Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-170d12.2

Gene Name Gene ID Reads Annotation
si:ch211-170d12.2 si:ch211-170d12.2 1










Genes with expression patterns similar to si:ch211-170d12.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-170d12.2 si:ch211-170d12.2 1 3 1.000 - - 1.000 1.000 - - - -
2. CCDC18 ENSDARG00000078822 5 2 1.000 - - 1.000 - - - - - coiled-coil domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-030131-5414]
3. ETS1 ENSDARG00000024431 6 2 1.000 - - - 1.000 - - - - v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:ZFIN;Acc:ZDB-GENE-021115-5]
4. C5AR1 1 2 - - - 1.000 1.000 - - - - C5a anaphylatoxin chemotactic receptor
5. col28a1 col28a1 5 2 1.000 - - - 1.000 - - - -
6. irgq2 ENSDARG00000068657 4 2 1.000 - - - 1.000 - - - - immunity-related GTPase family, q2 [Source:ZFIN;Acc:ZDB-GENE-051212-7]
7. si:ch211-10p21.1 si:ch211-10p21.1 6 2 1.000 - - - 1.000 - - - -
8. SRCIN1_1 SRCIN1_1 11 1.942 - - - 1.000 0.942 - - - -
9. ARHGAP17 ARHGAP17 29 1.897 1.000 - - - 0.897 - - - -
10. rtn4rl2a ENSDARG00000052012 5 1.835 - - - 0.835 1.000 - - - - reticulon 4 receptor-like 2 a [Source:ZFIN;Acc:ZDB-GENE-040310-4]
11. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 1.825 1.000 - - 0.825 - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
12. adam10b ENSDARG00000015502 26 1.757 1.000 - - - 0.757 - - - - ADAM metallopeptidase domain 10b [Source:ZFIN;Acc:ZDB-GENE-071115-1]
13. ssh1b ENSDARG00000010031 4 1.72 1.000 - - 0.720 - - - - - slingshot protein phosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5909]
14. nrxn3a ENSDARG00000043746 54 1.553 - - - 0.800 0.753 - - - - neurexin 3a [Source:ZFIN;Acc:ZDB-GENE-070206-9]
15. pag1 ENSDARG00000055875 21 1.534 - - - 0.801 0.733 - - - - phosphoprotein membrane anchor with glycosphingolipid microdomains 1 [Source:ZFIN;Acc:ZDB-GENE-060503-586]
16. FP565458.1 FP565458.1 61 1 1.000 - - - - - - - -
17. anks1aa ENSDARG00000062396 1 1 1.000 - - - - - - - - ankyrin repeat and sterile alpha motif domain containing 1Aa [Source:ZFIN;Acc:ZDB-GENE-090312-152]
18. fam163b ENSDARG00000073914 46 1 1.000 - - - - - - - - family with sequence similarity 163, member B [Source:ZFIN;Acc:ZDB-GENE-091204-96]
19. opn4a ENSDARG00000022098, ENSDARG00000110010 3 1 - - - 1.000 - - - - - opsin 4a (melanopsin) [Source:ZFIN;Acc:ZDB-GENE-070111-2]
20. zgc:153157 ENSDARG00000070423, ENSDARG00000115488 79 1 1.000 - - - - - - - - zgc:153157 [Source:ZFIN;Acc:ZDB-GENE-060825-224]
21. cdc73 ENSDARG00000020201 22 1 1.000 - - - - - - - - cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1309]
22. zgc:113274 ENSDARG00000059235, ENSDARG00000116981 19 1 1.000 - - - - - - - - zgc:113274 [Source:ZFIN;Acc:ZDB-GENE-050508-2]
23. scn4bb ENSDARG00000060319, ENSDARG00000112427 63 1 1.000 - - - - - - - - sodium channel, voltage-gated, type IV, beta b [Source:ZFIN;Acc:ZDB-GENE-031116-71]
24. THBS1_1 THBS1_1 6 1 - - - - 1.000 - - - -
25. SLC39A8 ENSDARG00000056757 52 1 1.000 - - - - - - - - solute carrier family 39 (zinc transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-050419-124]
26. si:ch211-13o20.1 si:ch211-13o20.1 30 1 1.000 - - - - - - - -
27. BX119910.6 BX119910.6 11 1 1.000 - - - - - - - -
28. si:dkey-78k11.4 ENSDARG00000094399 13 1 - - - - 1.000 - - - - si:dkey-78k11.4 [Source:ZFIN;Acc:ZDB-GENE-060503-740]
29. erc1a ENSDARG00000009941, ENSDARG00000110965 7 1 1.000 - - - - - - - - ELKS/RAB6-interacting/CAST family member 1a [Source:ZFIN;Acc:ZDB-GENE-091214-5]
30. ppid_1 ENSDARG00000038835 4 1 1.000 - - - - - - - - peptidylprolyl isomerase D [Source:ZFIN;Acc:ZDB-GENE-040625-34]
31. si:dkey-177p2.15p si:dkey-177p2.15p 20 1 1.000 - - - - - - - -
32. si:ch211-255l14.3 si:ch211-255l14.3 2 1 - - - 1.000 - - - - -
33. or111-3 ENSDARG00000086633 1 1 - - - - 1.000 - - - - odorant receptor, family D, subfamily 111, member 3 [Source:ZFIN;Acc:ZDB-GENE-010308-17]
34. si:dkeyp-82d1.2 si:dkeyp-82d1.2 11 1 1.000 - - - - - - - -
35. si:dkey-199m13.6 si:dkey-199m13.6 53 1 1.000 - - - - - - - -
36. myo5ab ENSDARG00000025218 14 1 1.000 - - - - - - - - myosin VAb [Source:ZFIN;Acc:ZDB-GENE-050411-72]
37. PCMTD2 ENSDARG00000053820, ENSDARG00000113456 25 1 1.000 - - - - - - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060312-14]
38. Metazoa_SRP_23 Metazoa_SRP_23 3 1 1.000 - - - - - - - -
39. CABZ01079304.1 CABZ01079304.1 7 1 1.000 - - - - - - - -
40. F2RL3 ENSDARG00000079399 29 1 1.000 - - - - - - - - F2R like thrombin or trypsin receptor 3 [Source:HGNC Symbol;Acc:HGNC:3540]
41. sod3b ENSDARG00000079183 39 1 1.000 - - - - - - - - superoxide dismutase 3, extracellular b [Source:ZFIN;Acc:ZDB-GENE-030131-8743]
42. FAM177A1 ENSDARG00000079636 19 1 1.000 - - - - - - - - family with sequence similarity 177, member A1 [Source:ZFIN;Acc:ZDB-GENE-070928-21]
43. AL935186.2 ENSDARG00000097345 6 1 1.000 - - - - - - - -
44. BX470083.4 ENSDARG00000115059 8 1 - - - 1.000 - - - - -
45. si:ch211-122i22.6 si:ch211-122i22.6 1 1 1.000 - - - - - - - -
46. cmlc1 ENSDARG00000032976 455 1 1.000 - - - - - - - - cardiac myosin light chain-1 [Source:ZFIN;Acc:ZDB-GENE-030522-1]
47. bmpr2b ENSDARG00000020057 8 1 1.000 - - - - - - - - bone morphogenetic protein receptor, type II b (serine/threonine kinase) [Source:ZFIN;Acc:ZDB-GENE-070618-2]
48. lcp2b ENSDARG00000036215 15 1 - - - 1.000 - - - - - lymphocyte cytosolic protein 2b [Source:ZFIN;Acc:ZDB-GENE-081107-21]
49. ddrgk1 ENSDARG00000037172 14 1 - - - 1.000 - - - - - DDRGK domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1050]
50. tob1a ENSDARG00000032619 3 1 1.000 - - - - - - - - transducer of ERBB2, 1a [Source:ZFIN;Acc:ZDB-GENE-031030-4]
51. ucp3 ENSDARG00000091209 137 1 1.000 - - - - - - - - uncoupling protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1317]
52. stoml3b ENSDARG00000057035 15 1 - - - - 1.000 - - - - stomatin (EPB72)-like 3b [Source:ZFIN;Acc:ZDB-GENE-050417-366]
53. GPR116_3 GPR116_3 9 1 1.000 - - - - - - - -
54. sult2st3 ENSDARG00000028367 79 1 1.000 - - - - - - - - sulfotransferase family 2, cytosolic sulfotransferase 3 [Source:ZFIN;Acc:ZDB-GENE-061117-4]
55. zgc:174700_1 zgc:174700_1 60 1 1.000 - - - - - - - -
56. ela2 ENSDARG00000056744, ENSDARG00000111667 73 1 1.000 - - - - - - - - elastase 2 [Source:ZFIN;Acc:ZDB-GENE-041117-1]
57. dmbx1a ENSDARG00000009922 284 1 1.000 - - - - - - - - diencephalon/mesencephalon homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-020117-1]
58. URB1 ENSDARG00000060308 78 1 1.000 - - - - - - - - URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5181]
59. ENSDARG00000090360 ENSDARG00000090360 0 1 - - - - 1.000 - - - -
60. katna1 ENSDARG00000021827 221 1 1.000 - - - - - - - - katanin p60 (ATPase containing) subunit A 1 [Source:ZFIN;Acc:ZDB-GENE-050522-514]
61. SNORA81_1 SNORA81_1 8 1 1.000 - - - - - - - -
62. itga2.2 ENSDARG00000062974 27 1 1.000 - - - - - - - - integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor), tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-091118-70]
63. mrc1b ENSDARG00000038822 73 1 1.000 - - - - - - - - mannose receptor, C type 1b [Source:ZFIN;Acc:ZDB-GENE-070705-13]
64. CABZ01076534.1 CABZ01076534.1 1 1 1.000 - - - - - - - -
65. vmhcl 119 1 1.000 - - - - - - - - ventricular myosin heavy chain-like
66. 5S_rRNA_10 5S_rRNA_10 2 1 1.000 - - - - - - - -
67. si:ch1073-162e11.2 si:ch1073-162e11.2 5 1 - - - - 1.000 - - - -
68. si:dkey-13a21.4 ENSDARG00000026098, ENSDARG00000113692 87 1 1.000 - - - - - - - - si:dkey-13a21.4 [Source:ZFIN;Acc:ZDB-GENE-040724-163]
69. BX323854.3 BX323854.3 62 1 1.000 - - - - - - - -
70. slc26a3 slc26a3 0 1 - - - - 1.000 - - - -
71. cysltr1 ENSDARG00000058246, ENSDARG00000116295 25 1 1.000 - - - - - - - - cysteinyl leukotriene receptor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-250]
72. cfhl5 ENSDARG00000105052 25 1 1.000 - - - - - - - - complement factor H like 5 [Source:ZFIN;Acc:ZDB-GENE-050208-782]
73. BX000701.3 BX000701.3 4 1 1.000 - - - - - - - -
74. KLHL38 KLHL38 15 1 1.000 - - - - - - - -
75. slc34a1b ENSDARG00000054658 1 1 - - - - 1.000 - - - - solute carrier family 34 (type II sodium/phosphate cotransporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-101006-4]
76. ASPG ENSDARG00000052942 1 1 1.000 - - - - - - - - asparaginase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-070820-14]
77. si:ch211-198m1.1 ENSDARG00000093192 0 1 - - - 1.000 - - - - - si:ch211-198m1.1 [Source:ZFIN;Acc:ZDB-GENE-091204-181]
78. si:dkey-26g8.9 si:dkey-26g8.9 2 1 1.000 - - - - - - - -
79. si:ch211-121j5.4 ENSDARG00000097160 0 1 - - - - 1.000 - - - - si:ch211-121j5.4 [Source:ZFIN;Acc:ZDB-GENE-070912-29]
80. mei4 ENSDARG00000043912 10 1 1.000 - - - - - - - - meiosis-specific, MEI4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040724-211]
81. slc6a6b ENSDARG00000098438 7 1 1.000 - - - - - - - - solute carrier family 6 (neurotransmitter transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030131-3077]
82. CU694385.1 CU694385.1 1 1 1.000 - - - - - - - -
83. arl8 ENSDARG00000094709 6 1 1.000 - - - - - - - - ADP-ribosylation factor-like 8 [Source:ZFIN;Acc:ZDB-GENE-030131-5762]
84. CREM_1 CREM_1 9 1 1.000 - - - - - - - -
85. si:dkey-217m5.3 si:dkey-217m5.3 22 1 1.000 - - - - - - - -
86. FAM150A 14 1 1.000 - - - - - - - - family with sequence similarity 150 member A, transcript variant X2
87. si:dkey-30j22.5 si:dkey-30j22.5 2 1 - - - - 1.000 - - - -
88. AL935184.1 ENSDARG00000070039 1 1 1.000 - - - - - - - -
89. ubxn10 ENSDARG00000052535 24 1 1.000 - - - - - - - - UBX domain protein 10 [Source:ZFIN;Acc:ZDB-GENE-060825-319]
90. s1pr4 ENSDARG00000074851 4 1 - - - 1.000 - - - - - sphingosine-1-phosphate receptor 4 [Source:ZFIN;Acc:ZDB-GENE-050506-8]
91. ENSDARG00000095511 ENSDARG00000095511 0 1 - - - - 1.000 - - - -
92. si:ch211-234c11.3_1 ENSDARG00000093615 10 1 1.000 - - - - - - - - si:ch211-234c11.3 [Source:ZFIN;Acc:ZDB-GENE-110914-93]
93. si:dkey-157e10.5 si:dkey-157e10.5 1 1 1.000 - - - - - - - -
94. zgc:112966_1 ENSDARG00000095369, ENSDARG00000099057, ENSDARG00000101612 16 1 1.000 - - - - - - - - zgc:112966 [Source:ZFIN;Acc:ZDB-GENE-050320-137]
95. GLB1L2 ENSDARG00000034941 74 1 1.000 - - - - - - - - galactosidase beta 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25129]
96. fscn2a ENSDARG00000059574 2 1 - - - 1.000 - - - - - fascin actin-bundling protein 2a, retinal [Source:ZFIN;Acc:ZDB-GENE-110901-1]
97. cx45.6 cx45.6 26 1 1.000 - - - - - - - -
98. PLCG2 ENSDARG00000068763 11 1 1.000 - - - - - - - - phospholipase C, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9532]
99. lyve1b ENSDARG00000062483 14 1 1.000 - - - - - - - - lymphatic vessel endothelial hyaluronic receptor 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9516]
100. TRIM14_8 TRIM14_8 5 1 - - - 1.000 - - - - -

There are 386 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA