Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-179l5.4

Gene Name Gene ID Reads Annotation
si:ch211-179l5.4 si:ch211-179l5.4 3










Genes with expression patterns similar to si:ch211-179l5.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-179l5.4 si:ch211-179l5.4 3 1 - - 1.000 - - - - - -
2. si:ch211-173b9.5 si:ch211-173b9.5 2 1 - - 1.000 - - - - - -
3. igfbp6a ENSDARG00000070941 9 1 - - 1.000 - - - - - - insulin-like growth factor binding protein 6a [Source:ZFIN;Acc:ZDB-GENE-090521-1]
4. si:ch211-204a13.1 si:ch211-204a13.1 6 1 - - 1.000 - - - - - -
5. kcnd2 ENSDARG00000032799 1 1 - - 1.000 - - - - - - potassium voltage-gated channel, Shal-related subfamily, member 2 [Source:ZFIN;Acc:ZDB-GENE-041210-70]
6. XCR1 XCR1 9 1 - - 1.000 - - - - - -
7. CU207301.2 ENSDARG00000097677 2 1 - - 1.000 - - - - - -
8. ENSDARG00000089100 ENSDARG00000089100 5 1 - - 1.000 - - - - - -
9. antxr1a ENSDARG00000025672 32 1 - - 1.000 - - - - - - ANTXR cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-110411-15]
10. gbgt1l1 ENSDARG00000025275 21 1 - - 1.000 - - - - - - globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1117]
11. rhoga ENSDARG00000068653 13 1 - - 1.000 - - - - - - ras homolog family member Ga [Source:ZFIN;Acc:ZDB-GENE-060503-820]
12. si:dkey-26i13.6 ENSDARG00000092200 3 1 - - 1.000 - - - - - - si:dkey-26i13.6 [Source:ZFIN;Acc:ZDB-GENE-090312-165]
13. ifnphi1 ENSDARG00000025607 6 1 - - 1.000 - - - - - - interferon phi 1 [Source:ZFIN;Acc:ZDB-GENE-030721-3]
14. ighm ighm 6 0.999 - - 0.999 - - - - - -
15. CABZ01002345.1 CABZ01002345.1 3 0.996 - - 0.996 - - - - - -
16. zgc:198241 ENSDARG00000076483, ENSDARG00000116081 3 0.99 - - 0.990 - - - - - - zgc:198241 [Source:ZFIN;Acc:ZDB-GENE-080303-14]
17. tsen54 ENSDARG00000036844 11 0.987 - - 0.987 - - - - - - TSEN54 tRNA splicing endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-050522-454]
18. si:ch211-279l9.7 si:ch211-279l9.7 3 0.985 - - 0.985 - - - - - -
19. zgc:162144 ENSDARG00000037603, ENSDARG00000109982 11 0.981 - - 0.981 - - - - - - zgc:162144 [Source:ZFIN;Acc:ZDB-GENE-030131-7630]
20. bmp15 ENSDARG00000037491 16 0.981 - - 0.981 - - - - - - bone morphogenetic protein 15 [Source:ZFIN;Acc:ZDB-GENE-030131-6115]
21. ms4a17a.4 ENSDARG00000014024 36 0.978 - - 0.978 - - - - - - membrane-spanning 4-domains, subfamily A, member 17A.4 [Source:ZFIN;Acc:ZDB-GENE-070822-16]
22. LRFN2_1 LRFN2_1 17 0.974 - - 0.974 - - - - - -
23. art4 ENSDARG00000078178 44 0.972 - - 0.972 - - - - - - ADP-ribosyltransferase 4 (Dombrock blood group) [Source:ZFIN;Acc:ZDB-GENE-070725-5]
24. foxa ENSDARG00000087094, ENSDARG00000110743, ENSDARG00000115019 6 0.972 - - 0.972 - - - - - - forkhead box A sequence [Source:ZFIN;Acc:ZDB-GENE-990415-76]
25. CDH16 ENSDARG00000077570 78 0.968 - - 0.968 - - - - - - cadherin 16, KSP-cadherin [Source:ZFIN;Acc:ZDB-GENE-140106-140]
26. WIPF1 WIPF1 32 0.963 - - 0.963 - - - - - -
27. calml4a ENSDARG00000075800 14 0.961 - - 0.961 - - - - - - calmodulin-like 4a [Source:ZFIN;Acc:ZDB-GENE-081022-9]
28. si:ch211-179l5.6 si:ch211-179l5.6 33 0.953 - - 0.953 - - - - - -
29. FAM200A FAM200A 19 0.936 - - 0.936 - - - - - -
30. TNIP2 ENSDARG00000074501 35 0.935 - - 0.935 - - - - - - TNFAIP3 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-120913-2]
31. eif4e1b ENSDARG00000014565 12 0.928 - - 0.928 - - - - - - eukaryotic translation initiation factor 4E family member 1B [Source:ZFIN;Acc:ZDB-GENE-980526-127]
32. zgc:171759_3 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 2 0.926 - - 0.926 - - - - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
33. ncf2 ENSDARG00000005821 28 0.922 - - 0.922 - - - - - - neutrophil cytosolic factor 2 [Source:ZFIN;Acc:ZDB-GENE-070209-29]
34. casp3b ENSDARG00000055045 54 0.919 - - 0.919 - - - - - - caspase 3, apoptosis-related cysteine peptidase b [Source:ZFIN;Acc:ZDB-GENE-070607-1]
35. si:ch73-103b2.1 ENSDARG00000095944, ENSDARG00000099867 40 0.917 - - 0.917 - - - - - - si:ch73-103b2.1 [Source:ZFIN;Acc:ZDB-GENE-110408-42]
36. gtf3ab ENSDARG00000071583, ENSDARG00000116242 58 0.911 - - 0.911 - - - - - - general transcription factor IIIA, b [Source:ZFIN;Acc:ZDB-GENE-030131-7698]
37. LETMD1 ENSDARG00000030641, ENSDARG00000110586 13 0.91 - - 0.910 - - - - - - LETM1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-080723-8]
38. lrtomt lrtomt 39 0.909 - - 0.909 - - - - - -
39. si:dkeyp-51b9.3 ENSDARG00000092379 1374 0.901 - - 0.901 - - - - - - si:dkeyp-51b9.3 [Source:ZFIN;Acc:ZDB-GENE-081104-469]
40. CU138503.3 CU138503.3 31 0.901 - - 0.901 - - - - - -
41. CABZ01038313.1 CABZ01038313.1 79 0.896 - - 0.896 - - - - - -
42. ENSDARG00000091382 ENSDARG00000091382 4 0.893 - - 0.893 - - - - - -
43. zgc:113176 ENSDARG00000040487 30 0.884 - - 0.884 - - - - - - zgc:113176 [Source:ZFIN;Acc:ZDB-GENE-050327-60]
44. RDM1 RDM1 28 0.881 - - 0.881 - - - - - -
45. cldn17 ENSDARG00000099950 14 0.87 - - 0.870 - - - - - - claudin 17 [Source:ZFIN;Acc:ZDB-GENE-070821-2]
46. zgc:171779 ENSDARG00000016908 26 0.858 - - 0.858 - - - - - - zgc:171779 [Source:ZFIN;Acc:ZDB-GENE-071004-38]
47. HELZ2_1 ENSDARG00000012600 53 0.858 - - 0.858 - - - - - - helicase with zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:30021]
48. ddhd1b ENSDARG00000037042, ENSDARG00000111543, ENSDARG00000113512 12 0.849 - - 0.849 - - - - - - DDHD domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040724-18]
49. gpr112b gpr112b 28 0.845 - - 0.845 - - - - - -
50. acy3.1 ENSDARG00000093003 54 0.845 - - 0.845 - - - - - - aspartoacylase (aminocyclase) 3, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040718-345]
51. TMEM116 TMEM116 96 0.843 - - 0.843 - - - - - -
52. MDFI ENSDARG00000089564 8 0.837 - - 0.837 - - - - - - MyoD family inhibitor [Source:HGNC Symbol;Acc:HGNC:6967]
53. TRAPPC9 ENSDARG00000099118 26 0.828 - - 0.828 - - - - - - trafficking protein particle complex 9 [Source:HGNC Symbol;Acc:HGNC:30832]
54. IL17RA_1 IL17RA_1 39 0.818 - - 0.818 - - - - - -
55. rcn2 ENSDARG00000039378, ENSDARG00000110051, ENSDARG00000113764 61 0.798 - - 0.798 - - - - - - reticulocalbin 2 [Source:ZFIN;Acc:ZDB-GENE-050706-62]
56. si:dkey-97l20.5 si:dkey-97l20.5 33 0.791 - - 0.791 - - - - - -
57. si:ch211-73m21.1 ENSDARG00000096491 10 0.788 - - 0.788 - - - - - - si:ch211-73m21.1 [Source:ZFIN;Acc:ZDB-GENE-120709-61]
58. ankmy2a ENSDARG00000005948 141 0.775 - - 0.775 - - - - - - ankyrin repeat and MYND domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6321]
59. DLK1 60 0.774 - - 0.774 - - - - - - delta like non-canonical Notch ligand 1
60. klc4 ENSDARG00000086985 4 0.774 - - 0.774 - - - - - - kinesin light chain 4 [Source:ZFIN;Acc:ZDB-GENE-050417-350]
61. papd4_1 6 0.762 - - 0.762 - - - - - - PAP associated domain containing 4, transcript variant X1
62. CABZ01055343.1 CABZ01055343.1 12 0.761 - - 0.761 - - - - - -
63. cog1 ENSDARG00000105131 35 0.757 - - 0.757 - - - - - - component of oligomeric golgi complex 1 [Source:ZFIN;Acc:ZDB-GENE-050302-128]
64. si:ch211-147h1.4 ENSDARG00000045157 8 0.754 - - 0.754 - - - - - - si:ch211-147h1.4 [Source:ZFIN;Acc:ZDB-GENE-040724-228]
65. zgc:158417 ENSDARG00000101671 46 0.753 - - 0.753 - - - - - - zgc:158417 [Source:ZFIN;Acc:ZDB-GENE-061201-36]
66. si:dkeyp-35e5.10 ENSDARG00000107425 8 0.749 - - 0.749 - - - - - - si:dkeyp-35e5.10 [Source:ZFIN;Acc:ZDB-GENE-110913-63]
67. cbln2b ENSDARG00000077151 38 0.742 - - 0.742 - - - - - - cerebellin 2b precursor [Source:ZFIN;Acc:ZDB-GENE-070615-12]
68. s100b ENSDARG00000057598 41 0.739 - - 0.739 - - - - - - S100 calcium binding protein, beta (neural) [Source:ZFIN;Acc:ZDB-GENE-040718-290]
69. BRSK2 BRSK2 66 0.736 - - 0.736 - - - - - -
70. brpf3 brpf3 15 0.735 - - 0.735 - - - - - -
71. C3H19orf66 C3H19orf66 20 0.73 - - 0.730 - - - - - -
72. CCDC120 ENSDARG00000032856, ENSDARG00000114382 30 0.716 - - 0.716 - - - - - - coiled-coil domain containing 120 [Source:ZFIN;Acc:ZDB-GENE-061027-93]
73. plxdc1 ENSDARG00000078417 41 0.713 - - 0.713 - - - - - - plexin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081104-391]
74. slc12a3 ENSDARG00000013855 990 0.71 - - 0.710 - - - - - - solute carrier family 12 (sodium/chloride transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9505]
75. ZNF835 ZNF835 6 0.708 - - 0.708 - - - - - -
76. dgat1a ENSDARG00000103503 63 0.707 - - 0.707 - - - - - - diacylglycerol O-acyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4600]
77. si:dkeyp-35e5.11 si:dkeyp-35e5.11 38 0.705 - - 0.705 - - - - - -
78. ms4a17a.2 ENSDARG00000105674 32 0.702 - - 0.702 - - - - - - membrane-spanning 4-domains, subfamily A, member 17a.2 [Source:ZFIN;Acc:ZDB-GENE-070705-367]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA