Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-163m16.2

Gene Name Gene ID Reads Annotation
si:ch211-163m16.2 si:ch211-163m16.2 1










Genes with expression patterns similar to si:ch211-163m16.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-163m16.2 si:ch211-163m16.2 1 3 - - 1.000 - 1.000 - - 1.000 -
2. si:dkey-2j6.2 si:dkey-2j6.2 5 1.975 - - 1.000 - 0.975 - - - -
3. tacr2 ENSDARG00000074509, ENSDARG00000109849, ENSDARG00000112566 4 1 - - - - 1.000 - - - - tachykinin receptor 2 [Source:ZFIN;Acc:ZDB-GENE-090312-188]
4. ENSDARG00000090360 ENSDARG00000090360 0 1 - - - - 1.000 - - - -
5. RBBP6_3 RBBP6_3 34 1 - - 1.000 - - - - - -
6. si:dkeyp-69b9.4 si:dkeyp-69b9.4 0 1 - - 1.000 - - - - - -
7. pth1b ENSDARG00000091961, ENSDARG00000115353 5 1 - - 1.000 - - - - - - parathyroid hormone 1b [Source:ZFIN;Acc:ZDB-GENE-040623-2]
8. BMP10 ENSDARG00000061769 3 1 - - 1.000 - - - - - - bone morphogenetic protein 10 [Source:ZFIN;Acc:ZDB-GENE-060526-211]
9. si:ch73-167f18.4 si:ch73-167f18.4 9 1 - - 1.000 - - - - - -
10. si:dkey-106l3.6 0 1 - - 1.000 - - - - - - si:dkey-106l3.6
11. fbn2a ENSDARG00000051896 2 1 - - 1.000 - - - - - - fibrillin 2a [Source:ZFIN;Acc:ZDB-GENE-090112-4]
12. st3gal1l2 2 1 - - - - - - - 1.000 - ST3 beta-galactoside alpha-2,3-sialyltransferase 1, like 2, transcript variant X2
13. si:dkey-119p2.1 si:dkey-119p2.1 1 1 - - - - 1.000 - - - -
14. lim2.5 ENSDARG00000041295 56 1 - - 1.000 - - - - - - lens intrinsic membrane protein 2.5 [Source:ZFIN;Acc:ZDB-GENE-050320-94]
15. irak3 ENSDARG00000053131 16 1 - - - - 1.000 - - - - interleukin-1 receptor-associated kinase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-710]
16. crygm2d9 ENSDARG00000115701 28 1 - - 1.000 - - - - - - crystallin, gamma M2d9 [Source:ZFIN;Acc:ZDB-GENE-081105-81]
17. si:ch211-121j5.4 ENSDARG00000097160 0 1 - - - - 1.000 - - - - si:ch211-121j5.4 [Source:ZFIN;Acc:ZDB-GENE-070912-29]
18. slc34a1b ENSDARG00000054658 1 1 - - - - 1.000 - - - - solute carrier family 34 (type II sodium/phosphate cotransporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-101006-4]
19. ENSDARG00000095511 ENSDARG00000095511 0 1 - - - - 1.000 - - - -
20. si:ch211-170d12.2 si:ch211-170d12.2 1 1 - - - - 1.000 - - - -
21. gria1b ENSDARG00000032714, ENSDARG00000111658 12 1 - - - - 1.000 - - - - glutamate receptor, ionotropic, AMPA 1b [Source:ZFIN;Acc:ZDB-GENE-020125-2]
22. rtn4rl2a ENSDARG00000052012 5 1 - - - - 1.000 - - - - reticulon 4 receptor-like 2 a [Source:ZFIN;Acc:ZDB-GENE-040310-4]
23. il12bb ENSDARG00000054542 6 1 - - - - 1.000 - - - - interleukin 12B, b [Source:ZFIN;Acc:ZDB-GENE-030131-7937]
24. flnb ENSDARG00000092281 10 1 - - 1.000 - - - - - - filamin B, beta (actin binding protein 278) [Source:ZFIN;Acc:ZDB-GENE-041026-1]
25. hfm1 ENSDARG00000104288 9 1 - - 1.000 - - - - - - HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-061207-43]
26. or111-3 ENSDARG00000086633 1 1 - - - - 1.000 - - - - odorant receptor, family D, subfamily 111, member 3 [Source:ZFIN;Acc:ZDB-GENE-010308-17]
27. BX000348.1 BX000348.1 2 1 - - 1.000 - - - - - -
28. si:dkey-237i9.8 ENSDARG00000103020 3 1 - - 1.000 - - - - - - si:dkey-237i9.8 [Source:ZFIN;Acc:ZDB-GENE-120215-145]
29. zbtb16a ENSDARG00000007184 6 1 - - 1.000 - - - - - - zinc finger and BTB domain containing 16a [Source:ZFIN;Acc:ZDB-GENE-030131-1989]
30. si:dkey-21c19.4 si:dkey-21c19.4 1 1 - - - - - - - 1.000 -
31. col28a1 col28a1 5 1 - - - - 1.000 - - - -
32. si:ch211-10p21.1 si:ch211-10p21.1 6 1 - - - - 1.000 - - - -
33. itgb8 ENSDARG00000028222 2 1 - - - - - - - 1.000 - integrin, beta 8 [Source:ZFIN;Acc:ZDB-GENE-071213-3]
34. si:dkey-71p21.13 ENSDARG00000076139 1 1 - - - - 1.000 - - - - si:dkey-71p21.13 [Source:ZFIN;Acc:ZDB-GENE-090313-327]
35. slc25a19 ENSDARG00000100385 2 1 - - - - - - - 1.000 - solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19 [Source:ZFIN;Acc:ZDB-GENE-050417-292]
36. ddb1_1 ENSDARG00000074431 2 1 - - - - 1.000 - - - - damage-specific DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1272]
37. BX649431.1 ENSDARG00000098522 13 1 - - 1.000 - - - - - -
38. mipol1 ENSDARG00000104845 6 1 - - - - - - - 1.000 - mirror-image polydactyly 1 [Source:ZFIN;Acc:ZDB-GENE-030131-41]
39. gcdhl gcdhl 38 1 - - - - 1.000 - - - -
40. prodha ENSDARG00000086746 10 1 - - - - 1.000 - - - - proline dehydrogenase (oxidase) 1a [Source:ZFIN;Acc:ZDB-GENE-041008-73]
41. zmat4a ENSDARG00000092987, ENSDARG00000111611 1 1 - - 1.000 - - - - - - zinc finger, matrin-type 4a [Source:ZFIN;Acc:ZDB-GENE-081104-333]
42. wibg wibg 2 1 - - 1.000 - - - - - -
43. BX324215.4 BX324215.4 3 1 - - - - 1.000 - - - -
44. sycp2 ENSDARG00000088950 3 1 - - - - 1.000 - - - - synaptonemal complex protein 2 [Source:ZFIN;Acc:ZDB-GENE-090313-237]
45. PLCXD1_2 PLCXD1_2 9 1 - - 1.000 - - - - - -
46. BX255935.2 BX255935.2 0 1 - - 1.000 - - - - - -
47. CABZ01021538.1 CABZ01021538.1 67 1 - - - - 1.000 - - - -
48. BX936443.2 BX936443.2 28 1 - - - - 1.000 - - - -
49. sycp1 ENSDARG00000003904 8 1 - - - - - - - 1.000 - synaptonemal complex protein 1 [Source:ZFIN;Acc:ZDB-GENE-040910-6]
50. si:dkey-233e3.2 3 1 - - 1.000 - - - - - - si:dkey-233e3.2, transcript variant X1
51. scn1a_1 2 1 - - 1.000 - - - - - - sodium channel, voltage-gated, type I, alpha, transcript variant X1
52. si:ch211-259i2.2 si:ch211-259i2.2 45 1 - - - - 1.000 - - - -
53. si:dkey-78k11.4 ENSDARG00000094399 13 1 - - - - 1.000 - - - - si:dkey-78k11.4 [Source:ZFIN;Acc:ZDB-GENE-060503-740]
54. kiss2 ENSDARG00000077985 2 1 - - 1.000 - - - - - - kisspeptin 2 [Source:ZFIN;Acc:ZDB-GENE-090526-1]
55. slc34a2a ENSDARG00000012903 0 1 - - - - 1.000 - - - - solute carrier family 34 (type II sodium/phosphate cotransporter), member 2a [Source:ZFIN;Acc:ZDB-GENE-000524-1]
56. si:ch1073-162e11.2 si:ch1073-162e11.2 5 1 - - - - 1.000 - - - -
57. si:dkeyp-72g6.3 si:dkeyp-72g6.3 2 1 - - 1.000 - - - - - -
58. ATXN1L ENSDARG00000086977 4 1 - - 1.000 - - - - - - ataxin 1-like [Source:ZFIN;Acc:ZDB-GENE-090908-1]
59. cnn1a ENSDARG00000017193 6 1 - - 1.000 - - - - - - calponin 1, basic, smooth muscle, a [Source:ZFIN;Acc:ZDB-GENE-090312-141]
60. crygm2d7 ENSDARG00000076572, ENSDARG00000116634 229 1 - - 1.000 - - - - - - crystallin, gamma M2d7 [Source:ZFIN;Acc:ZDB-GENE-060918-5]
61. zgc:158654 19 1 - - - - 1.000 - - - - zgc:158654, transcript variant X1
62. si:dkey-58f10.4 ENSDARG00000094820 3 1 - - - - 1.000 - - - - si:dkey-58f10.4 [Source:ZFIN;Acc:ZDB-GENE-060526-318]
63. BX005356.3 BX005356.3 4 1 - - 1.000 - - - - - -
64. hcrt ENSDARG00000070932 4 1 - - - - 1.000 - - - - hypocretin (orexin) neuropeptide precursor [Source:ZFIN;Acc:ZDB-GENE-040324-1]
65. mrap ENSDARG00000091992 9 1 - - 1.000 - - - - - - melanocortin 2 receptor accessory protein [Source:ZFIN;Acc:ZDB-GENE-060503-387]
66. sult3st2 ENSDARG00000093619, ENSDARG00000110806 1 1 - - - - 1.000 - - - - sulfotransferase family 3, cytosolic sulfotransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1135]
67. si:dkey-46c2.2 si:dkey-46c2.2 2 1 - - 1.000 - - - - - -
68. TNFRSF14_7 TNFRSF14_7 0 1 - - 1.000 - - - - - -
69. CU694951.2 CU694951.2 1 1 - - - - 1.000 - - - -
70. SQLE SQLE 1 1 - - - - 1.000 - - - -
71. asb10 ENSDARG00000099461 27 1 - - 1.000 - - - - - - ankyrin repeat and SOCS box containing 10 [Source:ZFIN;Acc:ZDB-GENE-060929-1106]
72. si:dkey-30j22.5 si:dkey-30j22.5 2 1 - - - - 1.000 - - - -
73. pstpip1b ENSDARG00000053568, ENSDARG00000116801 0 1 - - 1.000 - - - - - - proline-serine-threonine phosphatase interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-051127-25]
74. asf1ba_1 ENSDARG00000101037 3 1 - - - - 1.000 - - - - anti-silencing function 1Ba histone chaperone [Source:ZFIN;Acc:ZDB-GENE-031118-197]
75. si:dkey-253e1.1 si:dkey-253e1.1 1 1 - - - - - - - 1.000 -
76. pias4b ENSDARG00000042215 12 1 - - - - - - - 1.000 - protein inhibitor of activated STAT, 4b [Source:ZFIN;Acc:ZDB-GENE-040426-1298]
77. cntn2 ENSDARG00000000472, ENSDARG00000110222 3 1 - - - - - - - 1.000 - contactin 2 [Source:ZFIN;Acc:ZDB-GENE-990630-12]
78. crygmxl1 ENSDARG00000018797 7 1 - - 1.000 - - - - - - crystallin, gamma MX, like 1 [Source:ZFIN;Acc:ZDB-GENE-050522-392]
79. ST3GAL1 ENSDARG00000079654 2 1 - - - - 1.000 - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060321-1]
80. si:dkey-25c4.1 si:dkey-25c4.1 1 1 - - - - 1.000 - - - -
81. si:dkey-84h14.3 si:dkey-84h14.3 3 1 - - 1.000 - - - - - -
82. wwox ENSDARG00000007614 0 1 - - 1.000 - - - - - - WW domain containing oxidoreductase [Source:ZFIN;Acc:ZDB-GENE-040426-858]
83. THBS1_1 THBS1_1 6 1 - - - - 1.000 - - - -
84. mir18a 0 1 - - - - 1.000 - - - - microRNA 18a
85. st3gal1 ENSDARG00000079654 4 1 - - 1.000 - - - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060321-1]
86. illr2 ENSDARG00000094882 1 1 - - - - 1.000 - - - - immune-related, lectin-like receptor 2 [Source:ZFIN;Acc:ZDB-GENE-050311-3]
87. si:ch211-13b16.1 si:ch211-13b16.1 1 1 - - 1.000 - - - - - -
88. si:dkey-282h22.5 ENSDARG00000092458 7 1 - - - - 1.000 - - - - si:dkey-282h22.5 [Source:ZFIN;Acc:ZDB-GENE-091204-220]
89. nabp1b ENSDARG00000043685 5 1 - - 1.000 - - - - - - nucleic acid binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-050913-74]
90. si:dkey-9a20.8 si:dkey-9a20.8 8 1 - - 1.000 - - - - - -
91. ETS1 ENSDARG00000024431 6 1 - - - - 1.000 - - - - v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:ZFIN;Acc:ZDB-GENE-021115-5]
92. fkbp6 ENSDARG00000030133, ENSDARG00000099077 6 1 - - - - - - - 1.000 - FK506 binding protein 6 [Source:NCBI gene;Acc:402839]
93. irgq2 ENSDARG00000068657 4 1 - - - - 1.000 - - - - immunity-related GTPase family, q2 [Source:ZFIN;Acc:ZDB-GENE-051212-7]
94. ZBED1_2 ZBED1_2 0 1 - - - - 1.000 - - - -
95. si:dkey-17e6.1 si:dkey-17e6.1 1 1 - - 1.000 - - - - - -
96. C6H21orf58 C6H21orf58 14 1 - - - - - - - 1.000 -
97. si:ch211-165f21.6 si:ch211-165f21.6 5 1 - - 1.000 - - - - - -
98. si:dkey-109j17.5 ENSDARG00000104891 2 1 - - 1.000 - - - - - - si:dkey-109j17.5 [Source:ZFIN;Acc:ZDB-GENE-090313-173]
99. CT027682.2 CT027682.2 0 1 - - - - 1.000 - - - -
100. CU652893.1 ENSDARG00000104131 3 1 - - 1.000 - - - - - -

There are 218 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA