Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-162i8.4

Gene Name Gene ID Reads Annotation
si:ch211-162i8.4 ENSDARG00000087168, ENSDARG00000094484 69 si:ch211-162i8.4 [Source:ZFIN;Acc:ZDB-GENE-110914-48]










Genes with expression patterns similar to si:ch211-162i8.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-162i8.4 ENSDARG00000087168, ENSDARG00000094484 69 8 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 si:ch211-162i8.4 [Source:ZFIN;Acc:ZDB-GENE-110914-48]
2. adamtsl7 ENSDARG00000055439 575 1.94 0.983 0.957 - - - - - - - ADAMTS-like 7 [Source:ZFIN;Acc:ZDB-GENE-070816-2]
3. sstr3 ENSDARG00000014477 14 1.923 1.000 - - - - - 0.923 - - somatostatin receptor 3 [Source:ZFIN;Acc:ZDB-GENE-061009-35]
4. pag1 ENSDARG00000055875 21 1.923 1.000 - - - - - 0.923 - - phosphoprotein membrane anchor with glycosphingolipid microdomains 1 [Source:ZFIN;Acc:ZDB-GENE-060503-586]
5. zgc:152670 ENSDARG00000017038, ENSDARG00000117151 587 1.922 - 0.980 0.942 - - - - - - zgc:152670 [Source:ZFIN;Acc:ZDB-GENE-060929-954]
6. CABZ01060813.1 CABZ01060813.1 12 1.916 0.993 - - - - - 0.923 - -
7. CYP46A1 CYP46A1 16 1.903 - 0.980 - - - - 0.923 - -
8. nrg2b ENSDARG00000086585 100 1.903 - 0.980 - - - - 0.923 - - neuregulin 2b [Source:ZFIN;Acc:ZDB-GENE-090205-2]
9. NSUN6 ENSDARG00000103478 29 1.901 - 0.978 - - - - 0.923 - - NOL1/NOP2/Sun domain family, member 6 [Source:ZFIN;Acc:ZDB-GENE-080808-8]
10. NAV1_1 NAV1_1 35 1.9 0.977 - - - - - 0.923 - -
11. slco4a1 ENSDARG00000075948 74 1.895 - 0.972 - - - - 0.923 - - solute carrier organic anion transporter family, member 4A1 [Source:ZFIN;Acc:ZDB-GENE-060606-4]
12. si:ch211-241j12.3 ENSDARG00000043963 128 1.874 0.959 0.915 - - - - - - - si:ch211-241j12.3 [Source:ZFIN;Acc:ZDB-GENE-040724-72]
13. TPPP2 ENSDARG00000035338, ENSDARG00000113727 298 1.861 - 0.932 - - - - 0.929 - - tubulin polymerization-promoting protein family member 2 [Source:ZFIN;Acc:ZDB-GENE-140106-24]
14. stap2a ENSDARG00000092810 591 1.833 - 0.986 - - - - 0.847 - - signal transducing adaptor family member 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5383]
15. ptchd4 ENSDARG00000008249 17 1.821 - 0.898 - - - - 0.923 - - patched domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041001-178]
16. golim4a ENSDARG00000100977, ENSDARG00000106760, ENSDARG00000113393 144 1.815 - 0.892 - - - - 0.923 - - golgi integral membrane protein 4a [Source:ZFIN;Acc:ZDB-GENE-041026-2]
17. lin7b ENSDARG00000037932 150 1.804 0.981 - - - - - 0.823 - - lin-7 homolog B (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-041011-1]
18. itgb5 ENSDARG00000012942, ENSDARG00000114990 406 1.804 0.846 0.958 - - - - - - - integrin, beta 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6022]
19. C24H8orf44 C24H8orf44 405 1.803 0.955 0.848 - - - - - - -
20. gpr173 ENSDARG00000042922 238 1.767 - - 0.844 - - - 0.923 - - G protein-coupled receptor 173 [Source:ZFIN;Acc:ZDB-GENE-000710-1]
21. tlx2 ENSDARG00000011273 870 1.765 - 0.965 - - - - 0.800 - - T cell leukemia homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-020208-1]
22. phactr3a ENSDARG00000058243 150 1.753 - 0.946 - - - - 0.807 - - phosphatase and actin regulator 3a [Source:ZFIN;Acc:ZDB-GENE-080220-4]
23. fbxl3b ENSDARG00000021882 58 1.731 - 0.808 - - - - 0.923 - - F-box and leucine-rich repeat protein 3b [Source:ZFIN;Acc:ZDB-GENE-041010-178]
24. F2RL3 ENSDARG00000079399 29 1.718 - 0.826 0.892 - - - - - - F2R like thrombin or trypsin receptor 3 [Source:HGNC Symbol;Acc:HGNC:3540]
25. C21H5orf24 C21H5orf24 333 1.714 - - 0.790 - - - 0.924 - -
26. mir34 176 1.707 - 0.859 - - - - 0.848 - - microRNA 34
27. tnk1 ENSDARG00000069433 639 1.703 0.826 0.877 - - - - - - - tyrosine kinase, non-receptor, 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7427]
28. il13 ENSDARG00000077809 8 1.702 - - - - 0.779 - 0.923 - - interleukin 13 [Source:ZFIN;Acc:ZDB-GENE-100727-2]
29. gnsa ENSDARG00000023766 545 1.686 0.972 0.714 - - - - - - - glucosamine (N-acetyl)-6-sulfatase a [Source:ZFIN;Acc:ZDB-GENE-050107-5]
30. CABZ01074899.1 CABZ01074899.1 89 1.682 - 0.913 - - 0.769 - - - -
31. zgc:113389 zgc:113389 123 1.673 - 0.771 0.902 - - - - - -
32. ncam1b ENSDARG00000007220 233 1.662 - - 0.910 - - - 0.752 - - neural cell adhesion molecule 1b [Source:ZFIN;Acc:ZDB-GENE-010822-2]
33. gcc1 ENSDARG00000045541 1821 1.659 0.919 0.740 - - - - - - - GRIP and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040801-118]
34. prkx ENSDARG00000060716 530 1.642 0.841 0.801 - - - - - - - protein kinase X-linked [Source:ZFIN;Acc:ZDB-GENE-090313-408]
35. smtlb ENSDARG00000017251 7 1.64 - - - 0.717 - - 0.923 - - somatolactin beta [Source:ZFIN;Acc:ZDB-GENE-060123-1]
36. dclk1a ENSDARG00000018856 177 1.64 - - 0.924 - - - 0.716 - - doublecortin-like kinase 1a [Source:ZFIN;Acc:ZDB-GENE-061013-124]
37. CCDC89 CCDC89 40 1.634 - - - - 0.761 - 0.873 - -
38. phf20a ENSDARG00000002750 90 1.632 0.709 - - - - - 0.923 - - PHD finger protein 20, a [Source:ZFIN;Acc:ZDB-GENE-070912-270]
39. ap3m2 ENSDARG00000016128 851 1.627 - 0.898 - - - - 0.729 - - adaptor related protein complex 3 subunit mu 2 [Source:ZFIN;Acc:ZDB-GENE-021022-2]
40. sbf2 ENSDARG00000059460 311 1.617 - 0.807 0.810 - - - - - - SET binding factor 2 [Source:ZFIN;Acc:ZDB-GENE-030911-10]
41. CABZ01038514.1 CABZ01038514.1 724 1.612 0.851 0.761 - - - - - - -
42. CU856539.1 ENSDARG00000010023 190 1.607 - - 0.766 - - - 0.841 - - hippocampus abundant transcript 1 protein-like [Source:NCBI gene;Acc:557306]
43. CEACAM7 CEACAM7 46 1.607 - 0.818 - - 0.789 - - - -
44. zhx2 zhx2 365 1.602 - - 0.866 - 0.736 - - - -
45. DOCK4 DOCK4 78 1.566 - - 0.858 - - - 0.708 - -
46. rnd1 rnd1 1086 1.565 - 0.765 0.800 - - - - - -
47. si:ch211-181p13.2 ENSDARG00000096484 94 1.553 - 0.845 - 0.708 - - - - - si:ch211-181p13.2 [Source:ZFIN;Acc:ZDB-GENE-030131-9054]
48. APBB3 ENSDARG00000053771 654 1.539 - 0.819 - - - - 0.720 - - amyloid beta (A4) precursor protein-binding, family B, member 3 [Source:ZFIN;Acc:ZDB-GENE-140106-53]
49. LURAP1 ENSDARG00000044406, ENSDARG00000115301 938 1.538 - 0.757 0.781 - - - - - - leucine rich adaptor protein 1 [Source:ZFIN;Acc:ZDB-GENE-070928-35]
50. si:ch211-216b21.2 ENSDARG00000060253 54 1.536 - - - - 0.729 - 0.807 - - si:ch211-216b21.2 [Source:ZFIN;Acc:ZDB-GENE-130603-96]
51. napg napg 645 1.535 - 0.820 - - - - 0.715 - -
52. fam219ab ENSDARG00000013813 591 1.509 0.715 - - - - - 0.794 - - family with sequence similarity 219, member Ab [Source:ZFIN;Acc:ZDB-GENE-050522-213]
53. si:dkey-18j14.4 si:dkey-18j14.4 60 1.506 - 0.789 - 0.717 - - - - -
54. gfra1b ENSDARG00000102564 821 1.498 - - 0.745 - - - 0.753 - - gdnf family receptor alpha 1b [Source:ZFIN;Acc:ZDB-GENE-010226-3]
55. myt1la ENSDARG00000008209 120 1.494 - - - - 0.700 - 0.794 - - myelin transcription factor 1-like, a [Source:ZFIN;Acc:ZDB-GENE-041001-172]
56. hs3st3b1b ENSDARG00000086645, ENSDARG00000113233 1194 1.488 - 0.760 - - - - 0.728 - - heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1b [Source:ZFIN;Acc:ZDB-GENE-070202-5]
57. 5S_rRNA 5S_rRNA 239 1.486 - - 0.752 0.734 - - - - -
58. pim2 ENSDARG00000059001 1893 1.484 0.754 - 0.730 - - - - - - Pim-2 proto-oncogene, serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-000831-6]
59. mta3 ENSDARG00000054903, ENSDARG00000113436 353 1.477 - - 0.762 0.715 - - - - - metastasis associated 1 family, member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6485]
60. AUTS2 AUTS2 504 1.446 - 0.741 - - - - 0.705 - -
61. prkchb ENSDARG00000043243 126 1.436 0.706 - 0.730 - - - - - - protein kinase C, eta, b [Source:ZFIN;Acc:ZDB-GENE-041001-104]
62. fhdc1 ENSDARG00000074812 934 1.426 - - 0.722 - - - 0.704 - - FH2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040826-4]
63. CABZ01063077.1 CABZ01063077.1 22 1 - - - - - - 1.000 - -
64. racgap1 ENSDARG00000015460 38 1 1.000 - - - - - - - - Rac GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1917]
65. foxi1 ENSDARG00000104566 176 1 1.000 - - - - - - - - forkhead box i1 [Source:ZFIN;Acc:ZDB-GENE-030505-1]
66. si:dkey-176g1.6 si:dkey-176g1.6 5 1 1.000 - - - - - - - -
67. si:ch211-212i14.2 si:ch211-212i14.2 9 1 1.000 - - - - - - - -
68. rrm2 ENSDARG00000020711, ENSDARG00000078069 1280 1 - - - - - - 1.000 - - ribonucleotide reductase M2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-25]
69. slc35c1 ENSDARG00000104669 65 1 - 1.000 - - - - - - - solute carrier family 35 (GDP-fucose transporter), member C1 [Source:ZFIN;Acc:ZDB-GENE-041212-11]
70. ptprja ENSDARG00000033042 25 1 - 1.000 - - - - - - - protein tyrosine phosphatase, receptor type, J a [Source:ZFIN;Acc:ZDB-GENE-030131-8301]
71. BX004785.5 BX004785.5 35 1 - 1.000 - - - - - - -
72. CU019646.1 ENSDARG00000117632 223 1 1.000 - - - - - - - - uncharacterized LOC110439932 [Source:NCBI gene;Acc:110439932]
73. zgc:162509 ENSDARG00000070604, ENSDARG00000095688 25 1 1.000 - - - - - - - - zgc:162509 [Source:ZFIN;Acc:ZDB-GENE-050809-100]
74. si:dkey-27p18.3 ENSDARG00000092228 38 1 1.000 - - - - - - - - si:dkey-27p18.3 [Source:ZFIN;Acc:ZDB-GENE-060526-287]
75. scgn ENSDARG00000058732, ENSDARG00000115991 119 1 - 1.000 - - - - - - - secretagogin, EF-hand calcium binding protein [Source:ZFIN;Acc:ZDB-GENE-041010-82]
76. si:dkey-56e5.2 si:dkey-56e5.2 14 1 1.000 - - - - - - - -
77. zgc:114037_3 17 1 1.000 - - - - - - - - zgc:114037
78. chrna3 ENSDARG00000100991, ENSDARG00000116434 63 1 - - - - - - 1.000 - - cholinergic receptor, nicotinic, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070822-1]
79. PATL2 PATL2 10 1 1.000 - - - - - - - -
80. si:ch211-66k16.28 ENSDARG00000088423 80 1 - 1.000 - - - - - - - si:ch211-66k16.28 [Source:ZFIN;Acc:ZDB-GENE-120709-59]
81. PPP1R16A ENSDARG00000076980 40 1 1.000 - - - - - - - - protein phosphatase 1, regulatory subunit 16A [Source:ZFIN;Acc:ZDB-GENE-121214-252]
82. OVOL1 75 1 1.000 - - - - - - - - ovo-like zinc finger 1, transcript variant X1
83. si:dkey-4c15.13 ENSDARG00000095704 13 1 1.000 - - - - - - - - si:dkey-4c15.13 [Source:ZFIN;Acc:ZDB-GENE-030131-2023]
84. si:dkey-4c15.5 si:dkey-4c15.5 36 1 1.000 - - - - - - - -
85. flt3 ENSDARG00000058503 32 0.999 0.999 - - - - - - - - fms-related tyrosine kinase 3 [Source:ZFIN;Acc:ZDB-GENE-050114-4]
86. ldb2a ENSDARG00000019579 26 0.998 0.998 - - - - - - - - LIM domain binding 2a [Source:ZFIN;Acc:ZDB-GENE-990415-136]
87. LAMB3 LAMB3 31 0.997 0.997 - - - - - - - -
88. slc35g2a ENSDARG00000056262 52 0.996 - - - - - - 0.996 - - solute carrier family 35, member G2a [Source:ZFIN;Acc:ZDB-GENE-041114-202]
89. TMEM151A ENSDARG00000077986 78 0.996 - - - - - - 0.996 - - transmembrane protein 151A [Source:HGNC Symbol;Acc:HGNC:28497]
90. C7 C7 81 0.995 0.995 - - - - - - - -
91. hif1aa ENSDARG00000006181 109 0.995 - - - - - - 0.995 - - hypoxia inducible factor 1 subunit alpha a [Source:ZFIN;Acc:ZDB-GENE-080917-55]
92. CABZ01073654.1 CABZ01073654.1 16 0.994 0.994 - - - - - - - -
93. si:dkeyp-52c3.2 ENSDARG00000070516 92 0.993 0.993 - - - - - - - - si:dkeyp-52c3.2 [Source:ZFIN;Acc:ZDB-GENE-110411-46]
94. ikbke ENSDARG00000070606, ENSDARG00000111682, ENSDARG00000111787 54 0.992 0.992 - - - - - - - - inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon [Source:ZFIN;Acc:ZDB-GENE-040718-251]
95. CR356223.4 CR356223.4 42 0.989 - 0.989 - - - - - - -
96. lingo2 lingo2 67 0.989 - 0.989 - - - - - - -
97. neto1l ENSDARG00000071596 57 0.988 - - - - - - 0.988 - - neuropilin (NRP) and tolloid (TLL)-like 1, like [Source:ZFIN;Acc:ZDB-GENE-091207-1]
98. lrrc31 ENSDARG00000057392 61 0.987 0.987 - - - - - - - - leucine rich repeat containing 31 [Source:ZFIN;Acc:ZDB-GENE-091204-286]
99. THSD7A THSD7A 69 0.987 0.987 - - - - - - - -
100. crp1 ENSDARG00000071454 31 0.987 0.987 - - - - - - - - C-reactive protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-314]

There are 1729 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA