Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-163f10.4

Gene Name Gene ID Reads Annotation
si:ch211-163f10.4 si:ch211-163f10.4 1










Genes with expression patterns similar to si:ch211-163f10.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-163f10.4 si:ch211-163f10.4 1 2 - - - - - - 1.000 - 1.000
2. CST7 CST7 22 1 - - - - - - - - 1.000
3. dgkza ENSDARG00000014439 82 1 - - - - - - 1.000 - - diacylglycerol kinase, zeta a [Source:ZFIN;Acc:ZDB-GENE-111104-3]
4. CR854907.1 ENSDARG00000097386 1 1 - - - - - - - - 1.000
5. si:dkeyp-4f2.3 ENSDARG00000096011, ENSDARG00000104584 5 1 - - - - - - 1.000 - - si:dkeyp-4f2.3 [Source:ZFIN;Acc:ZDB-GENE-110914-117]
6. si:ch211-113a14.15_1 2 1 - - - - - - 1.000 - - si:ch211-113a14.15
7. SNORA63 SNORA63 7 1 - - - - - - 1.000 - -
8. POLR2E POLR2E 1 1 - - - - - - - - 1.000
9. sox17 ENSDARG00000101717 11 1 - - - - - - 1.000 - - SRY (sex determining region Y)-box 17 [Source:ZFIN;Acc:ZDB-GENE-991213-1]
10. zgc:172053 ENSDARG00000038321 9 1 - - - - - - 1.000 - - zgc:172053 [Source:ZFIN;Acc:ZDB-GENE-080219-25]
11. BX682234.1 ENSDARG00000074732 5 1 - - - - - - 1.000 - - C-type lectin domain family 12 member B-like [Source:NCBI gene;Acc:101882781]
12. C24H8orf34 C24H8orf34 1 1 - - - - - - 1.000 - -
13. si:ch211-180p9.2 si:ch211-180p9.2 1 1 - - - - - - - - 1.000
14. zgc:153846 ENSDARG00000040738 1 1 - - - - - - 1.000 - - zgc:153846 [Source:ZFIN;Acc:ZDB-GENE-060929-898]
15. GALNT8_1 GALNT8_1 10 1 - - - - - - 1.000 - -
16. si:ch211-281k19.2 ENSDARG00000098133 1 1 - - - - - - - - 1.000 si:ch211-281k19.2 [Source:ZFIN;Acc:ZDB-GENE-090311-35]
17. cda 3 1 - - - - - - - - 1.000 cytidine deaminase
18. PEG3_17 PEG3_17 15 1 - - - - - - 1.000 - -
19. map2k4a ENSDARG00000063583 38 1 - - - - - - 1.000 - - mitogen-activated protein kinase kinase 4a [Source:ZFIN;Acc:ZDB-GENE-060512-98]
20. 5S_rRNA_10 5S_rRNA_10 2 1 - - - - - - - - 1.000
21. zgc:194418 ENSDARG00000111790 1 1 - - - - - - - - 1.000 zgc:194418 [Source:ZFIN;Acc:ZDB-GENE-080723-5]
22. cd74b ENSDARG00000036628 8 1 - - - - - - - - 1.000 CD74 molecule, major histocompatibility complex, class II invariant chain b [Source:ZFIN;Acc:ZDB-GENE-990910-10]
23. CR848788.1 ENSDARG00000103037 1 1 - - - - - - - - 1.000
24. SNORA81_1 SNORA81_1 8 1 - - - - - - 1.000 - -
25. CU861664.1 CU861664.1 53 1 - - - - - - 1.000 - -
26. RAPGEF4 ENSDARG00000079872 82 1 - - - - - - 1.000 - - Rap guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-385]
27. moxd1l ENSDARG00000069296, ENSDARG00000115126 2 1 - - - - - - 1.000 - - monooxygenase, DBH-like 1, like [Source:ZFIN;Acc:ZDB-GENE-060126-3]
28. NPFFR1 ENSDARG00000111997 29 1 - - - - - - 1.000 - - neuropeptide FF receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8106]
29. GTF3A GTF3A 6 1 - - - - - - - - 1.000
30. si:dkey-148b12.4 si:dkey-148b12.4 2 1 - - - - - - 1.000 - -
31. si:ch211-146g19.1 si:ch211-146g19.1 1 1 - - - - - - - - 1.000
32. IGFN1_2 IGFN1_2 3 1 - - - - - - - - 1.000
33. slc18b1 ENSDARG00000044047 7 1 - - - - - - 1.000 - - solute carrier family 18, subfamily B, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-386]
34. EVA1A ENSDARG00000061405 1 1 - - - - - - - - 1.000 eva-1 homolog A (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-060929-200]
35. CABZ01071407.1 CABZ01071407.1 6 1 - - - - - - - - 1.000
36. CABZ01071530.1 CABZ01071530.1 1 1 - - - - - - - - 1.000
37. ENSDARG00000087581 ENSDARG00000087581 2 1 - - - - - - - - 1.000
38. MYO1G ENSDARG00000036104 1 1 - - - - - - 1.000 - - myosin IG [Source:HGNC Symbol;Acc:HGNC:13880]
39. FAM13C FAM13C 1 1 - - - - - - - - 1.000
40. psmd2 ENSDARG00000103190 141 1 - - - - - - 1.000 - - proteasome 26S subunit, non-ATPase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1480]
41. atf1 ENSDARG00000044301, ENSDARG00000109865 2 1 - - - - - - - - 1.000 activating transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4334]
42. lmod2a ENSDARG00000045634, ENSDARG00000112060, ENSDARG00000113325 2 1 - - - - - - - - 1.000 leiomodin 2 (cardiac) a [Source:ZFIN;Acc:ZDB-GENE-040912-41]
43. ENSDARG00000091099 ENSDARG00000091099 5 1 - - - - - - 1.000 - -
44. GPR78 GPR78 17 1 - - - - - - 1.000 - -
45. fam219b ENSDARG00000104637 3 1 - - - - - - 1.000 - - family with sequence similarity 219, member B [Source:ZFIN;Acc:ZDB-GENE-050327-82]
46. HIST2H4B HIST2H4B 9 1 - - - - - - - - 1.000
47. CABZ01073112.1 CABZ01073112.1 40 1 - - - - - - 1.000 - -
48. lhx6 ENSDARG00000006896, ENSDARG00000112520 98 1 - - - - - - 1.000 - - LIM homeobox 6 [Source:ZFIN;Acc:ZDB-GENE-041025-1]
49. si:dkey-28d5.13 ENSDARG00000077260 3 1 - - - - - - 1.000 - - si:dkey-28d5.13 [Source:ZFIN;Acc:ZDB-GENE-060503-636]
50. purg ENSDARG00000099187, ENSDARG00000114450 33 1 - - - - - - 1.000 - - purine-rich element binding protein G [Source:ZFIN;Acc:ZDB-GENE-070702-3]
51. mir10b-2 116 1 - - - - - - 1.000 - - microRNA 10b-2
52. CR457462.1 CR457462.1 11 1 - - - - - - 1.000 - -
53. ppp2r3a ENSDARG00000077722 7 1 - - - - - - - - 1.000 protein phosphatase 2, regulatory subunit B'', alpha [Source:ZFIN;Acc:ZDB-GENE-070912-646]
54. arr3a ENSDARG00000056511, ENSDARG00000114648 192 1 - - - - - - 1.000 - - arrestin 3a, retinal (X-arrestin) [Source:ZFIN;Acc:ZDB-GENE-040718-102]
55. si:dkey-14i17.2 si:dkey-14i17.2 10 1 - - - - - - - - 1.000
56. zgc:66455 ENSDARG00000052375 3 1 - - - - - - 1.000 - - zgc:66455 [Source:ZFIN;Acc:ZDB-GENE-040426-1642]
57. hs3st4 ENSDARG00000052648 6 1 - - - - - - - - 1.000 heparan sulfate (glucosamine) 3-O-sulfotransferase 4 [Source:ZFIN;Acc:ZDB-GENE-070202-8]
58. trim35-23 ENSDARG00000102368, ENSDARG00000113611 1 1 - - - - - - - - 1.000 tripartite motif containing 35-23 [Source:ZFIN;Acc:ZDB-GENE-060503-295]
59. si:dkey-24p1.6 ENSDARG00000028784, ENSDARG00000097212 23 1 - - - - - - 1.000 - - si:dkey-24p1.6 [Source:ZFIN;Acc:ZDB-GENE-060503-67]
60. lipt2 ENSDARG00000069852 14 1 - - - - - - 1.000 - - lipoyl(octanoyl) transferase 2 [Source:ZFIN;Acc:ZDB-GENE-060312-18]
61. TRHDE TRHDE 1 1 - - - - - - 1.000 - -
62. SLC25A22_1 SLC25A22_1 3 1 - - - - - - 1.000 - -
63. CR936977.1 ENSDARG00000100144 4 1 - - - - - - - - 1.000
64. CABZ01066695.1 CABZ01066695.1 12 1 - - - - - - 1.000 - -
65. ENSDARG00000077328 ENSDARG00000077328 1 1 - - - - - - 1.000 - -
66. CMAS CMAS 10 1 - - - - - - - - 1.000
67. CABZ01048549.1 CABZ01048549.1 1 1 - - - - - - 1.000 - -
68. ripply2 ENSDARG00000070535 18 1 - - - - - - 1.000 - - ripply transcriptional repressor 2 [Source:ZFIN;Acc:ZDB-GENE-060113-2]
69. rrad ENSDARG00000052011, ENSDARG00000112434 70 1 - - - - - - 1.000 - - Ras-related associated with diabetes [Source:ZFIN;Acc:ZDB-GENE-030131-5607]
70. zgc:173856 ENSDARG00000045424 5 1 - - - - - - - - 1.000 zgc:173856 [Source:ZFIN;Acc:ZDB-GENE-030131-5358]
71. si:dkey-4c23.3 ENSDARG00000092028, ENSDARG00000110418 4 1 - - - - - - - - 1.000 si:dkey-4c23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-668]
72. hbaa2 ENSDARG00000069735 10 1 - - - - - - 1.000 - - hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
73. camk1ga ENSDARG00000044526 5 1 - - - - - - 1.000 - - calcium/calmodulin-dependent protein kinase IGa [Source:ZFIN;Acc:ZDB-GENE-030131-7594]
74. si:ch211-22d5.2 ENSDARG00000079031 3 1 - - - - - - - - 1.000 si:ch211-22d5.2 [Source:ZFIN;Acc:ZDB-GENE-091204-283]
75. U4atac U4atac 47 1 - - - - - - 1.000 - -
76. spo11 ENSDARG00000013837 7 1 - - - - - - 1.000 - - SPO11 meiotic protein covalently bound to DSB [Source:ZFIN;Acc:ZDB-GENE-040426-1900]
77. ncf2 ENSDARG00000005821 28 1 - - - - - - 1.000 - - neutrophil cytosolic factor 2 [Source:ZFIN;Acc:ZDB-GENE-070209-29]
78. si:dkey-33k1.2 si:dkey-33k1.2 1 1 - - - - - - - - 1.000
79. si:dkey-102f14.7 ENSDARG00000092255 1 1 - - - - - - 1.000 - - si:dkey-102f14.7 [Source:ZFIN;Acc:ZDB-GENE-060503-895]
80. si:ch73-95a24.1 si:ch73-95a24.1 11 1 - - - - - - - - 1.000
81. tcp10 tcp10 1 1 - - - - - - - - 1.000
82. si:ch211-128b10.4 si:ch211-128b10.4 3 1 - - - - - - - - 1.000
83. DIP2B DIP2B 18 1 - - - - - - 1.000 - -
84. si:ch211-140o17.1 si:ch211-140o17.1 0 1 - - - - - - 1.000 - -
85. cthrc1b ENSDARG00000001971 44 1 - - - - - - 1.000 - - collagen triple helix repeat containing 1b [Source:ZFIN;Acc:ZDB-GENE-050420-46]
86. slc5a9 ENSDARG00000005518 16 1 - - - - - - - - 1.000 solute carrier family 5 (sodium/sugar cotransporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-080513-3]
87. SNORA81 SNORA81 47 1 - - - - - - 1.000 - -
88. si:dkeyp-25a3.1 si:dkeyp-25a3.1 4 1 - - - - - - - - 1.000
89. VWDE_1 VWDE_1 2 1 - - - - - - 1.000 - -
90. CABZ01090975.1 CABZ01090975.1 9 1 - - - - - - 1.000 - -
91. si:dkey-94f20.4 ENSDARG00000016923 2 1 - - - - - - 1.000 - - si:dkey-94f20.4 [Source:ZFIN;Acc:ZDB-GENE-121214-276]
92. CU469532.1 CU469532.1 31 1 - - - - - - 1.000 - -
93. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 1 - - - - - - 1.000 - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
94. BX323557.2 BX323557.2 1 1 - - - - - - - - 1.000
95. DGKA DGKA 8 1 - - - - - - - - 1.000
96. si:ch211-199i18.8 si:ch211-199i18.8 4 1 - - - - - - - - 1.000
97. wu:fi26e04 wu:fi26e04 15 1 - - - - - - 1.000 - -
98. ENSDARG00000074422 ENSDARG00000074422 61 1 - - - - - - 1.000 - -
99. rhcgl1 ENSDARG00000007080, ENSDARG00000111618 28 1 - - - - - - 1.000 - - Rh family, C glycoprotein, like 1 [Source:ZFIN;Acc:ZDB-GENE-060209-2]
100. HTRA2_6 HTRA2_6 0 1 - - - - - - 1.000 - -

There are 171 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA