Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-173n18.4

Gene Name Gene ID Reads Annotation
si:ch211-173n18.4 129 si:ch211-173n18.4, transcript variant X1










Genes with expression patterns similar to si:ch211-173n18.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-173n18.4 129 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-173n18.4, transcript variant X1
2. BX004873.3 BX004873.3 59 1.952 1.000 0.952 - - - - - - -
3. PARP4 ENSDARG00000069934 70 1.919 1.000 - - - - - 0.919 - - poly (ADP-ribose) polymerase family, member 4 [Source:ZFIN;Acc:ZDB-GENE-070912-387]
4. elna 38 1.814 0.878 0.936 - - - - - - - elastin a, transcript variant X20
5. eno1b ENSDARG00000013750 63 1.786 - 0.888 - - - - 0.898 - - enolase 1b, (alpha) [Source:ZFIN;Acc:ZDB-GENE-040426-1651]
6. arhgap25 ENSDARG00000061784 112 1.751 - 0.875 - - - - 0.876 - - Rho GTPase activating protein 25 [Source:ZFIN;Acc:ZDB-GENE-060526-210]
7. slc7a9 ENSDARG00000005894 29 1.749 1.000 - - - - - - 0.749 - solute carrier family 7 (amino acid transporter light chain, bo,+ system), member 9 [Source:ZFIN;Acc:ZDB-GENE-080116-2]
8. GLIS2 GLIS2 141 1.72 0.810 - - - - - 0.910 - -
9. TMEM55B TMEM55B 76 1.671 - 0.858 - - - - 0.813 - -
10. sdccag8 ENSDARG00000078947 68 1.665 0.841 0.824 - - - - - - - serologically defined colon cancer antigen 8 [Source:ZFIN;Acc:ZDB-GENE-090313-318]
11. hoxc11b ENSDARG00000102631 808 1.662 0.953 0.709 - - - - - - - homeobox C11b [Source:ZFIN;Acc:ZDB-GENE-000822-3]
12. vasna ENSDARG00000099266, ENSDARG00000111629 488 1.599 - 0.805 - - - - 0.794 - - vasorin a [Source:ZFIN;Acc:ZDB-GENE-050522-43]
13. THEG ENSDARG00000078644 121 1.585 - 0.711 - - - - 0.874 - - theg spermatid protein [Source:ZFIN;Acc:ZDB-GENE-070912-59]
14. zbtb1 ENSDARG00000023040, ENSDARG00000112571 211 1.579 0.775 - - - - 0.804 - - - zinc finger and BTB domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041001-126]
15. KIF20B KIF20B 800 1.567 - 0.821 - - - - 0.746 - -
16. zgc:153704 ENSDARG00000045979 11 1.558 - - - - - - 0.858 - 0.700 zgc:153704 [Source:ZFIN;Acc:ZDB-GENE-060929-1114]
17. itga11b ENSDARG00000007950 17 1.546 - - - - - - 0.832 0.714 - integrin, alpha 11b [Source:ZFIN;Acc:ZDB-GENE-071009-4]
18. tsnaxip1 ENSDARG00000030512 197 1.516 0.706 0.810 - - - - - - - translin-associated factor X interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-070424-39]
19. ppp1r11 ENSDARG00000036063 587 1.501 - - - - - 0.756 0.745 - - protein phosphatase 1, regulatory (inhibitor) subunit 11 [Source:ZFIN;Acc:ZDB-GENE-050417-99]
20. USP43 USP43 14 1.473 - - - - 0.732 - - 0.741 -
21. mctp2a ENSDARG00000001414 307 1.464 - 0.752 - - - - 0.712 - - multiple C2 domains, transmembrane 2a [Source:ZFIN;Acc:ZDB-GENE-040724-63]
22. alkbh4 ENSDARG00000052247 306 1.462 - - - - - 0.714 0.748 - - alkB homolog 4, lysine demthylase [Source:ZFIN;Acc:ZDB-GENE-060526-275]
23. mapre3b ENSDARG00000102878 362 1.461 - - - - 0.733 - 0.728 - - microtubule-associated protein, RP/EB family, member 3b [Source:ZFIN;Acc:ZDB-GENE-040704-6]
24. trim2a ENSDARG00000031817 224 1.459 0.739 0.720 - - - - - - - tripartite motif containing 2a [Source:ZFIN;Acc:ZDB-GENE-050327-99]
25. itga3a ENSDARG00000037917 219 1.449 - 0.705 - - - - 0.744 - - integrin, alpha 3a [Source:ZFIN;Acc:ZDB-GENE-090805-3]
26. chd 56 1.437 0.715 - - - - 0.722 - - - chordin
27. foxn3 ENSDARG00000012833 169 1.415 - 0.704 - - - - 0.711 - - forkhead box N3 [Source:ZFIN;Acc:ZDB-GENE-060512-39]
28. pth2r ENSDARG00000006678, ENSDARG00000112414 46 1 1.000 - - - - - - - - parathyroid hormone 2 receptor [Source:ZFIN;Acc:ZDB-GENE-991123-10]
29. hal ENSDARG00000017444 11 1 1.000 - - - - - - - - histidine ammonia-lyase [Source:ZFIN;Acc:ZDB-GENE-070410-5]
30. Metazoa_SRP_6 Metazoa_SRP_6 7 1 1.000 - - - - - - - -
31. wu:fd55e03 wu:fd55e03 41 1 1.000 - - - - - - - -
32. si:dkeyp-35e5.11 si:dkeyp-35e5.11 38 1 1.000 - - - - - - - -
33. si:ch211-285c6.3 ENSDARG00000026505 19 1 1.000 - - - - - - - - si:ch211-285c6.3 [Source:ZFIN;Acc:ZDB-GENE-040724-148]
34. ENSDARG00000087581 ENSDARG00000087581 2 1 1.000 - - - - - - - -
35. si:dkey-24p1.7 ENSDARG00000089404 7 1 1.000 - - - - - - - - si:dkey-24p1.7 [Source:ZFIN;Acc:ZDB-GENE-121214-215]
36. illr3 ENSDARG00000018327 5 1 1.000 - - - - - - - - immune-related, lectin-like receptor 3 [Source:ZFIN;Acc:ZDB-GENE-050311-4]
37. tor1l1 ENSDARG00000055856 1 1 1.000 - - - - - - - - torsin family 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-080723-36]
38. CR556708.1 ENSDARG00000100565 6 1 1.000 - - - - - - - - uncharacterized LOC110437832 [Source:NCBI gene;Acc:110437832]
39. plxnc1 ENSDARG00000015278 501 1 1.000 - - - - - - - - plexin C1 [Source:ZFIN;Acc:ZDB-GENE-030131-1620]
40. si:ch211-276a17.5 ENSDARG00000096398 1 1 1.000 - - - - - - - - si:ch211-276a17.5 [Source:ZFIN;Acc:ZDB-GENE-120215-248]
41. ccdc11 ccdc11 79 1 1.000 - - - - - - - -
42. phf19 ENSDARG00000078050 117 1 1.000 - - - - - - - - PHD finger protein 19 [Source:ZFIN;Acc:ZDB-GENE-081105-128]
43. si:ch211-64c10.1 si:ch211-64c10.1 21 1 1.000 - - - - - - - -
44. cyp2k18 ENSDARG00000104593 27 1 1.000 - - - - - - - - cytochrome P450, family 2, subfamily K, polypeptide 18 [Source:ZFIN;Acc:ZDB-GENE-040426-1584]
45. si:ch211-203k16.3 ENSDARG00000069305 21 1 1.000 - - - - - - - - si:ch211-203k16.3 [Source:ZFIN;Acc:ZDB-GENE-041014-290]
46. elavl2 ENSDARG00000040732 44 1 1.000 - - - - - - - - ELAV like neuron-specific RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040704-9]
47. ADCK3 101 1 1.000 - - - - - - - - aarF domain containing kinase 3
48. st8sia7.1 ENSDARG00000054211 34 1 1.000 - - - - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 7.1 [Source:ZFIN;Acc:ZDB-GENE-090504-4]
49. NCKAP1L ENSDARG00000075748 129 1 1.000 - - - - - - - - NCK associated protein 1 like [Source:HGNC Symbol;Acc:HGNC:4862]
50. CABZ01002626.1 CABZ01002626.1 29 1 1.000 - - - - - - - -
51. pygo1 ENSDARG00000098687 4 1 1.000 - - - - - - - - pygopus family PHD finger 1 [Source:ZFIN;Acc:ZDB-GENE-080204-62]
52. zgc:103510 ENSDARG00000027699 13 1 1.000 - - - - - - - - zgc:103510 [Source:ZFIN;Acc:ZDB-GENE-041212-27]
53. zymnd12 17 1 1.000 - - - - - - - - zinc finger, MYND-type containing 12, transcript variant X1
54. CABZ01078314.1 CABZ01078314.1 44 1 1.000 - - - - - - - -
55. illr4 ENSDARG00000008075 164 1 1.000 - - - - - - - - immune-related, lectin-like receptor 4 [Source:ZFIN;Acc:ZDB-GENE-050311-5]
56. zgc:172075 ENSDARG00000076146 93 1 1.000 - - - - - - - - zgc:172075 [Source:ZFIN;Acc:ZDB-GENE-080215-3]
57. ca15b ENSDARG00000040510 5 1 1.000 - - - - - - - - carbonic anhydrase XVb [Source:ZFIN;Acc:ZDB-GENE-040426-2222]
58. cyp3c4 ENSDARG00000070021 95 1 1.000 - - - - - - - - cytochrome P450, family 3, subfamily C, polypeptide 4 [Source:ZFIN;Acc:ZDB-GENE-060929-96]
59. PAQR8 ENSDARG00000088828 26 1 1.000 - - - - - - - - progestin and adipoQ receptor family member VIII [Source:ZFIN;Acc:ZDB-GENE-030728-3]
60. kcnq2a ENSDARG00000075307 7 1 1.000 - - - - - - - - potassium voltage-gated channel, KQT-like subfamily, member 2a [Source:ZFIN;Acc:ZDB-GENE-080220-37]
61. GIGYF1_2 GIGYF1_2 22 1 1.000 - - - - - - - -
62. si:ch211-161h7.6 si:ch211-161h7.6 129 1 1.000 - - - - - - - -
63. sh2d3cb ENSDARG00000104555, ENSDARG00000116530 21 1 1.000 - - - - - - - - SH2 domain containing 3Cb [Source:ZFIN;Acc:ZDB-GENE-040426-1052]
64. si:ch211-285c6.4 ENSDARG00000095410 4 1 1.000 - - - - - - - - si:ch211-285c6.4 [Source:ZFIN;Acc:ZDB-GENE-041001-97]
65. zgc:173702_1 ENSDARG00000110229 24 1 1.000 - - - - - - - - zgc:173702 [Source:ZFIN;Acc:ZDB-GENE-080208-3]
66. asah1a ENSDARG00000037091, ENSDARG00000112187 390 1 1.000 - - - - - - - - N-acylsphingosine amidohydrolase (acid ceramidase) 1a [Source:ZFIN;Acc:ZDB-GENE-041010-191]
67. cx32.3 ENSDARG00000041787 33 1 1.000 - - - - - - - - connexin 32.3 [Source:ZFIN;Acc:ZDB-GENE-030131-1337]
68. ASTN2 1 1 1.000 - - - - - - - - astrotactin 2
69. CDH12_1 CDH12_1 57 1 1.000 - - - - - - - -
70. TMC5 ENSDARG00000013252 22 1 1.000 - - - - - - - - transmembrane channel like 5 [Source:ZFIN;Acc:ZDB-GENE-120411-6]
71. CR388416.2 CR388416.2 3 1 1.000 - - - - - - - -
72. zgc:173556 82 1 1.000 - - - - - - - - zgc:173556
73. CABZ01112215.1 CABZ01112215.1 23 1 1.000 - - - - - - - -
74. BX927064.1 BX927064.1 46 1 1.000 - - - - - - - -
75. frzb ENSDARG00000018383 93 1 1.000 - - - - - - - - frizzled related protein [Source:ZFIN;Acc:ZDB-GENE-990715-1]
76. sytl4 ENSDARG00000102433 19 1 1.000 - - - - - - - - synaptotagmin-like 4 [Source:ZFIN;Acc:ZDB-GENE-070209-217]
77. si:dkey-58f10.7_1 ENSDARG00000091972, ENSDARG00000093350 2 1 1.000 - - - - - - - - si:dkey-58f10.7 [Source:ZFIN;Acc:ZDB-GENE-060526-321]
78. eif2b5 ENSDARG00000074995 8 1 1.000 - - - - - - - - eukaryotic translation initiation factor 2B, subunit 5 epsilon [Source:ZFIN;Acc:ZDB-GENE-030131-5364]
79. cpa4 ENSDARG00000043722 16 1 1.000 - - - - - - - - carboxypeptidase A4 [Source:ZFIN;Acc:ZDB-GENE-040704-61]
80. HIST2H4A HIST2H4A 33 1 1.000 - - - - - - - -
81. atp8b3 ENSDARG00000042285 31 1 1.000 - - - - - - - - ATPase phospholipid transporting 8B3 [Source:ZFIN;Acc:ZDB-GENE-050208-424]
82. WDR93 ENSDARG00000087191 51 1 1.000 - - - - - - - - WD repeat domain 93 [Source:ZFIN;Acc:ZDB-GENE-161017-52]
83. CCDC178 4 1 1.000 - - - - - - - - coiled-coil domain containing 178, transcript variant X3
84. CU855953.1 CU855953.1 137 1 1.000 - - - - - - - -
85. socs9 ENSDARG00000101985 44 1 1.000 - - - - - - - - suppressor of cytokine signaling 9 [Source:ZFIN;Acc:ZDB-GENE-030131-4065]
86. si:dkey-39e8.5 si:dkey-39e8.5 2 1 1.000 - - - - - - - -
87. pld6 ENSDARG00000059951 17 1 1.000 - - - - - - - - phospholipase D family, member 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3825]
88. tbc1d25 ENSDARG00000075333 126 1 1.000 - - - - - - - - TBC1 domain family, member 25 [Source:ZFIN;Acc:ZDB-GENE-041111-25]
89. chtopb ENSDARG00000070430 29 1 1.000 - - - - - - - - chromatin target of PRMT1b [Source:ZFIN;Acc:ZDB-GENE-061013-712]
90. pde6a ENSDARG00000000380 40 1 1.000 - - - - - - - - phosphodiesterase 6A, cGMP-specific, rod, alpha [Source:ZFIN;Acc:ZDB-GENE-030616-42]
91. atg16l2 ENSDARG00000043238, ENSDARG00000109384 10 1 1.000 - - - - - - - - ATG16 autophagy related 16-like 2 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060503-197]
92. ENSDARG00000089100 ENSDARG00000089100 5 1 1.000 - - - - - - - -
93. IQCK ENSDARG00000076831, ENSDARG00000112508 6 1 1.000 - - - - - - - - IQ motif containing K [Source:ZFIN;Acc:ZDB-GENE-081022-109]
94. slc13a5 slc13a5 15 1 1.000 - - - - - - - -
95. erap2 ENSDARG00000098618 16 1 1.000 - - - - - - - - endoplasmic reticulum aminopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-080402-6]
96. parp12a ENSDARG00000042496 82 1 1.000 - - - - - - - - poly (ADP-ribose) polymerase family, member 12a [Source:ZFIN;Acc:ZDB-GENE-050419-6]
97. ccdc170 ENSDARG00000016161 18 1 1.000 - - - - - - - - coiled-coil domain containing 170 [Source:ZFIN;Acc:ZDB-GENE-070112-162]
98. gatsl3 7 1 1.000 - - - - - - - - GATS protein-like 3
99. slc7a1 ENSDARG00000016439, ENSDARG00000115084 32 1 1.000 - - - - - - - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 [Source:ZFIN;Acc:ZDB-GENE-091116-69]
100. rnf213b ENSDARG00000103551 63 1 1.000 - - - - - - - - ring finger protein 213b [Source:ZFIN;Acc:ZDB-GENE-110822-1]

There are 1090 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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