Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-183d21.1

Gene Name Gene ID Reads Annotation
si:ch211-183d21.1 ENSDARG00000092499 1071 si:ch211-183d21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-8516]










Genes with expression patterns similar to si:ch211-183d21.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-183d21.1 ENSDARG00000092499 1071 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-183d21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-8516]
2. bcas2 ENSDARG00000043631 1971 2.303 - 0.718 - - - 0.835 0.750 - - BCAS2, pre-mRNA processing factor [Source:ZFIN;Acc:ZDB-GENE-030408-5]
3. matr3l1.1_1 ENSDARG00000000394, ENSDARG00000001162 1860 1.726 - 0.787 - - - 0.939 - - - matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
4. cobl_1 ENSDARG00000091006 293 1.721 - - - - - 0.948 0.773 - - cordon-bleu WH2 repeat protein [Source:ZFIN;Acc:ZDB-GENE-091020-11]
5. slc39a10 ENSDARG00000005823 2634 1.685 - - - - - 0.875 0.810 - - solute carrier family 39 (zinc transporter), member 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1157]
6. arhgap10 ENSDARG00000078326 994 1.685 - - - - - 0.899 0.786 - - Rho GTPase activating protein 10 [Source:ZFIN;Acc:ZDB-GENE-060512-221]
7. csnk1g2a ENSDARG00000005458 2917 1.678 - - - - - 0.924 - 0.754 - casein kinase 1, gamma 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6445]
8. PVRL4_1 PVRL4_1 702 1.675 - - - - - 0.838 - 0.837 -
9. CABZ01084815.1 CABZ01084815.1 351 1.664 - 0.718 - - - 0.946 - - -
10. mapk13 ENSDARG00000058470 1001 1.661 - - - - - 0.925 0.736 - - mitogen-activated protein kinase 13 [Source:ZFIN;Acc:ZDB-GENE-041111-17]
11. kcnj13 ENSDARG00000043443 700 1.647 - - - - - 0.890 0.757 - - potassium inwardly-rectifying channel, subfamily J, member 13 [Source:ZFIN;Acc:ZDB-GENE-070129-1]
12. fgfbp1 fgfbp1 445 1.643 - 0.730 - - - 0.913 - - -
13. tmem243b ENSDARG00000033179, ENSDARG00000114077, ENSDARG00000116817 1171 1.643 - - - - - 0.851 0.792 - - transmembrane protein 243, mitochondrial b [Source:ZFIN;Acc:ZDB-GENE-040426-2205]
14. cln6a ENSDARG00000077584 1090 1.643 - - - - - 0.904 0.739 - - CLN6, transmembrane ER protein a [Source:ZFIN;Acc:ZDB-GENE-041010-57]
15. pik3r2 ENSDARG00000018060, ENSDARG00000112255 3899 1.641 - - - - - 0.857 0.784 - - phosphoinositide-3-kinase, regulatory subunit 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040309-1]
16. ppap2b ppap2b 2900 1.634 - 0.784 - - - - 0.850 - -
17. rnf145b ENSDARG00000032373 601 1.62 - - - - - 0.798 0.822 - - ring finger protein 145b [Source:ZFIN;Acc:ZDB-GENE-030131-5264]
18. chtopa ENSDARG00000057234 3287 1.614 - 0.813 - - - 0.801 - - - chromatin target of PRMT1a [Source:ZFIN;Acc:ZDB-GENE-030131-210]
19. ccz1 ENSDARG00000056559, ENSDARG00000109877 2629 1.613 0.708 - - - - 0.905 - - - CCZ1 homolog, vacuolar protein trafficking and biogenesis associated [Source:ZFIN;Acc:ZDB-GENE-040426-698]
20. mrpl48 ENSDARG00000035167 1008 1.6 - 0.727 - - - 0.873 - - - mitochondrial ribosomal protein L48 [Source:ZFIN;Acc:ZDB-GENE-041008-125]
21. snap29 ENSDARG00000038518 1609 1.587 - - - - - 0.868 0.719 - - synaptosomal-associated protein 29 [Source:ZFIN;Acc:ZDB-GENE-041111-226]
22. mdm4 ENSDARG00000057513 1954 1.58 0.753 - - - - 0.827 - - - MDM4, p53 regulator [Source:ZFIN;Acc:ZDB-GENE-030131-6872]
23. tfpia ENSDARG00000034718 1257 1.562 - 0.739 - - - - - 0.823 - tissue factor pathway inhibitor a [Source:ZFIN;Acc:ZDB-GENE-030711-1]
24. efnb1 ENSDARG00000007723, ENSDARG00000116351 1595 1.554 - - - - - 0.845 0.709 - - ephrin-B1 [Source:ZFIN;Acc:ZDB-GENE-010618-2]
25. si:dkey-13i19.8 ENSDARG00000093058 4617 1.552 - 0.734 - - - 0.818 - - - si:dkey-13i19.8 [Source:ZFIN;Acc:ZDB-GENE-041210-156]
26. bckdk ENSDARG00000016904 3775 1.533 - - - - - 0.779 0.754 - - branched chain ketoacid dehydrogenase kinase [Source:ZFIN;Acc:ZDB-GENE-021204-1]
27. ptpn23a ENSDARG00000070124 1206 1.527 0.720 - - - - 0.807 - - - protein tyrosine phosphatase, non-receptor type 23, a [Source:ZFIN;Acc:ZDB-GENE-100921-24]
28. dnmt3ab ENSDARG00000015566 1206 1.524 - 0.736 - - - 0.788 - - - DNA (cytosine-5-)-methyltransferase 3 alpha b [Source:ZFIN;Acc:ZDB-GENE-050314-3]
29. ptrhd1 ENSDARG00000016122 2705 1.524 - 0.718 - - - 0.806 - - - peptidyl-tRNA hydrolase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081110-2]
30. phlda2 ENSDARG00000042874, ENSDARG00000114844 3876 1.513 - - - - - 0.775 0.738 - - pleckstrin homology-like domain, family A, member 2 [Source:ZFIN;Acc:ZDB-GENE-050522-73]
31. med6 ENSDARG00000034734 2711 1.485 - 0.739 - - - 0.746 - - - mediator complex subunit 6 [Source:ZFIN;Acc:ZDB-GENE-040625-61]
32. trpm7 ENSDARG00000036232 925 1.484 - - - - - 0.711 0.773 - - transient receptor potential cation channel, subfamily M, member 7 [Source:ZFIN;Acc:ZDB-GENE-021115-2]
33. hhipl1 ENSDARG00000062501 210 1.475 0.739 - - - - - 0.736 - - HHIP-like 1 [Source:ZFIN;Acc:ZDB-GENE-090306-3]
34. EEF1E1 ENSDARG00000071774 3806 1.472 - 0.704 - - - 0.768 - - - eukaryotic translation elongation factor 1 epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4949]
35. CT955984.1 ENSDARG00000113577 1482 1.468 - 0.735 - - - - 0.733 - -
36. DST ENSDARG00000101858 4395 1.466 - - - - - 0.729 - 0.737 - dystonin [Source:HGNC Symbol;Acc:HGNC:1090]
37. surf4 ENSDARG00000104647 4203 1.462 - 0.730 - - - 0.732 - - - surfeit gene 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1426]
38. myo6a ENSDARG00000044016 847 1.457 - - - - - 0.747 0.710 - - myosin VIa [Source:ZFIN;Acc:ZDB-GENE-040819-2]
39. vamp5 ENSDARG00000068262 2413 1.427 0.706 - - - - - 0.721 - - vesicle-associated membrane protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-4209]
40. gnl3l ENSDARG00000020595, ENSDARG00000109309 3582 0.987 - - - - - 0.987 - - - guanine nucleotide binding protein-like 3 (nucleolar)-like [Source:ZFIN;Acc:ZDB-GENE-040723-1]
41. smim8 ENSDARG00000071040 622 0.98 - - - - - 0.980 - - - small integral membrane protein 8 [Source:ZFIN;Acc:ZDB-GENE-050522-423]
42. selj 884 0.979 - - - - - 0.979 - - - selenoprotein J
43. samd11 ENSDARG00000077852 631 0.976 - - - - - 0.976 - - - sterile alpha motif domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-060428-2]
44. gtf2e2 ENSDARG00000012672, ENSDARG00000109689, ENSDARG00000115211 1677 0.976 - - - - - 0.976 - - - general transcription factor IIE, polypeptide 2, beta [Source:ZFIN;Acc:ZDB-GENE-030131-6794]
45. pip5k1aa ENSDARG00000100396 1644 0.975 - - - - - 0.975 - - - phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, a [Source:ZFIN;Acc:ZDB-GENE-050522-517]
46. MYOF ENSDARG00000006112 436 0.975 - - - - - 0.975 - - - myoferlin [Source:ZFIN;Acc:ZDB-GENE-040426-1138]
47. sc:d0139 sc:d0139 233 0.975 - - - - - 0.975 - - -
48. znf750 ENSDARG00000102267 327 0.975 - - - - - 0.975 - - - zinc finger protein 750 [Source:ZFIN;Acc:ZDB-GENE-050417-313]
49. traf2b ENSDARG00000101036 429 0.975 - - - - - 0.975 - - - Tnf receptor-associated factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5345]
50. PCSK6 ENSDARG00000104574 710 0.974 - - - - - 0.974 - - - proprotein convertase subtilisin/kexin type 6 [Source:ZFIN;Acc:ZDB-GENE-100908-1]
51. CU302436.3 CU302436.3 174 0.973 - - - - - 0.973 - - -
52. mesdc2 776 0.973 - - - - - 0.973 - - - mesoderm development candidate 2, transcript variant X2
53. RECQL4 ENSDARG00000077516 462 0.973 - - - - - 0.973 - - - RecQ helicase-like 4 [Source:ZFIN;Acc:ZDB-GENE-091112-2]
54. adam15 ENSDARG00000089213 359 0.973 - - - - - 0.973 - - - ADAM metallopeptidase domain 15 [Source:ZFIN;Acc:ZDB-GENE-070809-4]
55. ngly1 ENSDARG00000003205 733 0.972 - - - - - 0.972 - - - N-glycanase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-535]
56. tprg1 ENSDARG00000056026, ENSDARG00000115269 382 0.971 - - - - - 0.971 - - - tumor protein p63 regulated 1 [Source:ZFIN;Acc:ZDB-GENE-070410-113]
57. ccdc173 ENSDARG00000077928 260 0.971 - - - - - 0.971 - - - coiled-coil domain containing 173 [Source:ZFIN;Acc:ZDB-GENE-081104-457]
58. crybb3 ENSDARG00000041301 48 0.971 - - - - - 0.971 - - - crystallin, beta B3 [Source:ZFIN;Acc:ZDB-GENE-060130-2]
59. THEM6_1 ENSDARG00000103914 469 0.971 - - - - - 0.971 - - - thioesterase superfamily member 6 [Source:HGNC Symbol;Acc:HGNC:29656]
60. C13H4orf32 C13H4orf32 174 0.971 - - - - - 0.971 - - -
61. si:ch211-105d18.6 si:ch211-105d18.6 59 0.971 - - - - - 0.971 - - -
62. CABZ01072083.1 CABZ01072083.1 56 0.971 - - - - - 0.971 - - -
63. tmem192 ENSDARG00000037484, ENSDARG00000116740 269 0.97 - - - - - 0.970 - - - transmembrane protein 192 [Source:ZFIN;Acc:ZDB-GENE-040426-2254]
64. rwdd ENSDARG00000068256 964 0.97 - - - - - 0.970 - - - RWD domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041010-61]
65. sema6d ENSDARG00000002748 133 0.97 - - - - - 0.970 - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D [Source:ZFIN;Acc:ZDB-GENE-040426-1933]
66. si:dkey-27i16.3 si:dkey-27i16.3 494 0.97 - - - - - 0.970 - - -
67. pcgf5b ENSDARG00000052388 163 0.97 - - - - - 0.970 - - - polycomb group ring finger 5b [Source:ZFIN;Acc:ZDB-GENE-060512-34]
68. psmg2 ENSDARG00000035987 1938 0.97 - - - - - 0.970 - - - proteasome (prosome, macropain) assembly chaperone 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1972]
69. CU929417.2 CU929417.2 94 0.97 - - - - - 0.970 - - -
70. MSL1 MSL1 223 0.97 - - - - - 0.970 - - -
71. ube2j1 ENSDARG00000033489 497 0.969 - - - - - 0.969 - - - ubiquitin-conjugating enzyme E2, J1 [Source:ZFIN;Acc:ZDB-GENE-040426-2853]
72. tph2 ENSDARG00000057239, ENSDARG00000109777 55 0.969 - - - - - 0.969 - - - tryptophan hydroxylase 2 (tryptophan 5-monooxygenase) [Source:ZFIN;Acc:ZDB-GENE-040624-4]
73. GDPD2 ENSDARG00000073870 229 0.969 - - - - - 0.969 - - - glycerophosphodiester phosphodiesterase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-081107-62]
74. CU929328.1 ENSDARG00000105332 31 0.969 - - - - - 0.969 - - -
75. nus1 ENSDARG00000027813 1417 0.969 - - - - - 0.969 - - - NUS1, dehydrodolichyl diphosphate synthase subunit [Source:ZFIN;Acc:ZDB-GENE-040718-48]
76. rhoab ENSDARG00000094673 26 0.969 - - - - - 0.969 - - - ras homolog gene family, member Ab [Source:ZFIN;Acc:ZDB-GENE-040322-2]
77. zbtb46 ENSDARG00000078191, ENSDARG00000113888 231 0.969 - - - - - 0.969 - - - zinc finger and BTB domain containing 46 [Source:ZFIN;Acc:ZDB-GENE-090313-352]
78. CIR1 ENSDARG00000099733 66 0.968 - - - - - 0.968 - - - corepressor interacting with RBPJ, 1 [Source:HGNC Symbol;Acc:HGNC:24217]
79. TDRD15 TDRD15 46 0.968 - - - - - 0.968 - - -
80. ankrd39 ENSDARG00000041350 73 0.968 - - - - - 0.968 - - - ankyrin repeat domain 39 [Source:ZFIN;Acc:ZDB-GENE-081104-153]
81. bace2 ENSDARG00000044781 17 0.968 - - - - - 0.968 - - - beta-secretase 2 [Source:ZFIN;Acc:ZDB-GENE-041010-68]
82. CDK5RAP2 CDK5RAP2 636 0.968 - - - - - 0.968 - - -
83. inhbab ENSDARG00000024759 29 0.968 - - - - - 0.968 - - - inhibin subunit beta Ab [Source:ZFIN;Acc:ZDB-GENE-050525-2]
84. CR759816.1 ENSDARG00000098977 27 0.968 - - - - - 0.968 - - -
85. slc6a19b ENSDARG00000056719 140 0.968 - - - - - 0.968 - - - solute carrier family 6 (neutral amino acid transporter), member 19b [Source:ZFIN;Acc:ZDB-GENE-030131-4755]
86. sh3d19_1 ENSDARG00000088202, ENSDARG00000114126, ENSDARG00000117115 90 0.968 - - - - - 0.968 - - - SH3 domain containing 19 [Source:ZFIN;Acc:ZDB-GENE-050522-481]
87. hig1 hig1 2493 0.968 - - - - - 0.968 - - -
88. si:dkey-57h18.2 33 0.968 - - - - - 0.968 - - - si:dkey-57h18.2, transcript variant X1
89. CCDC64B CCDC64B 337 0.968 - - - - - 0.968 - - -
90. slc9a6a ENSDARG00000009209, ENSDARG00000111329 184 0.968 - - - - - 0.968 - - - solute carrier family 9, subfamily A (NHE6, cation proton antiporter 6), member 6a [Source:ZFIN;Acc:ZDB-GENE-070424-104]
91. si:dkey-115f9.2 si:dkey-115f9.2 18 0.968 - - - - - 0.968 - - -
92. slc12a9 ENSDARG00000060366 293 0.967 - - - - - 0.967 - - - solute carrier family 12, member 9 [Source:ZFIN;Acc:ZDB-GENE-050208-222]
93. si:zfos-364h11.1 99 0.967 - - - - - 0.967 - - - si:zfos-364h11.1, transcript variant X4
94. tmem53 ENSDARG00000038789 411 0.967 - - - - - 0.967 - - - transmembrane protein 53 [Source:ZFIN;Acc:ZDB-GENE-040718-384]
95. ik ENSDARG00000004161 3132 0.967 - - - - - 0.967 - - - IK cytokine [Source:ZFIN;Acc:ZDB-GENE-030131-960]
96. zgc:110286 92 0.967 - - - - - 0.967 - - - zgc:110286
97. FP017169.3 FP017169.3 216 0.967 - - - - - 0.967 - - -
98. egr3 ENSDARG00000089156 71 0.967 - - - - - 0.967 - - - early growth response 3 [Source:ZFIN;Acc:ZDB-GENE-040718-394]
99. fosb ENSDARG00000055751 170 0.966 - - - - - 0.966 - - - FBJ murine osteosarcoma viral oncogene homolog B [Source:ZFIN;Acc:ZDB-GENE-041114-181]
100. dhrs13a.2 ENSDARG00000111240 491 0.966 - - - - - 0.966 - - - dehydrogenase/reductase (SDR family) member 13a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040912-69]

There are 1224 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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