 74 1 - - - - - 1.000 - - - cornichon family AMPA receptor auxiliary protein 2 [Source:ZFIN;Acc:ZDB-GENE-050320-96]
56. ighz ENSDARG00000096280 2 1 - 1.000 - - - - - - - immunoglobulin heavy constant zeta [Source:ZFIN;Acc:ZDB-GENE-040513-8]
57. BX510909.1 ENSDARG00000104294 5 1 - 1.000 - - - - - - -
58. smarcd3b ENSDARG00000019969 11 1 - - - - - 1.000 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b [Source:ZFIN;Acc:ZDB-GENE-080509-2]
59. si:dkey-9i5.1 si:dkey-9i5.1 36 1 - - - - - 1.000 - - -
60. KIAA0319 KIAA0319 2 1 - - - - - 1.000 - - -
61. si:ch211-241n15.3 ENSDARG00000088915 5 1 - - - - - 1.000 - - - si:ch211-241n15.3 [Source:ZFIN;Acc:ZDB-GENE-110913-169]
62. si:ch211-76l23.4 ENSDARG00000096242 202 1 - 1.000 - - - - - - - si:ch211-76l23.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8310]
63. smad6b ENSDARG00000031763 12 1 - 1.000 - - - - - - - SMAD family member 6b [Source:ZFIN;Acc:ZDB-GENE-050419-198]
64. or103-5 ENSDARG00000075128 1 1 - - - - - 1.000 - - - odorant receptor, family C, subfamily 103, member 5 [Source:ZFIN;Acc:ZDB-GENE-070806-52]
65. si:ch211-160d20.5 ENSDARG00000089627 2 1 - - - - - 1.000 - - - si:ch211-160d20.5 [Source:ZFIN;Acc:ZDB-GENE-050420-242]
66. SOX8 SOX8 22 1 - - - - - 1.000 - - -
67. SNORD94 SNORD94 57 1 - - - - - 1.000 - - -
68. acoxl ENSDARG00000020149 14 1 - 1.000 - - - - - - - acyl-CoA oxidase-like [Source:ZFIN;Acc:ZDB-GENE-081107-18]
69. ssh1b ENSDARG00000010031 4 1 - - - - - 1.000 - - - slingshot protein phosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5909]
70. ddx46 ENSDARG00000099458 24 1 - - - - - 1.000 - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Source:ZFIN;Acc:ZDB-GENE-030131-667]
71. hyal3 ENSDARG00000036818 23 1 - - - - - 1.000 - - - hyaluronoglucosaminidase 3 [Source:ZFIN;Acc:ZDB-GENE-081104-366]
72. CR392036.1 ENSDARG00000069895 1 1 - - - - - 1.000 - - - GTPase IMAP family member 8-like [Source:NCBI gene;Acc:101884429]
73. GPR180 73 1 - - - - - 1.000 - - - G protein-coupled receptor 180, transcript variant X2
74. cryba1l2 ENSDARG00000014803 47 1 - - - - - 1.000 - - - crystallin, beta A1, like 2 [Source:ZFIN;Acc:ZDB-GENE-041010-40]
75. DEF6 DEF6 19 1 - 1.000 - - - - - - -
76. si:rp71-23d18.4 ENSDARG00000092779 1 1 - - - - - 1.000 - - - si:rp71-23d18.4 [Source:ZFIN;Acc:ZDB-GENE-050208-761]
77. si:ch211-51n3.1 si:ch211-51n3.1 26 1 - 1.000 - - - - - - -
78. si:dkeyp-15f12.4 si:dkeyp-15f12.4 2 1 - 1.000 - - - - - - -
79. WNK3 WNK3 36 1 - - - - - 1.000 - - -
80. PSMB11_1 PSMB11_1 2 1 - - - - - 1.000 - - -
81. ZSWIM2 ENSDARG00000075700 8 1 - - - - - 1.000 - - - zinc finger, SWIM-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-070719-8]
82. gad1a ENSDARG00000093411 2 1 - - - - - 1.000 - - - glutamate decarboxylase 1a [Source:ZFIN;Acc:ZDB-GENE-070912-472]
83. skila ENSDARG00000023933 2 1 - 1.000 - - - - - - - SKI-like proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-070912-548]
84. arntl2 ENSDARG00000041381, ENSDARG00000109690, ENSDARG00000116327 56 1 - - - - - 1.000 - - - aryl hydrocarbon receptor nuclear translocator-like 2 [Source:ZFIN;Acc:ZDB-GENE-000509-2]
85. CHST8 23 1 - - - - - 1.000 - - - carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8, transcript variant X1
86. ddit4 ENSDARG00000037618 37 1 - - - - - 1.000 - - - DNA-damage-inducible transcript 4 [Source:ZFIN;Acc:ZDB-GENE-031002-35]
87. abcg1 ENSDARG00000063475 97 1 - - - - - 1.000 - - - ATP-binding cassette, sub-family G (WHITE), member 1 [Source:ZFIN;Acc:ZDB-GENE-070424-84]
88. EP400 ENSDARG00000100965 45 1 - - - - - 1.000 - - - E1A binding protein p400 [Source:ZFIN;Acc:ZDB-GENE-081104-186]
89. CR383676.3_2 CR383676.3_2 9 1 - - - - - 1.000 - - -
90. ATP6V1C2 ENSDARG00000070440 2 1 - - - - - 1.000 - - - ATPase H+ transporting V1 subunit C2 [Source:ZFIN;Acc:ZDB-GENE-131127-65]
91. RAB1B RAB1B 20 1 - - - - - 1.000 - - -
92. pdgfra ENSDARG00000070494, ENSDARG00000113952 6 1 - 1.000 - - - - - - - platelet-derived growth factor receptor, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-208]
93. Metazoa_SRP_5 Metazoa_SRP_5 2 1 - - - - - 1.000 - - -
94. pcdh1g2 ENSDARG00000101232 5 1 - - - - - 1.000 - - - protocadherin 1 gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050608-2]
95. CABZ01083834.1 CABZ01083834.1 38 1 - 1.000 - - - - - - -
96. si:dkey-200l5.4 ENSDARG00000095294 13 1 - - - - - 1.000 - - - si:dkey-200l5.4 [Source:ZFIN;Acc:ZDB-GENE-091204-393]
97. CABZ01076533.1 CABZ01076533.1 2 1 - 1.000 - - - - - - -
98. anxa2b ENSDARG00000053625, ENSDARG00000116775, ENSDARG00000117092 55 1 - 1.000 - - - - - - - annexin A2b [Source:ZFIN;Acc:ZDB-GENE-030131-1089]
99. CABZ01074298.1 ENSDARG00000087767 6 1 - - - - - 1.000 - - - uncharacterized LOC100334396 [Source:NCBI gene;Acc:100334396]
100. CR936540.2 CR936540.2 4 1 - - - - - 1.000 - - -

There are 873 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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