Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-170d8.2

Gene Name Gene ID Reads Annotation
si:ch211-170d8.2 ENSDARG00000094887 247 si:ch211-170d8.2 [Source:ZFIN;Acc:ZDB-GENE-030328-34]










Genes with expression patterns similar to si:ch211-170d8.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-170d8.2 ENSDARG00000094887 247 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-170d8.2 [Source:ZFIN;Acc:ZDB-GENE-030328-34]
2. clcn6 ENSDARG00000032577 174 1.535 - - - - - 0.716 0.819 - - chloride channel 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2056]
3. im:7160159 im:7160159 294 1.525 - - - 0.751 - - - 0.774 -
4. tmem229b ENSDARG00000060569 516 1.508 0.711 0.797 - - - - - - - transmembrane protein 229B [Source:ZFIN;Acc:ZDB-GENE-060929-1154]
5. mtap ENSDARG00000037261 610 1.488 - - - - - 0.781 0.707 - - methylthioadenosine phosphorylase [Source:ZFIN;Acc:ZDB-GENE-040426-1505]
6. sox19b ENSDARG00000040266 532 1.476 0.712 - - 0.764 - - - - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
7. atp8b1 ENSDARG00000060980 181 0.938 - - - - - - - 0.938 - ATPase phospholipid transporting 8B1 [Source:ZFIN;Acc:ZDB-GENE-091116-14]
8. pknox2 ENSDARG00000055349 784 0.923 0.923 - - - - - - - - pbx/knotted 1 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-031118-112]
9. osbpl11 ENSDARG00000076328 195 0.921 - - - - - - - 0.921 - oxysterol binding protein-like 11 [Source:ZFIN;Acc:ZDB-GENE-081105-135]
10. si:dkeyp-86h10.3 ENSDARG00000095615 253 0.918 - - - - - - - 0.918 - si:dkeyp-86h10.3 [Source:ZFIN;Acc:ZDB-GENE-100922-65]
11. sdr39u1 ENSDARG00000099617 225 0.907 - - - - - - - 0.907 - short chain dehydrogenase/reductase family 39U, member 1 [Source:ZFIN;Acc:ZDB-GENE-060929-104]
12. FP102801.1 FP102801.1 294 0.905 - - - - - - - 0.905 -
13. fbxo18 ENSDARG00000062983, ENSDARG00000113423 1458 0.897 - - - - - - - 0.897 - F-box protein helicase 1 [Source:ZFIN;Acc:ZDB-GENE-041210-99]
14. s1pr2 ENSDARG00000036548 1109 0.889 - 0.889 - - - - - - - sphingosine-1-phosphate receptor 2 [Source:ZFIN;Acc:ZDB-GENE-020123-2]
15. crabp2a ENSDARG00000073978 868 0.887 0.887 - - - - - - - - cellular retinoic acid binding protein 2, a [Source:ZFIN;Acc:ZDB-GENE-020320-4]
16. si:dkey-117n7.5 ENSDARG00000089640 452 0.885 - - - - - - - 0.885 - si:dkey-117n7.5 [Source:ZFIN;Acc:ZDB-GENE-060503-331]
17. rangrf ENSDARG00000098786 375 0.882 - - - - - - - 0.882 - RAN guanine nucleotide release factor [Source:ZFIN;Acc:ZDB-GENE-060526-143]
18. naf1 ENSDARG00000057929, ENSDARG00000110711 426 0.882 - - - - - - 0.882 - - nuclear assembly factor 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-4546]
19. C23H1orf192 C23H1orf192 60 0.877 - 0.877 - - - - - - -
20. ptpreb ENSDARG00000021151 739 0.859 - - - - - - - 0.859 - protein tyrosine phosphatase, receptor type, E, b [Source:ZFIN;Acc:ZDB-GENE-060503-263]
21. rnmtl1a 112 0.852 0.852 - - - - - - - - RNA methyltransferase like 1a
22. dhodh ENSDARG00000051889 401 0.851 - 0.851 - - - - - - - dihydroorotate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-3157]
23. her8.2 ENSDARG00000069675 315 0.85 0.850 - - - - - - - - hairy-related 8.2 [Source:ZFIN;Acc:ZDB-GENE-060815-4]
24. znf804a ENSDARG00000027079 121 0.85 0.850 - - - - - - - - zinc finger protein 804A [Source:ZFIN;Acc:ZDB-GENE-070912-632]
25. maml3 ENSDARG00000079552 357 0.849 - - - - - - - 0.849 - mastermind-like transcriptional coactivator 3 [Source:ZFIN;Acc:ZDB-GENE-090313-292]
26. srek1 ENSDARG00000009764, ENSDARG00000114600 319 0.845 - - - - - - - 0.845 - splicing regulatory glutamine/lysine-rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-040801-132]
27. hars2 hars2 1104 0.843 - - - - - - - 0.843 -
28. colq ENSDARG00000019692 656 0.84 - - - - - - - 0.840 - collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase [Source:ZFIN;Acc:ZDB-GENE-110411-119]
29. SRPK2 446 0.838 0.838 - - - - - - - - SRSF protein kinase 2, transcript variant X4
30. syt11b ENSDARG00000056105 578 0.838 0.838 - - - - - - - - synaptotagmin XIb [Source:ZFIN;Acc:ZDB-GENE-090601-7]
31. irs4a ENSDARG00000086551 346 0.837 - - - - - - 0.837 - - insulin receptor substrate 4a [Source:ZFIN;Acc:ZDB-GENE-120215-92]
32. tnni2a.2 ENSDARG00000005841 483 0.837 - - - - - - - 0.837 - troponin I type 2a (skeletal, fast), tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040426-970]
33. TSTD1 TSTD1 608 0.834 - - - - - - - 0.834 -
34. xpc ENSDARG00000039754 515 0.833 - - - - - 0.833 - - - xeroderma pigmentosum, complementation group C [Source:ZFIN;Acc:ZDB-GENE-030131-8461]
35. zgc:113295 ENSDARG00000074768, ENSDARG00000103947 36 0.832 - 0.832 - - - - - - - zgc:113295 [Source:ZFIN;Acc:ZDB-GENE-050320-122]
36. ASTL ASTL 24 0.832 - - - - - - - 0.832 -
37. hiat1b ENSDARG00000043055 757 0.831 - - - - - - 0.831 - - hippocampus abundant transcript 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2935]
38. cacng2a ENSDARG00000032565 99 0.83 0.830 - - - - - - - - calcium channel, voltage-dependent, gamma subunit 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1401]
39. bend3 ENSDARG00000076903 320 0.83 0.830 - - - - - - - - BEN domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-090312-181]
40. shrprbck1r ENSDARG00000059871 362 0.83 - - - - - - - 0.830 - sharpin and rbck1 related [Source:ZFIN;Acc:ZDB-GENE-080220-52]
41. si:dkey-122c11.9 si:dkey-122c11.9 227 0.827 - - - - - - 0.827 - -
42. frmd4bb ENSDARG00000076496 18 0.827 - - - - - - - 0.827 - FERM domain containing 4Bb [Source:ZFIN;Acc:ZDB-GENE-100921-74]
43. arsh ENSDARG00000002299 331 0.827 - 0.827 - - - - - - - arylsulfatase H [Source:ZFIN;Acc:ZDB-GENE-081104-120]
44. SDSL ENSDARG00000074698 34 0.826 - - - - - - 0.826 - - serine dehydratase-like [Source:ZFIN;Acc:ZDB-GENE-131121-410]
45. map4k3a ENSDARG00000087742 771 0.825 - 0.825 - - - - - - - mitogen-activated protein kinase kinase kinase kinase 3a [Source:ZFIN;Acc:ZDB-GENE-130329-1]
46. d2hgdh ENSDARG00000060210 362 0.825 - - - - - - - 0.825 - D-2-hydroxyglutarate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-070112-482]
47. nkx2.9 ENSDARG00000020332 357 0.823 - - - - - - - 0.823 - NK2 transcription factor related, locus 9 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-4340]
48. map1aa ENSDARG00000059601 599 0.821 0.821 - - - - - - - - microtubule-associated protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-100426-2]
49. creg2 ENSDARG00000000666 643 0.82 - 0.820 - - - - - - - cellular repressor of E1A-stimulated genes 2 [Source:ZFIN;Acc:ZDB-GENE-041114-173]
50. si:dkey-14d8.2 38 0.818 - - - - - - - 0.818 - si:dkey-14d8.2
51. B4GALNT1 B4GALNT1 352 0.818 - - - - - - 0.818 - -
52. CCDC134_1 CCDC134_1 200 0.817 - 0.817 - - - - - - -
53. fmnl2a ENSDARG00000012586 136 0.817 - - - - - - 0.817 - - formin-like 2a [Source:ZFIN;Acc:ZDB-GENE-081105-70]
54. hbs1l ENSDARG00000036778, ENSDARG00000115090 130 0.817 - - - - - - - 0.817 - HBS1-like translational GTPase [Source:ZFIN;Acc:ZDB-GENE-030131-2987]
55. traf1 ENSDARG00000069482 50 0.817 - - - - - - - 0.817 - TNF receptor-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-4]
56. ap4e1 ENSDARG00000103684 171 0.816 - - - - - 0.816 - - - adaptor related protein complex 4 subunit epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-061221-3]
57. IQUB ENSDARG00000061899 91 0.816 - - - - - 0.816 - - - IQ motif and ubiquitin domain containing [Source:ZFIN;Acc:ZDB-GENE-110421-1]
58. MRAS_1 ENSDARG00000075285 318 0.813 - 0.813 - - - - - - - muscle RAS oncogene homolog [Source:HGNC Symbol;Acc:HGNC:7227]
59. smyd3 ENSDARG00000058050 69 0.813 - - - - - - - 0.813 - SET and MYND domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-051120-138]
60. CABZ01086801.1 CABZ01086801.1 41 0.812 - - - - - - - 0.812 -
61. sept5b ENSDARG00000036031 188 0.812 0.812 - - - - - - - - septin 5b [Source:ZFIN;Acc:ZDB-GENE-040808-43]
62. BX000701.2 ENSDARG00000105074 1123 0.812 - 0.812 - - - - - - - gastrula zinc finger protein XlCGF7.1-like [Source:NCBI gene;Acc:101884528]
63. WBP1 ENSDARG00000098583 64 0.812 0.812 - - - - - - - - WW domain binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1830]
64. BX664622.3 BX664622.3 42 0.811 - - - - - 0.811 - - -
65. rasa1b ENSDARG00000073665 397 0.811 - 0.811 - - - - - - - RAS p21 protein activator (GTPase activating protein) 1b [Source:ZFIN;Acc:ZDB-GENE-090311-50]
66. RNF115 ENSDARG00000062450 83 0.811 - - - - - - - 0.811 - ring finger protein 115 [Source:ZFIN;Acc:ZDB-GENE-061215-82]
67. zgc:113294 ENSDARG00000032285 132 0.81 - - - - - - - 0.810 - zgc:113294 [Source:ZFIN;Acc:ZDB-GENE-050320-124]
68. chid1 ENSDARG00000069673 675 0.81 - 0.810 - - - - - - - chitinase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9169]
69. ADAM22 ENSDARG00000060532 2259 0.809 - 0.809 - - - - - - - ADAM metallopeptidase domain 22 [Source:ZFIN;Acc:ZDB-GENE-070810-1]
70. crfb17 511 0.809 - - - - - - - 0.809 - cytokine receptor family member B17
71. trpv4 ENSDARG00000061941 297 0.808 - - - - - - - 0.808 - transient receptor potential cation channel, subfamily V, member 4 [Source:ZFIN;Acc:ZDB-GENE-030912-7]
72. POLRMT ENSDARG00000101220 215 0.807 - - - - - - - 0.807 - polymerase (RNA) mitochondrial (DNA directed) [Source:ZFIN;Acc:ZDB-GENE-030131-1528]
73. btc ENSDARG00000098112, ENSDARG00000110368 333 0.807 - - - - - - - 0.807 - betacellulin, epidermal growth factor family member [Source:ZFIN;Acc:ZDB-GENE-050311-1]
74. EPC1 EPC1 500 0.807 - - - - - 0.807 - - -
75. TXNDC16 ENSDARG00000032256 231 0.806 - 0.806 - - - - - - - thioredoxin domain containing 16 [Source:ZFIN;Acc:ZDB-GENE-100712-1]
76. FBXO48 ENSDARG00000086184 110 0.805 - - - - - 0.805 - - - F-box protein 48 [Source:HGNC Symbol;Acc:HGNC:33857]
77. C13H6orf203 C13H6orf203 881 0.805 - - - - - 0.805 - - -
78. ccdc11 ccdc11 79 0.805 - - - 0.805 - - - - -
79. DOCK4 DOCK4 78 0.804 - - - - - 0.804 - - -
80. scn2b ENSDARG00000101713 796 0.804 0.804 - - - - - - - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
81. NGFR NGFR 186 0.804 - - - - - - - 0.804 -
82. dusp5 ENSDARG00000019307, ENSDARG00000110831 476 0.804 - - - - - - - 0.804 - dual specificity phosphatase 5 [Source:ZFIN;Acc:ZDB-GENE-010625-1]
83. BX005008.2 BX005008.2 708 0.804 - - - - - 0.804 - - -
84. COX18 ENSDARG00000102463 602 0.803 - 0.803 - - - - - - - cytochrome c oxidase assembly factor COX18 [Source:ZFIN;Acc:ZDB-GENE-080204-88]
85. rsrc1 ENSDARG00000033987 552 0.803 - - - - - - - 0.803 - arginine/serine-rich coiled-coil 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2374]
86. cyp2k8 ENSDARG00000101190 69 0.803 - - - - - - - 0.803 - cytochrome P450, family 2, subfamily K, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-080721-19]
87. slka ENSDARG00000061525 1678 0.802 - - - - - - 0.802 - - STE20-like kinase a [Source:ZFIN;Acc:ZDB-GENE-050411-66]
88. SLC27A2_1 SLC27A2_1 974 0.802 - - - - - - 0.802 - -
89. atp1a3a ENSDARG00000018259 5393 0.802 0.802 - - - - - - - - ATPase Na+/K+ transporting subunit alpha 3a [Source:ZFIN;Acc:ZDB-GENE-001212-7]
90. wdr45 ENSDARG00000090219 829 0.802 - - - - - - 0.802 - - WD repeat domain 45 [Source:ZFIN;Acc:ZDB-GENE-040426-990]
91. ZPLXDC2 ZPLXDC2 1298 0.801 - - - 0.801 - - - - -
92. phyhipla ENSDARG00000003998, ENSDARG00000115785 262 0.801 0.801 - - - - - - - - phytanoyl-CoA 2-hydroxylase interacting protein-like a [Source:ZFIN;Acc:ZDB-GENE-061215-64]
93. usp44 ENSDARG00000089861 1532 0.801 - 0.801 - - - - - - - ubiquitin specific peptidase 44 [Source:ZFIN;Acc:ZDB-GENE-040426-774]
94. armc1 ENSDARG00000013861 175 0.801 - - - - - - 0.801 - - armadillo repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-041212-33]
95. cbx4 ENSDARG00000099441 372 0.8 - 0.800 - - - - - - - chromobox homolog 4 (Pc class homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040329-2]
96. NEDD9 ENSDARG00000089878, ENSDARG00000116312 165 0.8 - - - - - 0.800 - - - neural precursor cell expressed, developmentally down-regulated 9 [Source:ZFIN;Acc:ZDB-GENE-061013-318]
97. anapc1 ENSDARG00000075687 488 0.8 - - - - - - 0.800 - - anaphase promoting complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-081107-12]
98. si:ch211-39k3.2 ENSDARG00000075881 531 0.8 - - - - - - - 0.800 - si:ch211-39k3.2 [Source:ZFIN;Acc:ZDB-GENE-070705-180]
99. cd40 ENSDARG00000054968 90 0.8 - - - - - - - 0.800 - CD40 molecule, TNF receptor superfamily member 5 [Source:ZFIN;Acc:ZDB-GENE-090313-95]
100. tnfrsf19 ENSDARG00000041869 796 0.799 - - - - - - - 0.799 - tumor necrosis factor receptor superfamily, member 19 [Source:ZFIN;Acc:ZDB-GENE-030131-6760]

There are 456 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA