Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-187f22.2

Gene Name Gene ID Reads Annotation
si:ch211-187f22.2 si:ch211-187f22.2 7










Genes with expression patterns similar to si:ch211-187f22.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-187f22.2 si:ch211-187f22.2 7 7 1.000 - 1.000 1.000 1.000 - 1.000 1.000 1.000
2. grm1a ENSDARG00000026796 9 2 1.000 - 1.000 - - - - - - glutamate receptor, metabotropic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7893]
3. CR318629.1 CR318629.1 7 2 - - 1.000 - - - 1.000 - -
4. ZNF135_1 ZNF135_1 1 2 1.000 - 1.000 - - - - - -
5. si:dkeyp-35e5.1 si:dkeyp-35e5.1 12 2 1.000 - 1.000 - - - - - -
6. ddrgk1 ENSDARG00000037172 14 2 1.000 - - - - - - - 1.000 DDRGK domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1050]
7. VDAC3 ENSDARG00000003695 34 1.972 1.000 - - 0.972 - - - - - voltage-dependent anion channel 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2380]
8. scospondin ENSDARG00000067859 4 1.972 1.000 - - 0.972 - - - - - subcommissural organ spondin [Source:ZFIN;Acc:ZDB-GENE-051114-1]
9. lrp1ba ENSDARG00000004789, ENSDARG00000094171 3 1.876 1.000 - - - - - - - 0.876 low density lipoprotein receptor-related protein 1Ba [Source:ZFIN;Acc:ZDB-GENE-050208-608]
10. si:ch211-234c11.1 si:ch211-234c11.1 3 1.847 - - 1.000 - - - - - 0.847
11. SCARB2 SCARB2 24 1.834 1.000 - - - - - - - 0.834
12. apof ENSDARG00000090980 145 1.815 1.000 - - - - - 0.815 - - apolipoprotein F [Source:ZFIN;Acc:ZDB-GENE-031204-36]
13. mir124-1 10 1.797 1.000 - - 0.797 - - - - - microRNA 124-1
14. si:dkey-233e3.5 si:dkey-233e3.5 7 1.777 1.000 - 0.777 - - - - - -
15. tdrd1 ENSDARG00000007465, ENSDARG00000109298 17 1.763 1.000 - 0.763 - - - - - - tudor domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-070803-1]
16. EVI5L ENSDARG00000052766 8 1.739 1.000 - - - - - - - 0.739 ecotropic viral integration site 5 like [Source:HGNC Symbol;Acc:HGNC:30464]
17. kcnk10b ENSDARG00000045956 43 1.737 1.000 - - - - - - - 0.737 potassium channel, subfamily K, member 10b [Source:ZFIN;Acc:ZDB-GENE-050420-31]
18. si:ch211-268b13.3 si:ch211-268b13.3 28 1.705 1.000 - - - - - 0.705 - -
19. CABZ01069519.1 CABZ01069519.1 64 1.545 0.749 - - - - - 0.796 - -
20. tekt3 ENSDARG00000045038 9 1 - - - - - - 1.000 - - tektin 3 [Source:ZFIN;Acc:ZDB-GENE-080130-2]
21. psmb9a ENSDARG00000000656 16 1 1.000 - - - - - - - - proteasome subunit beta 9a [Source:ZFIN;Acc:ZDB-GENE-990415-140]
22. hepacam 73 1 - - - - - - 1.000 - - hepatic and glial cell adhesion molecule, transcript variant X2
23. gsdf ENSDARG00000075301 6 1 - - - - - - 1.000 - - gonadal somatic cell derived factor [Source:ZFIN;Acc:ZDB-GENE-101029-3]
24. gfra2b ENSDARG00000044015 5 1 1.000 - - - - - - - - GDNF family receptor alpha 2b [Source:ZFIN;Acc:ZDB-GENE-091204-26]
25. gpr88 24 1 1.000 - - - - - - - - G protein-coupled receptor 88
26. N4BP3 ENSDARG00000060007 0 1 - - 1.000 - - - - - - NEDD4 binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-141216-2]
27. shisa9 shisa9 35 1 1.000 - - - - - - - -
28. rag2 ENSDARG00000052121 15 1 1.000 - - - - - - - - recombination activating gene 2 [Source:ZFIN;Acc:ZDB-GENE-990415-235]
29. si:dkey-208k22.2 si:dkey-208k22.2 9 1 - - 1.000 - - - - - -
30. U1_32 U1_32 2 1 1.000 - - - - - - - -
31. cadpsa ENSDARG00000043661 160 1 1.000 - - - - - - - - Ca2+-dependent activator protein for secretion a [Source:ZFIN;Acc:ZDB-GENE-030616-525]
32. poln ENSDARG00000103961, ENSDARG00000113911 57 1 - - - - - - 1.000 - - polymerase (DNA directed) nu [Source:ZFIN;Acc:ZDB-GENE-100917-1]
33. fkbp5 ENSDARG00000028396 20 1 1.000 - - - - - - - - FK506 binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-030616-630]
34. si:dkey-208n4.1 si:dkey-208n4.1 10 1 - - - - - - 1.000 - -
35. hcn3 ENSDARG00000027192 6 1 - - - - - - 1.000 - - hyperpolarization activated cyclic nucleotide-gated potassium channel 3 [Source:ZFIN;Acc:ZDB-GENE-060503-193]
36. si:dkeyp-69e1.8 ENSDARG00000055731 35 1 1.000 - - - - - - - - si:dkeyp-69e1.8 [Source:ZFIN;Acc:ZDB-GENE-070912-676]
37. cpa6 ENSDARG00000012013 73 1 1.000 - - - - - - - - carboxypeptidase A6 [Source:ZFIN;Acc:ZDB-GENE-091204-331]
38. pnpla4 ENSDARG00000069834, ENSDARG00000110613 15 1 - - 1.000 - - - - - - patatin-like phospholipase domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070410-74]
39. BX323882.1 ENSDARG00000101656 2 1 - - 1.000 - - - - - - butyrophilin subfamily 2 member A2-like [Source:NCBI gene;Acc:563995]
40. lonrf1 ENSDARG00000075048 13 1 1.000 - - - - - - - - LON peptidase N-terminal domain and ring finger 1 [Source:ZFIN;Acc:ZDB-GENE-101021-4]
41. si:dkey-148a12.2 si:dkey-148a12.2 1 1 1.000 - - - - - - - -
42. ZNF608 3 1 - - 1.000 - - - - - - zinc finger protein 608, transcript variant X2
43. si:ch211-155d24.7 si:ch211-155d24.7 17 1 - - - - - - 1.000 - -
44. ednrb1b ednrb1b 0 1 - - 1.000 - - - - - -
45. CABZ01058371.1 CABZ01058371.1 23 1 - - 1.000 - - - - - -
46. TDRD15 TDRD15 46 1 1.000 - - - - - - - -
47. tas1r3 ENSDARG00000006341 3 1 - - - - - - 1.000 - - taste receptor, type 1, member 3 [Source:ZFIN;Acc:ZDB-GENE-070917-3]
48. lppr2a lppr2a 19 1 1.000 - - - - - - - -
49. si:ch211-113a14.15_2 37 1 1.000 - - - - - - - - si:ch211-113a14.15
50. CT027705.3 CT027705.3 9 1 1.000 - - - - - - - -
51. BX322612.1 BX322612.1 236 1 - - - - - - 1.000 - -
52. si:ch211-238e22.2 ENSDARG00000112450 23 1 1.000 - - - - - - - - si:ch211-238e22.2 [Source:ZFIN;Acc:ZDB-GENE-041210-346]
53. MPP4 MPP4 1 1 1.000 - - - - - - - -
54. p2rx7 ENSDARG00000042440, ENSDARG00000116000 0 1 - - 1.000 - - - - - - purinergic receptor P2X, ligand-gated ion channel, 7 [Source:ZFIN;Acc:ZDB-GENE-030319-6]
55. KLHDC8A ENSDARG00000061000 13 1 1.000 - - - - - - - - kelch domain containing 8A [Source:ZFIN;Acc:ZDB-GENE-120810-3]
56. pdcb ENSDARG00000017634 10 1 - - 1.000 - - - - - - phosducin b [Source:ZFIN;Acc:ZDB-GENE-031023-2]
57. CU929145.3 ENSDARG00000097274 3 1 1.000 - - - - - - - -
58. ZNF337_10 ZNF337_10 183 1 1.000 - - - - - - - -
59. zglp1 ENSDARG00000067669 6 1 - - - - - - 1.000 - - zinc finger, GATA-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-359]
60. MFAP4 ENSDARG00000090783 8 1 - - - - - - 1.000 - - microfibril associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2246]
61. RBBP6_4 RBBP6_4 4 1 - - - 1.000 - - - - -
62. trpm2 ENSDARG00000095696, ENSDARG00000101641 1 1 - - 1.000 - - - - - - transient receptor potential cation channel, subfamily M, member 2 [Source:ZFIN;Acc:ZDB-GENE-061214-4]
63. mcm6l ENSDARG00000033231, ENSDARG00000111624 23 1 1.000 - - - - - - - - MCM6 minichromosome maintenance deficient 6, like [Source:ZFIN;Acc:ZDB-GENE-050913-141]
64. CT573256.1 ENSDARG00000091657 18 1 - - - - - - 1.000 - - serine/threonine-protein kinase VRK1-like [Source:NCBI gene;Acc:794952]
65. si:dkey-52j6.1 si:dkey-52j6.1 3 1 - - - - - - 1.000 - -
66. TMEM57 TMEM57 260 1 1.000 - - - - - - - -
67. C17orf105 C17orf105 1 1 - - - - - - 1.000 - -
68. SGCZ ENSDARG00000106258 2 1 - - - - - - 1.000 - - sarcoglycan zeta [Source:HGNC Symbol;Acc:HGNC:14075]
69. DUSP23 DUSP23 121 1 1.000 - - - - - - - -
70. pdcl ENSDARG00000009480 12 1 - - - - - - 1.000 - - phosducin-like [Source:ZFIN;Acc:ZDB-GENE-030131-2365]
71. si:dkey-31f5.8 ENSDARG00000094428 2 1 - - - - - - 1.000 - - si:dkey-31f5.8 [Source:ZFIN;Acc:ZDB-GENE-041210-182]
72. PDE4B PDE4B 13 1 - - - - - - 1.000 - -
73. si:dkey-188p4.1 si:dkey-188p4.1 1 1 1.000 - - - - - - - -
74. U5_4 U5_4 1 1 1.000 - - - - - - - -
75. cacng8a ENSDARG00000020450 32 1 1.000 - - - - - - - - calcium channel, voltage-dependent, gamma subunit 8a [Source:ZFIN;Acc:ZDB-GENE-050417-239]
76. ascc2 ENSDARG00000013058 228 1 1.000 - - - - - - - - activating signal cointegrator 1 complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1223]
77. aff4 ENSDARG00000001857 134 1 - - - - - - 1.000 - - AF4/FMR2 family, member 4 [Source:ZFIN;Acc:ZDB-GENE-100910-5]
78. si:ch73-287n15.1 si:ch73-287n15.1 20 1 1.000 - - - - - - - -
79. nr5a1a ENSDARG00000103176 12 1 1.000 - - - - - - - - nuclear receptor subfamily 5, group A, member 1a [Source:ZFIN;Acc:ZDB-GENE-010504-1]
80. CR848787.1 CR848787.1 2 1 - - 1.000 - - - - - -
81. lrguk ENSDARG00000069698 5 1 1.000 - - - - - - - - leucine-rich repeats and guanylate kinase domain containing [Source:ZFIN;Acc:ZDB-GENE-050419-232]
82. si:dkeyp-46h3.3 ENSDARG00000092887 11 1 1.000 - - - - - - - - si:dkeyp-46h3.3 [Source:ZFIN;Acc:ZDB-GENE-060503-748]
83. si:ch211-190g11.1 si:ch211-190g11.1 0 1 - - - - - - 1.000 - -
84. CU424462.2 CU424462.2 73 1 1.000 - - - - - - - -
85. DRAXIN ENSDARG00000058256, ENSDARG00000111676 152 1 1.000 - - - - - - - - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
86. tmem199 ENSDARG00000069314, ENSDARG00000112510 36 1 1.000 - - - - - - - - transmembrane protein 199 [Source:ZFIN;Acc:ZDB-GENE-050522-150]
87. foxb1b ENSDARG00000053650, ENSDARG00000110408, ENSDARG00000113373 51 1 1.000 - - - - - - - - forkhead box B1b [Source:ZFIN;Acc:ZDB-GENE-990415-77]
88. pak1 ENSDARG00000103959 32 1 - - - - - - 1.000 - - p21 protein (Cdc42/Rac)-activated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030826-29]
89. CU694952.2 CU694952.2 3 1 - - 1.000 - - - - - -
90. ZNF768 ZNF768 1 1 - - 1.000 - - - - - -
91. iqsec3a ENSDARG00000099850, ENSDARG00000116182 12 1 1.000 - - - - - - - - IQ motif and Sec7 domain 3a [Source:ZFIN;Acc:ZDB-GENE-041210-343]
92. kl ENSDARG00000079862 13 1 - - 1.000 - - - - - - klotho [Source:ZFIN;Acc:ZDB-GENE-110221-1]
93. si:ch211-284e13.11 ENSDARG00000091997 3 1 - - 1.000 - - - - - - si:ch211-284e13.11 [Source:ZFIN;Acc:ZDB-GENE-060526-157]
94. uts1 ENSDARG00000014927 35 1 1.000 - - - - - - - - urotensin 1 [Source:ZFIN;Acc:ZDB-GENE-041014-348]
95. slc24a1 ENSDARG00000041431 33 1 1.000 - - - - - - - - solute carrier family 24 (sodium/potassium/calcium exchanger), member 1 [Source:ZFIN;Acc:ZDB-GENE-060503-191]
96. atrnl1a ENSDARG00000077188 66 1 1.000 - - - - - - - - attractin-like 1a [Source:ZFIN;Acc:ZDB-GENE-081028-60]
97. C25HXorf38_1 C25HXorf38_1 35 1 1.000 - - - - - - - -
98. sox11a ENSDARG00000077811 25 1 1.000 - - - - - - - - SRY (sex determining region Y)-box 11a [Source:ZFIN;Acc:ZDB-GENE-980526-395]
99. si:dkey-30c15.9 si:dkey-30c15.9 4 1 - - 1.000 - - - - - -
100. CU302326.1 CU302326.1 1 1 - - 1.000 - - - - - -

There are 633 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA