Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-173p18.3

Gene Name Gene ID Reads Annotation
si:ch211-173p18.3 ENSDARG00000035821 1917 si:ch211-173p18.3 [Source:ZFIN;Acc:ZDB-GENE-060503-672]










Genes with expression patterns similar to si:ch211-173p18.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-173p18.3 ENSDARG00000035821 1917 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-173p18.3 [Source:ZFIN;Acc:ZDB-GENE-060503-672]
2. hmbox1a ENSDARG00000027082 2569 2.313 - 0.808 - - - - 0.799 - 0.706 homeobox containing 1a [Source:ZFIN;Acc:ZDB-GENE-050913-89]
3. sumo3a ENSDARG00000028119 13447 2.311 - - - - - 0.717 0.768 - 0.826 small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
4. pum1 ENSDARG00000099256 5017 2.2 - 0.702 - - - 0.778 - - 0.720 pumilio RNA-binding family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2074]
5. tgif1 ENSDARG00000059337 4020 2.196 - 0.755 0.724 - - - - - 0.717 TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
6. mxi1 ENSDARG00000040884, ENSDARG00000111950 3239 1.638 - 0.871 - - - - - - 0.767 max interactor 1, dimerization protein [Source:ZFIN;Acc:ZDB-GENE-990415-151]
7. EPHB3 2215 1.631 - 0.880 - - - 0.751 - - - EPH receptor B3
8. plxna3 ENSDARG00000007172 1412 1.62 - 0.853 - - - - - - 0.767 plexin A3 [Source:ZFIN;Acc:ZDB-GENE-070613-1]
9. cenpw ENSDARG00000092136 1684 1.609 - - - - - - 0.890 0.719 - centromere protein W [Source:ZFIN;Acc:ZDB-GENE-100922-200]
10. CREM CREM 1333 1.603 - 0.849 - - - - 0.754 - -
11. BX085195.1 BX085195.1 995 1.597 - - - - - 0.808 - - 0.789
12. tbl1xr1a ENSDARG00000058696 5439 1.586 - 0.837 - - - - - - 0.749 transducin (beta)-like 1 X-linked receptor 1a [Source:ZFIN;Acc:ZDB-GENE-050522-314]
13. rbms3 ENSDARG00000044574 2514 1.577 - 0.777 - - - 0.800 - - - RNA binding motif, single stranded interacting protein [Source:ZFIN;Acc:ZDB-GENE-060929-244]
14. CT573103.1 ENSDARG00000097550 950 1.576 - 0.864 - - - - 0.712 - -
15. CABZ01081148.1 CABZ01081148.1 789 1.569 - 0.769 - - - 0.800 - - -
16. sp4 ENSDARG00000005186 2904 1.563 - - - - - - 0.759 - 0.804 sp4 transcription factor [Source:ZFIN;Acc:ZDB-GENE-031202-3]
17. smc1al ENSDARG00000058203 8838 1.56 - - - - - 0.784 - - 0.776 structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
18. SYMPK ENSDARG00000059553 1159 1.552 - - - - - - 0.766 - 0.786 symplekin [Source:ZFIN;Acc:ZDB-GENE-060526-361]
19. CREBZF ENSDARG00000089787 4261 1.547 - - - - - 0.707 - - 0.840 CREB/ATF bZIP transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-8015]
20. PPP4R1L ENSDARG00000099379 2132 1.53 - 0.826 - - - - - - 0.704 protein phosphatase 4, regulatory subunit 1-like [Source:ZFIN;Acc:ZDB-GENE-121022-4]
21. gli2a ENSDARG00000025641 2154 1.527 - 0.726 - - - 0.801 - - - GLI family zinc finger 2a [Source:ZFIN;Acc:ZDB-GENE-990706-8]
22. PCBP4 ENSDARG00000024276 3194 1.524 - - - - - - - 0.806 0.718 poly(rC) binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2122]
23. tnks tnks 1695 1.519 - - - - - 0.804 - - 0.715
24. zbtb18 ENSDARG00000028228 3653 1.518 0.768 - - - - - - - 0.750 zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
25. grb2b ENSDARG00000038059 9050 1.514 - - - - - 0.728 0.786 - - growth factor receptor-bound protein 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1975]
26. rps6ka3a ENSDARG00000035556, ENSDARG00000116641 3608 1.511 - 0.811 - - - - 0.700 - - ribosomal protein S6 kinase a, polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-030219-119]
27. usp7 ENSDARG00000073710 7017 1.5 0.798 - - - - - - - 0.702 ubiquitin specific peptidase 7 (herpes virus-associated) [Source:ZFIN;Acc:ZDB-GENE-030131-3656]
28. kif22 ENSDARG00000102624 3694 1.498 - - - - - 0.727 - - 0.771 kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
29. matr3l1.1_1 ENSDARG00000000394, ENSDARG00000001162 1860 1.497 - - - - - - - 0.739 0.758 matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
30. serinc1 ENSDARG00000009106 10571 1.493 - - - - - - 0.720 - 0.773 serine incorporator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4415]
31. znf319 znf319 3027 1.493 - - - - - 0.723 - - 0.770
32. hoxd4a ENSDARG00000059276 1516 1.488 - - - - - 0.774 0.714 - - homeobox D4a [Source:ZFIN;Acc:ZDB-GENE-980526-214]
33. WAPAL WAPAL 1888 1.488 - - - - - 0.715 - - 0.773
34. cdk6 ENSDARG00000070228 1778 1.486 - - - - - 0.727 - - 0.759 cyclin-dependent kinase 6 [Source:ZFIN;Acc:ZDB-GENE-060503-786]
35. phf21ab ENSDARG00000021378 1706 1.479 - - - - - - - 0.738 0.741 PHD finger protein 21Ab [Source:ZFIN;Acc:ZDB-GENE-030131-6456]
36. plcg1 ENSDARG00000038442 5324 1.479 0.758 - - - - 0.721 - - - phospholipase C, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030421-3]
37. gpatch8 ENSDARG00000059768 2743 1.478 - 0.766 - - - 0.712 - - - G patch domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-030131-6966]
38. rbpjb ENSDARG00000052091 3122 1.478 - - 0.746 - - - - - 0.732 recombination signal binding protein for immunoglobulin kappa J region b [Source:ZFIN;Acc:ZDB-GENE-070319-1]
39. FNBP4 ENSDARG00000051800 2839 1.476 - - - - - 0.731 - - 0.745 formin binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-130530-633]
40. smg7 ENSDARG00000060767 2759 1.476 - 0.719 - - - - - - 0.757 SMG7 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-030131-9122]
41. srgap2a srgap2a 7197 1.472 - 0.754 - - - - 0.718 - -
42. slc9a7 ENSDARG00000076754 599 1.471 - 0.764 - - - 0.707 - - - solute carrier family 9, subfamily A (NHE7, cation proton antiporter 7), member 7 [Source:ZFIN;Acc:ZDB-GENE-050913-8]
43. si:dkey-202p8.1 si:dkey-202p8.1 598 1.464 - 0.730 - - - - 0.734 - -
44. pi4kb ENSDARG00000040111, ENSDARG00000111175 2132 1.463 - 0.732 - - - - 0.731 - - phosphatidylinositol 4-kinase, catalytic, beta [Source:ZFIN;Acc:ZDB-GENE-061013-96]
45. bmpr2a ENSDARG00000011941 2972 1.462 - 0.744 - - - - - - 0.718 bone morphogenetic protein receptor, type II a (serine/threonine kinase) [Source:ZFIN;Acc:ZDB-GENE-070618-1]
46. smad7 ENSDARG00000016858 1660 1.461 - - - - - 0.723 0.738 - - SMAD family member 7 [Source:ZFIN;Acc:ZDB-GENE-030128-3]
47. si:dkeyp-113d7.1 ENSDARG00000059109 2145 1.457 0.724 - - - - - - - 0.733 si:dkeyp-113d7.1 [Source:ZFIN;Acc:ZDB-GENE-030131-755]
48. si:dkeyp-44a8.2 ENSDARG00000092493 8308 1.457 - - - - - - 0.703 - 0.754 si:dkeyp-44a8.2 [Source:ZFIN;Acc:ZDB-GENE-070705-542]
49. znf827 ENSDARG00000076171 6304 1.451 - - - - - 0.707 - - 0.744 zinc finger protein 827 [Source:ZFIN;Acc:ZDB-GENE-080728-3]
50. rhoaa ENSDARG00000026845 6900 1.441 - - - - - 0.706 - - 0.735 ras homolog gene family, member Aa [Source:ZFIN;Acc:ZDB-GENE-040426-2150]
51. chaf1a ENSDARG00000062152, ENSDARG00000114749 5342 1.429 - - - - - - 0.707 - 0.722 chromatin assembly factor 1, subunit A (p150) [Source:ZFIN;Acc:ZDB-GENE-030131-5366]
52. gnb1b_1 ENSDARG00000104372 3728 1.428 - - - - - 0.723 - - 0.705 guanine nucleotide binding protein (G protein), beta polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2855]
53. rad54l2 ENSDARG00000063031 821 1.422 - 0.712 - - - - - - 0.710 RAD54 like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3097]
54. magi1b ENSDARG00000003169 2056 1.421 - - - - - 0.718 0.703 - - membrane associated guanylate kinase, WW and PDZ domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5110]
55. kdm1a ENSDARG00000060679 6152 1.421 - 0.712 0.709 - - - - - - lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
56. irf2bpl ENSDARG00000004297 1861 1.414 - - - - - 0.703 - - 0.711 interferon regulatory factor 2 binding protein-like [Source:ZFIN;Acc:ZDB-GENE-040426-1968]
57. prrc2c ENSDARG00000057583, ENSDARG00000116399 1673 1.411 - - - - - 0.705 - - 0.706 proline-rich coiled-coil 2C [Source:ZFIN;Acc:ZDB-GENE-081104-156]
58. arih2 ENSDARG00000012848 7087 1.411 - - - - - - 0.705 - 0.706 ariadne homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-2158]
59. gorasp1 gorasp1 3075 0.925 - 0.925 - - - - - - -
60. CNNM2 CNNM2 225 0.919 - 0.919 - - - - - - -
61. atg5 ENSDARG00000023396 1726 0.891 - 0.891 - - - - - - - ATG5 autophagy related 5 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040801-149]
62. nrarpb ENSDARG00000018958 6225 0.882 - - - - - - - - 0.882 NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
63. adhfe1 ENSDARG00000053518 499 0.878 - 0.878 - - - - - - - alcohol dehydrogenase, iron containing, 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2070]
64. arrdc3a ENSDARG00000052690 2280 0.878 - 0.878 - - - - - - - arrestin domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2913]
65. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 0.877 - - - - - - - - 0.877 EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
66. med16 ENSDARG00000040779, ENSDARG00000116309 939 0.875 - - - - - - - - 0.875 mediator complex subunit 16 [Source:ZFIN;Acc:ZDB-GENE-090306-4]
67. zgc:113184 ENSDARG00000098181 500 0.87 - 0.870 - - - - - - - zgc:113184 [Source:ZFIN;Acc:ZDB-GENE-050522-9]
68. FNIP2 FNIP2 593 0.87 - 0.870 - - - - - - -
69. lin7c ENSDARG00000027322 3083 0.869 - 0.869 - - - - - - - lin-7 homolog C (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-041011-2]
70. qser1 ENSDARG00000074750 597 0.868 - 0.868 - - - - - - - glutamine and serine rich 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2978]
71. arcn1a ENSDARG00000002792 2847 0.868 - 0.868 - - - - - - - archain 1a [Source:ZFIN;Acc:ZDB-GENE-021031-2]
72. gsna ENSDARG00000011459, ENSDARG00000115062, ENSDARG00000116084 1623 0.866 - 0.866 - - - - - - - gelsolin a [Source:ZFIN;Acc:ZDB-GENE-030131-9653]
73. ptpn2b ENSDARG00000035986 909 0.866 - 0.866 - - - - - - - protein tyrosine phosphatase, non-receptor type 2, b [Source:ZFIN;Acc:ZDB-GENE-030909-8]
74. xpnpep1 ENSDARG00000029011 1723 0.864 - 0.864 - - - - - - - X-prolyl aminopeptidase (aminopeptidase P) 1, soluble [Source:ZFIN;Acc:ZDB-GENE-040426-999]
75. ep300b ENSDARG00000061108 5173 0.861 - 0.861 - - - - - - - E1A binding protein p300 b [Source:ZFIN;Acc:ZDB-GENE-080403-15]
76. wu:fk48d07 wu:fk48d07 13245 0.858 - - - - - - - - 0.858
77. OAF OAF 459 0.858 - 0.858 - - - - - - -
78. smpd1 ENSDARG00000076121 584 0.856 - 0.856 - - - - - - - sphingomyelin phosphodiesterase 1, acid lysosomal [Source:ZFIN;Acc:ZDB-GENE-110411-222]
79. TAF15 ENSDARG00000070019 5102 0.856 - - - - - - - - 0.856 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-061215-102]
80. tnikb ENSDARG00000009031 1836 0.856 - 0.856 - - - - - - - TRAF2 and NCK interacting kinase b [Source:ZFIN;Acc:ZDB-GENE-051113-320]
81. fbxw2 ENSDARG00000009745 618 0.855 - 0.855 - - - - - - - F-box and WD repeat domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050522-303]
82. uxt ENSDARG00000019339 526 0.855 - 0.855 - - - - - - - ubiquitously-expressed, prefoldin-like chaperone [Source:ZFIN;Acc:ZDB-GENE-040912-118]
83. ugt1b4 ENSDARG00000097024 1848 0.854 - 0.854 - - - - - - - UDP glucuronosyltransferase 1 family, polypeptide B4 [Source:ZFIN;Acc:ZDB-GENE-080227-13]
84. nus1 ENSDARG00000027813 1417 0.854 - 0.854 - - - - - - - NUS1, dehydrodolichyl diphosphate synthase subunit [Source:ZFIN;Acc:ZDB-GENE-040718-48]
85. depdc1a ENSDARG00000018165, ENSDARG00000114097 1958 0.853 - - - - - - - 0.853 - DEP domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9827]
86. SLC22A3 SLC22A3 173 0.852 - 0.852 - - - - - - -
87. hnrnpub ENSDARG00000004735 16496 0.851 - - - - - - - - 0.851 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
88. cpz ENSDARG00000075521 2356 0.85 - 0.850 - - - - - - - carboxypeptidase Z [Source:ZFIN;Acc:ZDB-GENE-090313-267]
89. rap2b ENSDARG00000103032 2080 0.849 - 0.849 - - - - - - - RAP2B, member of RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040426-2818]
90. dusp6 ENSDARG00000070914, ENSDARG00000116888 4473 0.849 - 0.849 - - - - - - - dual specificity phosphatase 6 [Source:ZFIN;Acc:ZDB-GENE-030613-1]
91. zgc:112964 ENSDARG00000101200 4751 0.847 - 0.847 - - - - - - - zgc:112964 [Source:ZFIN;Acc:ZDB-GENE-050306-47]
92. faf2 ENSDARG00000052374 1351 0.847 - 0.847 - - - - - - - Fas associated factor family member 2 [Source:ZFIN;Acc:ZDB-GENE-050208-312]
93. tmem198b ENSDARG00000034685, ENSDARG00000111728 639 0.847 - 0.847 - - - - - - - transmembrane protein 198b [Source:ZFIN;Acc:ZDB-GENE-050809-123]
94. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 0.845 - - - - - - - - 0.845 leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
95. ATP13A3 ENSDARG00000076622 1000 0.845 - 0.845 - - - - - - - ATPase 13A3 [Source:ZFIN;Acc:ZDB-GENE-120521-1]
96. nupr1 6040 0.845 - 0.845 - - - - - - - nuclear protein 1
97. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 0.845 - - - - - - - - 0.845 splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
98. cux1b ENSDARG00000043134 641 0.843 - 0.843 - - - - - - - cut-like homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040801-260]
99. mxd3 ENSDARG00000098350 3040 0.842 - - - - - - - - 0.842 MAX dimerization protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1588]
100. zgc:158403 ENSDARG00000062757 710 0.842 - 0.842 - - - - - - - zgc:158403 [Source:ZFIN;Acc:ZDB-GENE-061215-116]

There are 1001 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA