Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-179l5.5

Gene Name Gene ID Reads Annotation
si:ch211-179l5.5 si:ch211-179l5.5 249










Genes with expression patterns similar to si:ch211-179l5.5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-179l5.5 si:ch211-179l5.5 249 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. FAM3D ENSDARG00000091625 1392 1.67 - - - - - 0.791 0.879 - - family with sequence similarity 3 member D [Source:HGNC Symbol;Acc:HGNC:18665]
3. tgm5l ENSDARG00000098837 174 1.636 - - - - - 0.790 0.846 - - transglutaminase 5, like [Source:ZFIN;Acc:ZDB-GENE-110411-176]
4. alox5 alox5 406 1.615 - - - - - 0.733 0.882 - -
5. plekhf2 ENSDARG00000021141 529 1.607 - - - - - 0.743 0.864 - - pleckstrin homology domain containing, family F (with FYVE domain) member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-884]
6. dnase1l3 dnase1l3 455 1.589 0.732 - - - - 0.857 - - -
7. rad18 ENSDARG00000027938 574 1.588 - - - - - 0.750 0.838 - - RAD18 E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-745]
8. mlec ENSDARG00000059630 2057 1.584 - - - - - 0.712 0.872 - - malectin [Source:ZFIN;Acc:ZDB-GENE-081105-187]
9. casp7 ENSDARG00000091836 657 1.584 - - - - - 0.735 0.849 - - caspase 7, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-050522-506]
10. scamp4 ENSDARG00000010531, ENSDARG00000114792 1143 1.57 0.741 - - - - - 0.829 - - secretory carrier membrane protein 4 [Source:ZFIN;Acc:ZDB-GENE-050913-40]
11. GK2 GK2 813 1.569 0.829 0.740 - - - - - - -
12. epcam ENSDARG00000040534, ENSDARG00000110073 3322 1.563 - - - - - 0.754 0.809 - - epithelial cell adhesion molecule [Source:ZFIN;Acc:ZDB-GENE-040426-2209]
13. kctd2 ENSDARG00000025875, ENSDARG00000114216 802 1.562 - 0.747 - - - - 0.815 - - potassium channel tetramerization domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060825-85]
14. ENGASE ENSDARG00000010035 232 1.547 - 0.737 - - - - 0.810 - - endo-beta-N-acetylglucosaminidase [Source:ZFIN;Acc:ZDB-GENE-070112-1332]
15. mpzl2b ENSDARG00000027345, ENSDARG00000113465 575 1.533 - - - - 0.763 - 0.770 - - myelin protein zero-like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8774]
16. trim25l ENSDARG00000020863 292 1.523 - - - - - 0.788 0.735 - - tripartite motif containing 25, like [Source:ZFIN;Acc:ZDB-GENE-040914-87]
17. C21H5orf15 C21H5orf15 2318 1.511 0.736 - - - - - 0.775 - -
18. rpp40 ENSDARG00000017605 63 1.497 - - - - - 0.752 0.745 - - ribonuclease P/MRP 40 subunit [Source:ZFIN;Acc:ZDB-GENE-040625-161]
19. nr1d2a ENSDARG00000003820 452 1.492 - 0.700 - - - 0.792 - - - nuclear receptor subfamily 1, group D, member 2a [Source:ZFIN;Acc:ZDB-GENE-040504-1]
20. cd2ap ENSDARG00000015224 2830 1.49 - - - - - 0.709 0.781 - - CD2-associated protein [Source:ZFIN;Acc:ZDB-GENE-030131-8078]
21. soga1 ENSDARG00000063075 1066 1.474 0.752 - - - - 0.722 - - - suppressor of glucose, autophagy associated 1 [Source:ZFIN;Acc:ZDB-GENE-090313-188]
22. fbxo42 ENSDARG00000087545 262 1.469 - - - - - 0.726 0.743 - - F-box protein 42 [Source:ZFIN;Acc:ZDB-GENE-030131-7399]
23. si:ch211-284o19.8 ENSDARG00000053836 43 1.449 - - - - - 0.718 0.731 - - si:ch211-284o19.8 [Source:ZFIN;Acc:ZDB-GENE-070912-289]
24. si:ch211-219f7.3 si:ch211-219f7.3 48 1.438 - - - - - 0.712 0.726 - -
25. tlr7 ENSDARG00000068812, ENSDARG00000075685 30 1.429 - - - - - 0.710 0.719 - - toll-like receptor 7 [Source:ZFIN;Acc:ZDB-GENE-040219-11]
26. MALSU1 MALSU1 1251 1.426 - 0.704 - - - - 0.722 - -
27. RMDN1 ENSDARG00000074507 697 1.426 - 0.702 - - - - 0.724 - - regulator of microtubule dynamics 1 [Source:ZFIN;Acc:ZDB-GENE-070928-17]
28. spsb3a ENSDARG00000077737 527 1.422 - 0.703 - - - - 0.719 - - splA/ryanodine receptor domain and SOCS box containing 3a [Source:ZFIN;Acc:ZDB-GENE-030131-4182]
29. plbd1 ENSDARG00000063313 2842 1.417 - - - - - 0.704 0.713 - - phospholipase B domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050411-22]
30. senp3b ENSDARG00000056741 1296 1.402 - 0.700 - - 0.702 - - - - SUMO specific peptidase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-6714]
31. bty bty 752 0.947 - - - - - - 0.947 - -
32. CABZ01049802.1 CABZ01049802.1 195 0.946 - - - - - - 0.946 - -
33. CABZ01054962.1 CABZ01054962.1 91 0.94 - - - - - - 0.940 - -
34. hnf1a ENSDARG00000009470 60 0.94 0.940 - - - - - - - - HNF1 homeobox a [Source:ZFIN;Acc:ZDB-GENE-021206-12]
35. mylipb ENSDARG00000055118 144 0.932 0.932 - - - - - - - - myosin regulatory light chain interacting protein b [Source:ZFIN;Acc:ZDB-GENE-061027-67]
36. pon3 pon3 1146 0.93 - - - - - - 0.930 - -
37. MGST1 MGST1 1958 0.929 - - - - - - 0.929 - -
38. arrdc1a ENSDARG00000068148 511 0.915 - - - - - 0.915 - - - arrestin domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030925-15]
39. ca15a ENSDARG00000015654 2657 0.906 - - - - - 0.906 - - - carbonic anhydrase XVa [Source:ZFIN;Acc:ZDB-GENE-070424-7]
40. zgc:101663 ENSDARG00000037852 830 0.904 - - - - - 0.904 - - - zgc:101663 [Source:ZFIN;Acc:ZDB-GENE-041114-149]
41. ZNRF4 ZNRF4 16 0.898 0.898 - - - - - - - -
42. slc6a17 ENSDARG00000068787, ENSDARG00000109560 413 0.897 - - - - - - 0.897 - - solute carrier family 6 (neutral amino acid transporter), member 17 [Source:ZFIN;Acc:ZDB-GENE-030131-8187]
43. GALNT3 ENSDARG00000108649 356 0.897 - - - - - - 0.897 - - polypeptide N-acetylgalactosaminyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:4125]
44. abhd4 ENSDARG00000102887 748 0.895 - - - - - - 0.895 - - abhydrolase domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-050417-83]
45. kazald2 ENSDARG00000078518 3062 0.893 0.893 - - - - - - - - Kazal-type serine peptidase inhibitor domain 2 [Source:ZFIN;Acc:ZDB-GENE-070928-14]
46. cx30.3 ENSDARG00000042707, ENSDARG00000116331 2399 0.889 - - - - - - 0.889 - - connexin 30.3 [Source:ZFIN;Acc:ZDB-GENE-040406-1]
47. ptgs2a ENSDARG00000004539 1207 0.888 - - - - - - 0.888 - - prostaglandin-endoperoxide synthase 2a [Source:ZFIN;Acc:ZDB-GENE-020530-2]
48. serpinb1l3 ENSDARG00000014556 378 0.883 - - - - - - 0.883 - - serpin peptidase inhibitor, clade B (ovalbumin), member 1, like 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7059]
49. paf1 ENSDARG00000098432 1806 0.881 - - - - - - 0.881 - - PAF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-050506-101]
50. CT027762.3_1 CT027762.3_1 62 0.881 - - - - - - 0.881 - -
51. clcn5 clcn5 492 0.879 0.879 - - - - - - - -
52. tada2a ENSDARG00000031562, ENSDARG00000115183 610 0.878 - 0.878 - - - - - - - transcriptional adaptor 2A [Source:ZFIN;Acc:ZDB-GENE-060929-508]
53. snx15 ENSDARG00000020397, ENSDARG00000110059 491 0.877 - - - - - 0.877 - - - sorting nexin 15 [Source:ZFIN;Acc:ZDB-GENE-040426-1377]
54. bnipl ENSDARG00000060435 1382 0.877 - - - - - - 0.877 - - BCL2 interacting protein like [Source:ZFIN;Acc:ZDB-GENE-060503-81]
55. gne ENSDARG00000099771 617 0.875 - 0.875 - - - - - - - glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase [Source:ZFIN;Acc:ZDB-GENE-040426-1848]
56. ERO1LB ERO1LB 1433 0.874 - - - - - 0.874 - - -
57. vcana ENSDARG00000103515 611 0.874 - - - - - - 0.874 - - versican a [Source:ZFIN;Acc:ZDB-GENE-011023-1]
58. tulp4 tulp4 1520 0.873 - 0.873 - - - - - - -
59. CCDC61 ENSDARG00000062307 582 0.872 - 0.872 - - - - - - - coiled-coil domain containing 61 [Source:ZFIN;Acc:ZDB-GENE-060929-348]
60. supt6h ENSDARG00000006524 3221 0.872 - 0.872 - - - - - - - SPT6 homolog, histone chaperone [Source:ZFIN;Acc:ZDB-GENE-030131-7949]
61. ssr3_1 ENSDARG00000014165, ENSDARG00000111483 5702 0.871 - - - - - - 0.871 - - signal sequence receptor, gamma [Source:ZFIN;Acc:ZDB-GENE-030131-9134]
62. CREB3L4 1085 0.87 - - - - - 0.870 - - - cAMP responsive element binding protein 3-like 4
63. kctd16b ENSDARG00000020102 83 0.869 0.869 - - - - - - - - potassium channel tetramerization domain containing 16b [Source:ZFIN;Acc:ZDB-GENE-060117-2]
64. CU929378.1 CU929378.1 514 0.869 0.869 - - - - - - - -
65. cybb ENSDARG00000056615 177 0.868 - - - - - - 0.868 - - cytochrome b-245, beta polypeptide (chronic granulomatous disease) [Source:ZFIN;Acc:ZDB-GENE-040426-1380]
66. EMILIN2 EMILIN2 429 0.868 - - - - - - 0.868 - -
67. LRG1 LRG1 304 0.868 - - - - - - 0.868 - -
68. nrp2a_1 ENSDARG00000096546 3358 0.867 - - - - - 0.867 - - - neuropilin 2a [Source:ZFIN;Acc:ZDB-GENE-040611-2]
69. zgc:109868 zgc:109868 7474 0.866 - - - - - - 0.866 - -
70. capn2b ENSDARG00000055592 5431 0.865 - - - - - - 0.865 - - calpain 2, (m/II) large subunit b [Source:ZFIN;Acc:ZDB-GENE-050522-84]
71. stx16 ENSDARG00000003307, ENSDARG00000112974 487 0.863 0.863 - - - - - - - - syntaxin 16 [Source:ZFIN;Acc:ZDB-GENE-060810-113]
72. tmem205 ENSDARG00000100677 101 0.863 - - - - - - 0.863 - - transmembrane protein 205 [Source:ZFIN;Acc:ZDB-GENE-070112-1692]
73. lrig2 ENSDARG00000078561, ENSDARG00000116750 2559 0.862 - - - - - - 0.862 - - leucine-rich repeats and immunoglobulin-like domains 2 [Source:ZFIN;Acc:ZDB-GENE-041111-75]
74. mmp9 ENSDARG00000042816 298 0.862 - - - - - 0.862 - - - matrix metallopeptidase 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2132]
75. chrac1 ENSDARG00000042337 2590 0.86 - - - - - - 0.860 - - chromatin accessibility complex 1 [Source:ZFIN;Acc:ZDB-GENE-050227-18]
76. tmem127 ENSDARG00000030981 1389 0.86 - - - - - - 0.860 - - transmembrane protein 127 [Source:ZFIN;Acc:ZDB-GENE-050522-97]
77. AL929434.1 AL929434.1 3294 0.86 - - - - - - 0.860 - -
78. adob ENSDARG00000053571 846 0.859 - - - - - 0.859 - - - 2-aminoethanethiol (cysteamine) dioxygenase b [Source:ZFIN;Acc:ZDB-GENE-040426-2267]
79. CLCC1 155 0.857 - - - - - - 0.857 - - chloride channel CLIC-like 1, transcript variant X2
80. polr1d ENSDARG00000037570 860 0.857 - 0.857 - - - - - - - RNA polymerase I and III subunit D [Source:ZFIN;Acc:ZDB-GENE-040930-4]
81. snx17 ENSDARG00000091418 781 0.855 0.855 - - - - - - - - sorting nexin 17 [Source:ZFIN;Acc:ZDB-GENE-030131-9475]
82. SHROOM3 ENSDARG00000102180 419 0.854 0.854 - - - - - - - - shroom family member 3 [Source:ZFIN;Acc:ZDB-GENE-120817-1]
83. hopx ENSDARG00000089368 2342 0.854 - - - - - - 0.854 - - HOP homeobox [Source:ZFIN;Acc:ZDB-GENE-031016-2]
84. zdhhc5a ENSDARG00000016263 625 0.854 0.854 - - - - - - - - zinc finger, DHHC-type containing 5a [Source:ZFIN;Acc:ZDB-GENE-090312-92]
85. acot11b ENSDARG00000042122 235 0.854 - - - - - 0.854 - - - acyl-CoA thioesterase 11b [Source:ZFIN;Acc:ZDB-GENE-051127-37]
86. DMXL1 DMXL1 798 0.854 - - - - - 0.854 - - -
87. pparaa ENSDARG00000031777 216 0.853 - - - - - 0.853 - - - peroxisome proliferator-activated receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-041210-169]
88. cyp2aa3 ENSDARG00000103347 880 0.853 - - - - - 0.853 - - - cytochrome P450, family 2, subfamily AA, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-031030-8]
89. cetp ENSDARG00000030872 611 0.853 - - - - - 0.853 - - - cholesteryl ester transfer protein, plasma [Source:ZFIN;Acc:ZDB-GENE-041114-54]
90. samd13 ENSDARG00000062977 331 0.852 - - - - - - 0.852 - - sterile alpha motif domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-060929-676]
91. gnb1a ENSDARG00000090454 481 0.852 - - - - - - 0.852 - - guanine nucleotide binding protein (G protein), beta polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-030131-823]
92. TMC6 TMC6 773 0.852 - - - - - - 0.852 - -
93. srpr 5148 0.852 - - - - - - 0.852 - - signal recognition particle receptor (docking protein)
94. ENSDARG00000089986 ENSDARG00000089986 308 0.852 - - - - - - 0.852 - -
95. b4galt7 ENSDARG00000021899 546 0.851 - 0.851 - - - - - - - xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I) [Source:ZFIN;Acc:ZDB-GENE-040727-3]
96. si:ch211-233a24.2 ENSDARG00000062330, ENSDARG00000110766, ENSDARG00000116929 622 0.851 - - - - - - 0.851 - - si:ch211-233a24.2 [Source:ZFIN;Acc:ZDB-GENE-090313-98]
97. carhsp1 ENSDARG00000053129 2100 0.85 - - - - - - 0.850 - - calcium regulated heat stable protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1479]
98. LRRC8E LRRC8E 495 0.848 - - - - - - 0.848 - -
99. sphk2 ENSDARG00000069893 1518 0.848 - - - - - 0.848 - - - sphingosine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-100922-225]
100. mdn1 ENSDARG00000008976 1403 0.848 - 0.848 - - - - - - - midasin AAA ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-041001-138]

There are 1067 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA