Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-187d1.1

Gene Name Gene ID Reads Annotation
si:ch211-187d1.1 si:ch211-187d1.1 4










Genes with expression patterns similar to si:ch211-187d1.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-187d1.1 si:ch211-187d1.1 4 5 - - 1.000 1.000 - - 1.000 1.000 1.000
2. ppm1na ENSDARG00000010231 3 2 - - - - - - 1.000 - 1.000 protein phosphatase, Mg2+/Mn2+ dependent, 1Na (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-2731]
3. pnp4b ENSDARG00000029230 6 2 - - - - - - 1.000 - 1.000 purine nucleoside phosphorylase 4b [Source:ZFIN;Acc:ZDB-GENE-040426-1887]
4. DNM2 DNM2 2 2 - - 1.000 - - - 1.000 - -
5. oxtrl ENSDARG00000044175 10 1.97 - - - - - - 1.000 - 0.970 oxytocin receptor like [Source:ZFIN;Acc:ZDB-GENE-110805-1]
6. zgc:152698 32 1.956 - - 1.000 - - - - - 0.956 zgc:152698
7. dnah7 ENSDARG00000060165 21 1.852 - - - 0.852 - - 1.000 - - dynein, axonemal, heavy chain 7 [Source:ZFIN;Acc:ZDB-GENE-070912-282]
8. CREB3L3 CREB3L3 24 1.852 - - - 0.852 - - - - 1.000
9. CLCN2 CLCN2 8 1.852 - - - 0.852 - - 1.000 - -
10. AL935141.5 AL935141.5 24 1.852 - - - 0.852 - - - - 1.000
11. TMEM241 ENSDARG00000090685 11 1.852 - - - 0.852 - - - - 1.000 transmembrane protein 241 [Source:ZFIN;Acc:ZDB-GENE-131127-368]
12. si:dkey-27n6.5 23 1.817 - - 0.817 - - - 1.000 - - si:dkey-27n6.5
13. hsd3b1 ENSDARG00000069926 35 1.811 - - - 0.852 - - - - 0.959 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 [Source:ZFIN;Acc:ZDB-GENE-081105-30]
14. mirlet7a-6 15 1.808 - - - 0.852 - - 0.956 - - microRNA let7a-6
15. cabp5a ENSDARG00000002576 14 1.799 - - - - - - 1.000 0.799 - calcium binding protein 5a [Source:ZFIN;Acc:ZDB-GENE-040426-1655]
16. ZNF337_23 ZNF337_23 39 1.749 - - 0.749 - - - 1.000 - -
17. vipr1b ENSDARG00000059058 62 1.635 - - - - - - 0.809 - 0.826 vasoactive intestinal peptide receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050311-6]
18. efcab2 ENSDARG00000074323 88 1.539 - - - - - - 0.801 - 0.738 EF-hand calcium binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-070521-5]
19. si:dkey-14a7.4 si:dkey-14a7.4 5 1.482 - - 0.734 - - - 0.748 - -
20. si:ch73-94f11.5 si:ch73-94f11.5 6 1.418 - - 0.711 - - - - - 0.707
21. CR848763.1 CR848763.1 9 1 - - - - - - 1.000 - -
22. gper gper 4 1 - - - - - - 1.000 - -
23. TRMT10B ENSDARG00000060176 13 1 - - - - - - 1.000 - - tRNA methyltransferase 10B [Source:ZFIN;Acc:ZDB-GENE-061013-313]
24. mespba ENSDARG00000030347, ENSDARG00000110553 1 1 - - - - - - 1.000 - - mesoderm posterior ba [Source:ZFIN;Acc:ZDB-GENE-000406-9]
25. ggh ENSDARG00000037176 9 1 - - - - - - 1.000 - - gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase) [Source:ZFIN;Acc:ZDB-GENE-040426-2615]
26. CABZ01028403.1 CABZ01028403.1 48 1 - - - - - - 1.000 - -
27. si:dkey-27p18.6 4 1 - - - - - - 1.000 - - si:dkey-27p18.6, transcript variant X1
28. si:ch73-95a24.1 si:ch73-95a24.1 11 1 - - - - - - 1.000 - -
29. si:ch211-113a14.29_1 4 1 - - 1.000 - - - - - - si:ch211-113a14.29
30. HTRA2_2 HTRA2_2 1 1 - - - - - - 1.000 - -
31. Metazoa_SRP_10 Metazoa_SRP_10 5 1 - - - - - - - - 1.000
32. si:dkeyp-104f11.9 ENSDARG00000096715 81 1 - - 1.000 - - - - - - si:dkeyp-104f11.9 [Source:ZFIN;Acc:ZDB-GENE-130603-41]
33. ENSDARG00000062524 ENSDARG00000062524 1 1 - - 1.000 - - - - - -
34. BX321870.1 ENSDARG00000098519 9 1 - - - - - - 1.000 - -
35. si:dkey-10c21.1 ENSDARG00000079133 32 1 - - - - - - - - 1.000 si:dkey-10c21.1 [Source:ZFIN;Acc:ZDB-GENE-081104-302]
36. rundc3b ENSDARG00000009961 10 1 - - - - - - 1.000 - - RUN domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-041114-121]
37. si:ch73-27e22.5 si:ch73-27e22.5 10 1 - - - - - - 1.000 - -
38. CR407588.1 ENSDARG00000115460 9 1 - - - - - - 1.000 - - SH3 and SYLF domain containing 1 [Source:NCBI gene;Acc:566522]
39. si:dkey-16j24.1 2 1 - - - - - - 1.000 - - si:dkey-16j24.1, transcript variant X1
40. si:dkey-102m7.3 ENSDARG00000100366 27 1 - - - - - - 1.000 - - si:dkey-102m7.3 [Source:ZFIN;Acc:ZDB-GENE-091204-389]
41. pla2g4a pla2g4a 7 1 - - - - - - 1.000 - -
42. si:dkey-277m11.2 ENSDARG00000094879 15 1 - - - - - - 1.000 - - si:dkey-277m11.2 [Source:ZFIN;Acc:ZDB-GENE-060526-285]
43. taar14j ENSDARG00000075828, ENSDARG00000112737 3 1 - - - - - - - - 1.000 trace amine associated receptor 14j [Source:ZFIN;Acc:ZDB-GENE-041014-34]
44. CU856520.1 ENSDARG00000098941 2 1 - - - - - - - - 1.000
45. U6_16 U6_16 1 1 - - - - - - - - 1.000
46. sftpba ENSDARG00000094708 2 1 - - - - - - 1.000 - - surfactant protein Ba [Source:ZFIN;Acc:ZDB-GENE-091204-378]
47. clrn1 ENSDARG00000102890 5 1 - - - - - - 1.000 - - clarin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-420]
48. mir30b 4 1 - - - - - - 1.000 - - microRNA 30b
49. si:dkey-3b8.4 si:dkey-3b8.4 13 1 - - - - - - 1.000 - -
50. si:ch211-287c22.3 si:ch211-287c22.3 1 1 - - - - - - 1.000 - -
51. ADAD1 ENSDARG00000089181 9 1 - - - - - - 1.000 - - adenosine deaminase domain containing 1 (testis-specific) [Source:ZFIN;Acc:ZDB-GENE-030131-6285]
52. mespab ENSDARG00000068761 1 1 - - - - - - - - 1.000 mesoderm posterior ab [Source:ZFIN;Acc:ZDB-GENE-090817-2]
53. si:dkey-208k22.1 si:dkey-208k22.1 1 1 - - 1.000 - - - - - -
54. zgc:175248 ENSDARG00000104153 1 1 - - - - - - 1.000 - - zgc:175248 [Source:ZFIN;Acc:ZDB-GENE-080204-93]
55. tlr8a ENSDARG00000090119 1 1 - - - - - - - - 1.000 toll-like receptor 8a [Source:ZFIN;Acc:ZDB-GENE-040219-13]
56. si:dkey-173l11.3 si:dkey-173l11.3 14 1 - - - - - - 1.000 - -
57. si:ch211-202m22.1 ENSDARG00000094491 24 1 - - - - - - 1.000 - - si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
58. F2RL3 ENSDARG00000079399 29 1 - - - - - - 1.000 - - F2R like thrombin or trypsin receptor 3 [Source:HGNC Symbol;Acc:HGNC:3540]
59. si:dkey-122c11.7 ENSDARG00000103721 3 1 - - - - - - 1.000 - - si:dkey-122c11.7 [Source:ZFIN;Acc:ZDB-GENE-110913-120]
60. MYO7B MYO7B 8 1 - - - - - - 1.000 - -
61. tlr2 ENSDARG00000037758, ENSDARG00000116961 15 1 - - - - - - 1.000 - - toll-like receptor 2 [Source:ZFIN;Acc:ZDB-GENE-040219-6]
62. C24H7orf10 C24H7orf10 7 1 - - - - - - - - 1.000
63. LRIT3 LRIT3 12 1 - - - - - - 1.000 - -
64. im:7138239 ENSDARG00000039070 3 1 - - - - - - 1.000 - - im:7138239 [Source:ZFIN;Acc:ZDB-GENE-081007-2]
65. si:dkeyp-66d7.4 si:dkeyp-66d7.4 2 1 - - 1.000 - - - - - -
66. fam213ab 1 1 - - - - - - 1.000 - - family with sequence similarity 213, member Ab
67. CR759907.3 CR759907.3 3 1 - - - - - - 1.000 - -
68. def8_1 ENSDARG00000068208 1 1 - - 1.000 - - - - - - differentially expressed in FDCP 8 homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-041114-96]
69. SNORD10 SNORD10 71 1 - - - - - - 1.000 - -
70. cyp46a4 cyp46a4 5 1 - - 1.000 - - - - - -
71. p2rx4b ENSDARG00000042452 14 1 - - - - - - 1.000 - - purinergic receptor P2X, ligand-gated ion channel, 4b [Source:ZFIN;Acc:ZDB-GENE-030319-4]
72. si:ch211-202a12.8 si:ch211-202a12.8 2 1 - - - - - - 1.000 - -
73. ENSDARG00000029805 ENSDARG00000029805 4 1 - - - - - - - - 1.000
74. CR855327.1 CR855327.1 6 1 - - - - - - 1.000 - -
75. zgc:66473 ENSDARG00000087289, ENSDARG00000087375 1 1 - - - - - - - - 1.000 zgc:66473 [Source:ZFIN;Acc:ZDB-GENE-030131-5708]
76. BX927369.5 BX927369.5 1 1 - - - - - - 1.000 - -
77. GOLT1A ENSDARG00000088933 14 1 - - 1.000 - - - - - - golgi transport 1A [Source:ZFIN;Acc:ZDB-GENE-141212-320]
78. si:dkey-25o1.4 si:dkey-25o1.4 1 1 - - - - - - 1.000 - -
79. rx3 ENSDARG00000052893 43 1 - - - - - - 1.000 - - retinal homeobox gene 3 [Source:ZFIN;Acc:ZDB-GENE-990415-238]
80. ZNF648 ENSDARG00000104823 194 1 - - - - - - 1.000 - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
81. wu:fe11b02_1 wu:fe11b02_1 7 1 - - - - - - 1.000 - -
82. BX321875.3 ENSDARG00000112569 24 1 - - - - - - 1.000 - -
83. si:ch211-254p10.2 ENSDARG00000056750 3 1 - - - - - - 1.000 - - si:ch211-254p10.2 [Source:ZFIN;Acc:ZDB-GENE-100922-17]
84. zgc:173619_1 2 1 - - - - - - 1.000 - - zgc:173619
85. si:ch211-67e16.10 si:ch211-67e16.10 2 1 - - - - - - 1.000 - -
86. slc5a12 ENSDARG00000005004 15 1 - - - - - - 1.000 - - solute carrier family 5 (sodium/monocarboxylate cotransporter), member 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1343]
87. NUGGC NUGGC 9 1 - - - - - - 1.000 - -
88. CR388416.3 CR388416.3 1 1 - - - - - - 1.000 - -
89. si:dkey-200l5.4 ENSDARG00000095294 13 1 - - - - - - - - 1.000 si:dkey-200l5.4 [Source:ZFIN;Acc:ZDB-GENE-091204-393]
90. c1qtnf5 ENSDARG00000056134 729 1 - - - - - - 1.000 - - C1q and TNF related 5 [Source:ZFIN;Acc:ZDB-GENE-050706-101]
91. si:ch73-138e16.6 ENSDARG00000101044 2 1 - - 1.000 - - - - - - si:ch73-138e16.6 [Source:ZFIN;Acc:ZDB-GENE-070705-205]
92. zgc:136902 zgc:136902 4 1 - - - - - - 1.000 - -
93. pvrl4 155 1 - - - - - - 1.000 - - poliovirus receptor-related 4
94. si:ch211-150o23.4 si:ch211-150o23.4 7 1 - - - - - - 1.000 - -
95. si:dkey-21e13.3 ENSDARG00000096701 8 1 - - - - - - 1.000 - - si:dkey-21e13.3 [Source:ZFIN;Acc:ZDB-GENE-130531-75]
96. CU570791.1 ENSDARG00000098597 4 1 - - - - - - 1.000 - - NACHT and WD repeat domain-containing protein 2-like [Source:NCBI gene;Acc:108179119]
97. ft2 ENSDARG00000109567 5 1 - - - - - - - - 1.000 alpha(1,3)fucosyltransferase gene 2 [Source:ZFIN;Acc:ZDB-GENE-990715-18]
98. chia.3 ENSDARG00000009612 14 1 - - 1.000 - - - - - - chitinase, acidic.3 [Source:ZFIN;Acc:ZDB-GENE-040426-2891]
99. zgc:66484 ENSDARG00000030478 167 1 - - - - - - 1.000 - - zgc:66484 [Source:ZFIN;Acc:ZDB-GENE-030131-5768]
100. cdca9 ENSDARG00000088639, ENSDARG00000113114 3 1 - - - - - - 1.000 - - cell division cycle associated 9 [Source:ZFIN;Acc:ZDB-GENE-090706-4]

There are 714 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA