Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-173n18.4

Gene Name Gene ID Reads Annotation
si:ch211-173n18.4 129 si:ch211-173n18.4, transcript variant X1










Genes with expression patterns similar to si:ch211-173n18.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-173n18.4 129 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-173n18.4, transcript variant X1
2. BX004873.3 BX004873.3 59 1.952 1.000 0.952 - - - - - - -
3. PARP4 ENSDARG00000069934 70 1.919 1.000 - - - - - 0.919 - - poly (ADP-ribose) polymerase family, member 4 [Source:ZFIN;Acc:ZDB-GENE-070912-387]
4. elna 38 1.814 0.878 0.936 - - - - - - - elastin a, transcript variant X20
5. eno1b ENSDARG00000013750 63 1.786 - 0.888 - - - - 0.898 - - enolase 1b, (alpha) [Source:ZFIN;Acc:ZDB-GENE-040426-1651]
6. arhgap25 ENSDARG00000061784 112 1.751 - 0.875 - - - - 0.876 - - Rho GTPase activating protein 25 [Source:ZFIN;Acc:ZDB-GENE-060526-210]
7. slc7a9 ENSDARG00000005894 29 1.749 1.000 - - - - - - 0.749 - solute carrier family 7 (amino acid transporter light chain, bo,+ system), member 9 [Source:ZFIN;Acc:ZDB-GENE-080116-2]
8. GLIS2 GLIS2 141 1.72 0.810 - - - - - 0.910 - -
9. TMEM55B TMEM55B 76 1.671 - 0.858 - - - - 0.813 - -
10. sdccag8 ENSDARG00000078947 68 1.665 0.841 0.824 - - - - - - - serologically defined colon cancer antigen 8 [Source:ZFIN;Acc:ZDB-GENE-090313-318]
11. hoxc11b ENSDARG00000102631 808 1.662 0.953 0.709 - - - - - - - homeobox C11b [Source:ZFIN;Acc:ZDB-GENE-000822-3]
12. vasna ENSDARG00000099266, ENSDARG00000111629 488 1.599 - 0.805 - - - - 0.794 - - vasorin a [Source:ZFIN;Acc:ZDB-GENE-050522-43]
13. THEG ENSDARG00000078644 121 1.585 - 0.711 - - - - 0.874 - - theg spermatid protein [Source:ZFIN;Acc:ZDB-GENE-070912-59]
14. zbtb1 ENSDARG00000023040, ENSDARG00000112571 211 1.579 0.775 - - - - 0.804 - - - zinc finger and BTB domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041001-126]
15. KIF20B KIF20B 800 1.567 - 0.821 - - - - 0.746 - -
16. zgc:153704 ENSDARG00000045979 11 1.558 - - - - - - 0.858 - 0.700 zgc:153704 [Source:ZFIN;Acc:ZDB-GENE-060929-1114]
17. itga11b ENSDARG00000007950 17 1.546 - - - - - - 0.832 0.714 - integrin, alpha 11b [Source:ZFIN;Acc:ZDB-GENE-071009-4]
18. tsnaxip1 ENSDARG00000030512 197 1.516 0.706 0.810 - - - - - - - translin-associated factor X interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-070424-39]
19. ppp1r11 ENSDARG00000036063 587 1.501 - - - - - 0.756 0.745 - - protein phosphatase 1, regulatory (inhibitor) subunit 11 [Source:ZFIN;Acc:ZDB-GENE-050417-99]
20. USP43 USP43 14 1.473 - - - - 0.732 - - 0.741 -
21. mctp2a ENSDARG00000001414 307 1.464 - 0.752 - - - - 0.712 - - multiple C2 domains, transmembrane 2a [Source:ZFIN;Acc:ZDB-GENE-040724-63]
22. alkbh4 ENSDARG00000052247 306 1.462 - - - - - 0.714 0.748 - - alkB homolog 4, lysine demthylase [Source:ZFIN;Acc:ZDB-GENE-060526-275]
23. mapre3b ENSDARG00000102878 362 1.461 - - - - 0.733 - 0.728 - - microtubule-associated protein, RP/EB family, member 3b [Source:ZFIN;Acc:ZDB-GENE-040704-6]
24. trim2a ENSDARG00000031817 224 1.459 0.739 0.720 - - - - - - - tripartite motif containing 2a [Source:ZFIN;Acc:ZDB-GENE-050327-99]
25. itga3a ENSDARG00000037917 219 1.449 - 0.705 - - - - 0.744 - - integrin, alpha 3a [Source:ZFIN;Acc:ZDB-GENE-090805-3]
26. chd 56 1.437 0.715 - - - - 0.722 - - - chordin
27. foxn3 ENSDARG00000012833 169 1.415 - 0.704 - - - - 0.711 - - forkhead box N3 [Source:ZFIN;Acc:ZDB-GENE-060512-39]
28. parp12a ENSDARG00000042496 82 1 1.000 - - - - - - - - poly (ADP-ribose) polymerase family, member 12a [Source:ZFIN;Acc:ZDB-GENE-050419-6]
29. ENSDARG00000088134 ENSDARG00000088134 16 1 1.000 - - - - - - - -
30. si:dkey-91f15.8 18 1 1.000 - - - - - - - - si:dkey-91f15.8, transcript variant X1
31. cyp2k18 ENSDARG00000104593 27 1 1.000 - - - - - - - - cytochrome P450, family 2, subfamily K, polypeptide 18 [Source:ZFIN;Acc:ZDB-GENE-040426-1584]
32. atg16l2 ENSDARG00000043238, ENSDARG00000109384 10 1 1.000 - - - - - - - - ATG16 autophagy related 16-like 2 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060503-197]
33. si:ch211-276a17.5 ENSDARG00000096398 1 1 1.000 - - - - - - - - si:ch211-276a17.5 [Source:ZFIN;Acc:ZDB-GENE-120215-248]
34. pygo1 ENSDARG00000098687 4 1 1.000 - - - - - - - - pygopus family PHD finger 1 [Source:ZFIN;Acc:ZDB-GENE-080204-62]
35. si:dkey-39e8.5 si:dkey-39e8.5 2 1 1.000 - - - - - - - -
36. si:dkey-15h19.3 si:dkey-15h19.3 5 1 1.000 - - - - - - - -
37. elavl2 ENSDARG00000040732 44 1 1.000 - - - - - - - - ELAV like neuron-specific RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040704-9]
38. C3 C3 46 1 1.000 - - - - - - - -
39. cldn10l2 ENSDARG00000105042 11 1 1.000 - - - - - - - - claudin 10-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9598]
40. hal ENSDARG00000017444 11 1 1.000 - - - - - - - - histidine ammonia-lyase [Source:ZFIN;Acc:ZDB-GENE-070410-5]
41. TMC5 ENSDARG00000013252 22 1 1.000 - - - - - - - - transmembrane channel like 5 [Source:ZFIN;Acc:ZDB-GENE-120411-6]
42. frzb ENSDARG00000018383 93 1 1.000 - - - - - - - - frizzled related protein [Source:ZFIN;Acc:ZDB-GENE-990715-1]
43. si:ch211-285c6.4 ENSDARG00000095410 4 1 1.000 - - - - - - - - si:ch211-285c6.4 [Source:ZFIN;Acc:ZDB-GENE-041001-97]
44. EPS8 78 1 1.000 - - - - - - - - epidermal growth factor receptor pathway substrate 8, transcript variant X14
45. CABZ01059392.1 ENSDARG00000063108 3 1 1.000 - - - - - - - - uncharacterized LOC100334305 [Source:NCBI gene;Acc:100334305]
46. C18H15orf26 C18H15orf26 36 1 - 1.000 - - - - - - -
47. Metazoa_SRP_6 Metazoa_SRP_6 7 1 1.000 - - - - - - - -
48. zgc:173556 82 1 1.000 - - - - - - - - zgc:173556
49. tor1l1 ENSDARG00000055856 1 1 1.000 - - - - - - - - torsin family 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-080723-36]
50. plxnc1 ENSDARG00000015278 501 1 1.000 - - - - - - - - plexin C1 [Source:ZFIN;Acc:ZDB-GENE-030131-1620]
51. ctssb.2 ctssb.2 122 1 1.000 - - - - - - - -
52. CDH12_1 CDH12_1 57 1 1.000 - - - - - - - -
53. CABZ01002626.1 CABZ01002626.1 29 1 1.000 - - - - - - - -
54. pld6 ENSDARG00000059951 17 1 1.000 - - - - - - - - phospholipase D family, member 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3825]
55. slc7a1 ENSDARG00000016439, ENSDARG00000115084 32 1 1.000 - - - - - - - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 [Source:ZFIN;Acc:ZDB-GENE-091116-69]
56. zgc:103510 ENSDARG00000027699 13 1 1.000 - - - - - - - - zgc:103510 [Source:ZFIN;Acc:ZDB-GENE-041212-27]
57. ADCK3 101 1 1.000 - - - - - - - - aarF domain containing kinase 3
58. ENSDARG00000089100 ENSDARG00000089100 5 1 1.000 - - - - - - - -
59. CABZ01078314.1 CABZ01078314.1 44 1 1.000 - - - - - - - -
60. CABZ01112215.1 CABZ01112215.1 23 1 1.000 - - - - - - - -
61. erap2 ENSDARG00000098618 16 1 1.000 - - - - - - - - endoplasmic reticulum aminopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-080402-6]
62. CCDC178 4 1 1.000 - - - - - - - - coiled-coil domain containing 178, transcript variant X3
63. KCNJ12 KCNJ12 17 1 1.000 - - - - - - - -
64. si:ch211-203k16.3 ENSDARG00000069305 21 1 1.000 - - - - - - - - si:ch211-203k16.3 [Source:ZFIN;Acc:ZDB-GENE-041014-290]
65. st8sia7.1 ENSDARG00000054211 34 1 1.000 - - - - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 7.1 [Source:ZFIN;Acc:ZDB-GENE-090504-4]
66. slc13a5 slc13a5 15 1 1.000 - - - - - - - -
67. gatsl3 7 1 1.000 - - - - - - - - GATS protein-like 3
68. zgc:173702_1 ENSDARG00000110229 24 1 1.000 - - - - - - - - zgc:173702 [Source:ZFIN;Acc:ZDB-GENE-080208-3]
69. PAQR8 ENSDARG00000088828 26 1 1.000 - - - - - - - - progestin and adipoQ receptor family member VIII [Source:ZFIN;Acc:ZDB-GENE-030728-3]
70. CABZ01057951.1 CABZ01057951.1 10 1 1.000 - - - - - - - -
71. BX119916.1 BX119916.1 19 1 1.000 - - - - - - - -
72. soat2 ENSDARG00000059824 62 1 1.000 - - - - - - - - sterol O-acyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-061013-742]
73. CU855953.1 CU855953.1 137 1 1.000 - - - - - - - -
74. BX927064.1 BX927064.1 46 1 1.000 - - - - - - - -
75. CABZ01064671.1 ENSDARG00000039935 21 1 1.000 - - - - - - - -
76. chtopb ENSDARG00000070430 29 1 1.000 - - - - - - - - chromatin target of PRMT1b [Source:ZFIN;Acc:ZDB-GENE-061013-712]
77. FKBP15_2 FKBP15_2 40 1 1.000 - - - - - - - -
78. NCKAP1L ENSDARG00000075748 129 1 1.000 - - - - - - - - NCK associated protein 1 like [Source:HGNC Symbol;Acc:HGNC:4862]
79. ASTN2 1 1 1.000 - - - - - - - - astrotactin 2
80. ABCC6 ABCC6 5 1 1.000 - - - - - - - -
81. si:ch211-285c6.3 ENSDARG00000026505 19 1 1.000 - - - - - - - - si:ch211-285c6.3 [Source:ZFIN;Acc:ZDB-GENE-040724-148]
82. efhb ENSDARG00000069703 9 1 1.000 - - - - - - - - EF-hand domain family, member B [Source:ZFIN;Acc:ZDB-GENE-091001-1]
83. zgc:172075 ENSDARG00000076146 93 1 1.000 - - - - - - - - zgc:172075 [Source:ZFIN;Acc:ZDB-GENE-080215-3]
84. si:ch211-64c10.1 si:ch211-64c10.1 21 1 1.000 - - - - - - - -
85. cx32.3 ENSDARG00000041787 33 1 1.000 - - - - - - - - connexin 32.3 [Source:ZFIN;Acc:ZDB-GENE-030131-1337]
86. si:ch211-229l10.10 si:ch211-229l10.10 8 1 1.000 - - - - - - - -
87. illr3 ENSDARG00000018327 5 1 1.000 - - - - - - - - immune-related, lectin-like receptor 3 [Source:ZFIN;Acc:ZDB-GENE-050311-4]
88. kcnq2a ENSDARG00000075307 7 1 1.000 - - - - - - - - potassium voltage-gated channel, KQT-like subfamily, member 2a [Source:ZFIN;Acc:ZDB-GENE-080220-37]
89. illr4 ENSDARG00000008075 164 1 1.000 - - - - - - - - immune-related, lectin-like receptor 4 [Source:ZFIN;Acc:ZDB-GENE-050311-5]
90. CR556708.1 ENSDARG00000100565 6 1 1.000 - - - - - - - - uncharacterized LOC110437832 [Source:NCBI gene;Acc:110437832]
91. CR354549.1 ENSDARG00000117215 3 1 1.000 - - - - - - - -
92. ccdc11 ccdc11 79 1 1.000 - - - - - - - -
93. IQCK ENSDARG00000076831, ENSDARG00000112508 6 1 1.000 - - - - - - - - IQ motif containing K [Source:ZFIN;Acc:ZDB-GENE-081022-109]
94. rnf213b ENSDARG00000103551 63 1 1.000 - - - - - - - - ring finger protein 213b [Source:ZFIN;Acc:ZDB-GENE-110822-1]
95. fabp11b ENSDARG00000002311 354 1 1.000 - - - - - - - - fatty acid binding protein 11b [Source:ZFIN;Acc:ZDB-GENE-050522-391]
96. phf19 ENSDARG00000078050 117 1 1.000 - - - - - - - - PHD finger protein 19 [Source:ZFIN;Acc:ZDB-GENE-081105-128]
97. WDR93 ENSDARG00000087191 51 1 1.000 - - - - - - - - WD repeat domain 93 [Source:ZFIN;Acc:ZDB-GENE-161017-52]
98. chmp2ba ENSDARG00000068683, ENSDARG00000113182, ENSDARG00000114167 20 1 1.000 - - - - - - - - charged multivesicular body protein 2Ba [Source:ZFIN;Acc:ZDB-GENE-070628-3]
99. si:dkey-58f10.7_1 ENSDARG00000091972, ENSDARG00000093350 2 1 1.000 - - - - - - - - si:dkey-58f10.7 [Source:ZFIN;Acc:ZDB-GENE-060526-321]
100. eif2b5 ENSDARG00000074995 8 1 1.000 - - - - - - - - eukaryotic translation initiation factor 2B, subunit 5 epsilon [Source:ZFIN;Acc:ZDB-GENE-030131-5364]

There are 1090 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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