Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-178j18.2

Gene Name Gene ID Reads Annotation
si:ch211-178j18.2 si:ch211-178j18.2 1










Genes with expression patterns similar to si:ch211-178j18.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-178j18.2 si:ch211-178j18.2 1 3 - 1.000 1.000 - - - - - 1.000
2. si:dkey-16j24.1 2 2 - 1.000 1.000 - - - - - - si:dkey-16j24.1, transcript variant X1
3. nudt13 ENSDARG00000057417, ENSDARG00000115835 46 2 - 1.000 1.000 - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 13 [Source:ZFIN;Acc:ZDB-GENE-040724-60]
4. CABZ01033130.1 CABZ01033130.1 5 2 - 1.000 - - - - - - 1.000
5. SNORA53 SNORA53 10 2 - - 1.000 - - - - - 1.000
6. si:ch211-215m21.27 si:ch211-215m21.27 3 2 - 1.000 1.000 - - - - - -
7. syne2a_1 0 2 - - 1.000 - - - - - 1.000 spectrin repeat containing, nuclear envelope 2a
8. fn3krp ENSDARG00000098208 4 1.867 - - 1.000 - - - - - 0.867 fructosamine 3 kinase related protein [Source:ZFIN;Acc:ZDB-GENE-041010-192]
9. si:dkey-242e21.3 ENSDARG00000075723 77 1.807 - 0.940 - - - - - - 0.867 si:dkey-242e21.3 [Source:ZFIN;Acc:ZDB-GENE-100922-110]
10. GPR153 ENSDARG00000087601 48 1.674 - 0.885 0.789 - - - - - - G protein-coupled receptor 153 [Source:ZFIN;Acc:ZDB-GENE-050823-7]
11. tbx20 ENSDARG00000005150 335 1.504 - 0.798 0.706 - - - - - - T-box 20 [Source:ZFIN;Acc:ZDB-GENE-000427-7]
12. ENSDARG00000006874 ENSDARG00000006874 3 1 - 1.000 - - - - - - -
13. mir124-1 10 1 - - 1.000 - - - - - - microRNA 124-1
14. fam196ab 2 1 - - - - - - - - 1.000 family with sequence similarity 196, member Ab
15. sh2d4b sh2d4b 1 1 - - 1.000 - - - - - -
16. BX088525.2 ENSDARG00000117222 11 1 - - - - - - - - 1.000
17. si:dkey-11f4.20 ENSDARG00000100887 38 1 - - 1.000 - - - - - - si:dkey-11f4.20 [Source:ZFIN;Acc:ZDB-GENE-070912-359]
18. si:dkey-222o15.3 si:dkey-222o15.3 3 1 - - - - - - - - 1.000
19. prrg2 ENSDARG00000087193 15 1 - 1.000 - - - - - - - proline rich Gla (G-carboxyglutamic acid) 2 [Source:ZFIN;Acc:ZDB-GENE-130625-1]
20. MYO15B ENSDARG00000074852 6 1 - 1.000 - - - - - - - myosin XVB [Source:ZFIN;Acc:ZDB-GENE-030131-4797]
21. si:ch211-197k17.3 ENSDARG00000096214 2 1 - - - - - - - - 1.000 si:ch211-197k17.3 [Source:ZFIN;Acc:ZDB-GENE-110914-193]
22. si:dkey-211e20.3 si:dkey-211e20.3 1 1 - - 1.000 - - - - - -
23. habp2 ENSDARG00000057498 75 1 - 1.000 - - - - - - - hyaluronan binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4721]
24. si:dkey-165g20.2 si:dkey-165g20.2 3 1 - - 1.000 - - - - - -
25. si:dkey-191j3.2 ENSDARG00000101997 1 1 - - 1.000 - - - - - - si:dkey-191j3.2 [Source:ZFIN;Acc:ZDB-GENE-081103-55]
26. cabp7b ENSDARG00000060846 5 1 - - 1.000 - - - - - - calcium binding protein 7b [Source:ZFIN;Acc:ZDB-GENE-060526-366]
27. vtg6 ENSDARG00000016825, ENSDARG00000114847 1 1 - 1.000 - - - - - - - vitellogenin 6 [Source:ZFIN;Acc:ZDB-GENE-001201-5]
28. si:dkey-211i20.3 si:dkey-211i20.3 1 1 - - - - - - - - 1.000
29. ftr79 ENSDARG00000093972 1 1 - - - - - - - - 1.000 finTRIM family, member 79 [Source:ZFIN;Acc:ZDB-GENE-060126-4]
30. mxd ENSDARG00000023369 8 1 - - 1.000 - - - - - - myxovirus (influenza virus) resistance D [Source:ZFIN;Acc:ZDB-GENE-030721-8]
31. MUC5AC_1 MUC5AC_1 381 1 - 1.000 - - - - - - -
32. si:ch211-274f20.4 si:ch211-274f20.4 0 1 - - 1.000 - - - - - -
33. si:dkey-47k16.3 si:dkey-47k16.3 17 1 - - - - - - - - 1.000
34. nup85 ENSDARG00000098679 2 1 - - 1.000 - - - - - - nucleoporin 85 [Source:ZFIN;Acc:ZDB-GENE-040801-145]
35. taar13d ENSDARG00000110650 0 1 - - - - - - - - 1.000 trace amine associated receptor 13d [Source:ZFIN;Acc:ZDB-GENE-041014-62]
36. SNORA62_1 SNORA62_1 1 1 - - - - - - - - 1.000
37. samd10b ENSDARG00000094377 18 1 - 1.000 - - - - - - - sterile alpha motif domain containing 10b [Source:ZFIN;Acc:ZDB-GENE-090312-179]
38. dlgap1a ENSDARG00000014280 1 1 - 1.000 - - - - - - - discs, large (Drosophila) homolog-associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030616-580]
39. C12H10orf107 C12H10orf107 8 1 - 1.000 - - - - - - -
40. calhm2 ENSDARG00000039482 138 1 - 1.000 - - - - - - - calcium homeostasis modulator 2 [Source:ZFIN;Acc:ZDB-GENE-030616-561]
41. si:ch211-131e11.14 si:ch211-131e11.14 7 1 - - - - - - - - 1.000
42. BX908759.1 BX908759.1 52 1 - 1.000 - - - - - - -
43. UBE2O 1 1 - - - - - - - - 1.000 ubiquitin-conjugating enzyme E2O
44. DTX4_1 ENSDARG00000076302 31 1 - 1.000 - - - - - - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
45. PEG3_36 PEG3_36 3 1 - - 1.000 - - - - - -
46. U4_1 U4_1 2 1 - - 1.000 - - - - - -
47. C7H15orf43 C7H15orf43 10 1 - 1.000 - - - - - - -
48. CABZ01071909.3 CABZ01071909.3 14 1 - 1.000 - - - - - - -
49. SLC16A7 ENSDARG00000098258 4 1 - 1.000 - - - - - - - solute carrier family 16 member 7 [Source:HGNC Symbol;Acc:HGNC:10928]
50. gbgt1l3 ENSDARG00000035555, ENSDARG00000091969 91 1 - 1.000 - - - - - - - globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 3 [Source:ZFIN;Acc:ZDB-GENE-040912-46]
51. si:dkey-15h8.13 si:dkey-15h8.13 3 1 - 1.000 - - - - - - -
52. tnfrsfa ENSDARG00000004451 4 1 - - - - - - - - 1.000 tumor necrosis factor receptor superfamily, member a [Source:ZFIN;Acc:ZDB-GENE-010802-1]
53. 5S_rRNA_10 5S_rRNA_10 2 1 - - 1.000 - - - - - -
54. iffo2a ENSDARG00000062101, ENSDARG00000111078 0 1 - - 1.000 - - - - - - intermediate filament family orphan 2a [Source:ZFIN;Acc:ZDB-GENE-090313-342]
55. zgc:173603 zgc:173603 2 1 - - - - - - - - 1.000
56. VWDE ENSDARG00000103443 10 1 - - - - - - - - 1.000 von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
57. si:ch211-169j7.3 si:ch211-169j7.3 4 1 - - - - - - - - 1.000
58. or115-8 ENSDARG00000092406 1 1 - - - - - - - - 1.000 odorant receptor, family F, subfamily 115, member 8 [Source:ZFIN;Acc:ZDB-GENE-070806-10]
59. chrna4 chrna4 3 1 - - 1.000 - - - - - -
60. GPR26 ENSDARG00000074389, ENSDARG00000116243 21 1 - 1.000 - - - - - - - G protein-coupled receptor 26 [Source:ZFIN;Acc:ZDB-GENE-131121-131]
61. SYDE1 ENSDARG00000077440 4 1 - - - - - - - - 1.000 synapse defective Rho GTPase homolog 1 [Source:HGNC Symbol;Acc:HGNC:25824]
62. si:ch211-284e13.9 ENSDARG00000093214 2 1 - - - - - - - - 1.000 si:ch211-284e13.9 [Source:ZFIN;Acc:ZDB-GENE-060526-164]
63. si:ch73-36i7.2 si:ch73-36i7.2 5 1 - - 1.000 - - - - - -
64. si:dkey-163m14.7 65 1 - 1.000 - - - - - - - si:dkey-163m14.7
65. zp2.3 ENSDARG00000090237 45 1 - - - - - - - - 1.000 zona pellucida glycoprotein 2, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-010622-2]
66. si:dkeyp-98a7.10 si:dkeyp-98a7.10 7 1 - 1.000 - - - - - - -
67. ino80da ENSDARG00000104727 8 1 - 1.000 - - - - - - - INO80 complex subunit Da [Source:ZFIN;Acc:ZDB-GENE-091204-416]
68. SLC4A3 ENSDARG00000104005 2 1 - - 1.000 - - - - - - solute carrier family 4 (anion exchanger), member 3 [Source:ZFIN;Acc:ZDB-GENE-141006-1]
69. b3gnt9 ENSDARG00000041616 0 1 - - 1.000 - - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9 [Source:ZFIN;Acc:ZDB-GENE-060503-611]
70. FP085391.3 FP085391.3 14 1 - 1.000 - - - - - - -
71. l3mbtl3 ENSDARG00000025983 12 1 - - - - - - - - 1.000 l(3)mbt-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040724-127]
72. CCDC171 ENSDARG00000027381 3 1 - - 1.000 - - - - - - coiled-coil domain containing 171 [Source:ZFIN;Acc:ZDB-GENE-110411-270]
73. edil3 edil3 24 1 - 1.000 - - - - - - -
74. FP340264.1 FP340264.1 0 1 - - 1.000 - - - - - -
75. KSR1_1 KSR1_1 1 1 - - - - - - - - 1.000
76. BX465848.3 BX465848.3 4 1 - 1.000 - - - - - - -
77. NUGGC NUGGC 9 1 - - - - - - - - 1.000
78. cd28 ENSDARG00000095070 0 1 - - - - - - - - 1.000 CD28 molecule [Source:ZFIN;Acc:ZDB-GENE-070912-128]
79. CR354549.1 ENSDARG00000117215 3 1 - 1.000 - - - - - - -
80. cd247l ENSDARG00000077240 25 1 - 1.000 - - - - - - - CD247 antigen like [Source:ZFIN;Acc:ZDB-GENE-070508-2]
81. si:dkey-11n6.3 si:dkey-11n6.3 1 1 - - - - - - - - 1.000
82. zgc:113343 ENSDARG00000103196 2 1 - - - - - - - - 1.000 zgc:113343 [Source:ZFIN;Acc:ZDB-GENE-050327-90]
83. soul5l ENSDARG00000089879 20 1 - 1.000 - - - - - - - heme-binding protein soul5, like [Source:ZFIN;Acc:ZDB-GENE-121214-315]
84. SNORD12_1 SNORD12_1 0 1 - - 1.000 - - - - - -
85. si:dkey-71b5.3 ENSDARG00000095522 1 1 - 1.000 - - - - - - - si:dkey-71b5.3 [Source:ZFIN;Acc:ZDB-GENE-100922-91]
86. CABZ01072856.1 CABZ01072856.1 0 1 - - 1.000 - - - - - -
87. CRYGM4 ENSDARG00000008219 1 1 - - - - - - - - 1.000 crystallin, gamma M4 [Source:ZFIN;Acc:ZDB-GENE-120312-2]
88. si:dkeyp-68b7.6 si:dkeyp-68b7.6 7 1 - - - - - - - - 1.000
89. si:ch211-202m22.1 ENSDARG00000094491 24 1 - - 1.000 - - - - - - si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
90. CR356247.1 CR356247.1 2 1 - - 1.000 - - - - - -
91. si:dkey-176f19.5 si:dkey-176f19.5 10 1 - - - - - - - - 1.000
92. ANO2 ENSDARG00000101363 1 1 - - 1.000 - - - - - - anoctamin 2 [Source:ZFIN;Acc:ZDB-GENE-060503-62]
93. pcdh2g5 1 1 - - 1.000 - - - - - - protocadherin 2 gamma 5
94. si:ch211-117i10.10 si:ch211-117i10.10 18 1 - 1.000 - - - - - - -
95. BX000442.2 BX000442.2 8 1 - - - - - - - - 1.000
96. CU693477.1 CU693477.1 7 1 - 1.000 - - - - - - -
97. si:dkey-246j6.3 ENSDARG00000103497 2 1 - 1.000 - - - - - - - si:dkey-246j6.3 [Source:ZFIN;Acc:ZDB-GENE-110913-132]
98. ABCD2 ENSDARG00000059409 1 1 - - - - - - - - 1.000 ATP-binding cassette, sub-family D (ALD), member 2 [Source:ZFIN;Acc:ZDB-GENE-050517-28]
99. si:dkey-88l16.3 ENSDARG00000094055 0 1 - - - - - - - - 1.000 si:dkey-88l16.3 [Source:ZFIN;Acc:ZDB-GENE-030131-6015]
100. CR388416.3 CR388416.3 1 1 - - - - - - - - 1.000

There are 566 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA