Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-161h7.4

Gene Name Gene ID Reads Annotation
si:ch211-161h7.4 ENSDARG00000087238 4399 si:ch211-161h7.4 [Source:ZFIN;Acc:ZDB-GENE-091118-108]










Genes with expression patterns similar to si:ch211-161h7.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-161h7.4 ENSDARG00000087238 4399 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-161h7.4 [Source:ZFIN;Acc:ZDB-GENE-091118-108]
2. ppp4r2a ENSDARG00000026540 1782 3.026 0.864 0.704 - 0.730 - - - - 0.728 protein phosphatase 4, regulatory subunit 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4922]
3. pold3 ENSDARG00000076169 694 2.601 0.871 - - 0.868 - - - 0.862 - polymerase (DNA-directed), delta 3, accessory subunit [Source:ZFIN;Acc:ZDB-GENE-060512-59]
4. snrpb ENSDARG00000011125 11729 2.561 - - 0.782 - 0.901 - - 0.878 - small nuclear ribonucleoprotein polypeptides B and B1 [Source:ZFIN;Acc:ZDB-GENE-040426-1819]
5. sdc4 ENSDARG00000059906 10105 2.532 - 0.783 0.878 - 0.871 - - - - syndecan 4 [Source:ZFIN;Acc:ZDB-GENE-061111-1]
6. arfrp1 ENSDARG00000057857 2840 2.506 0.879 - - - 0.828 - - 0.799 - ADP-ribosylation factor related protein 1 [Source:ZFIN;Acc:ZDB-GENE-050227-14]
7. rbm25 rbm25 3629 2.502 0.892 - 0.872 - - - - - 0.738
8. fbl ENSDARG00000053912 5891 2.497 0.859 - 0.813 - 0.825 - - - - fibrillarin [Source:ZFIN;Acc:ZDB-GENE-040426-1936]
9. tnfaip3 ENSDARG00000027777 1066 2.462 - - 0.782 0.845 - - - 0.835 - tumor necrosis factor, alpha-induced protein 3 [Source:ZFIN;Acc:ZDB-GENE-100212-2]
10. ehd3 ENSDARG00000007869 3238 2.46 0.793 - - - 0.820 - - 0.847 - EH-domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-041014-352]
11. ranbp1 ENSDARG00000014817 3371 2.457 0.813 - - - 0.910 - - - 0.734 RAN binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2548]
12. wdr33 ENSDARG00000018272 4076 2.452 - - - 0.826 0.906 - - - 0.720 WD repeat domain 33 [Source:ZFIN;Acc:ZDB-GENE-040924-3]
13. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 2.446 - - 0.780 - 0.880 - - - 0.786 pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
14. MKI67 ENSDARG00000091150 11038 2.435 - - - - 0.865 0.780 - 0.790 - marker of proliferation Ki-67 [Source:ZFIN;Acc:ZDB-GENE-030131-9771]
15. CPEB4 CPEB4 3249 2.387 - - 0.764 - 0.832 - - 0.791 -
16. flot2a ENSDARG00000004830 5276 2.373 0.842 - - - 0.810 0.721 - - - flotillin 2a [Source:ZFIN;Acc:ZDB-GENE-020430-3]
17. ufm1 ENSDARG00000043857 4152 2.345 - 0.758 - - 0.830 - - 0.757 - ubiquitin-fold modifier 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2930]
18. cand1 ENSDARG00000017841 8164 2.32 - 0.725 0.855 - - - 0.740 - - cullin-associated and neddylation-dissociated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2872]
19. SERBP1 SERBP1 9276 2.317 0.750 0.715 0.852 - - - - - -
20. xpnpep1 ENSDARG00000029011 1723 2.292 0.793 0.728 0.771 - - - - - - X-prolyl aminopeptidase (aminopeptidase P) 1, soluble [Source:ZFIN;Acc:ZDB-GENE-040426-999]
21. kdm5c ENSDARG00000006124 4389 2.287 - - 0.854 - - 0.713 0.720 - - lysine (K)-specific demethylase 5C [Source:ZFIN;Acc:ZDB-GENE-060810-94]
22. rrp7a ENSDARG00000098934 1123 2.273 0.851 - - 0.710 0.712 - - - - ribosomal RNA processing 7 homolog A [Source:ZFIN;Acc:ZDB-GENE-050417-38]
23. luc7l ENSDARG00000055903 3357 2.256 0.720 - 0.831 - - 0.705 - - - LUC7-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-111]
24. lmnb1 ENSDARG00000044299 9817 2.208 - - 0.763 - 0.745 0.700 - - - lamin B1 [Source:ZFIN;Acc:ZDB-GENE-020424-2]
25. arl4cb ENSDARG00000032708, ENSDARG00000110274 2769 1.788 0.904 - - - 0.884 - - - - ADP-ribosylation factor-like 4Cb [Source:ZFIN;Acc:ZDB-GENE-040426-2382]
26. GATAD2B ENSDARG00000005834 3855 1.774 0.882 - - - - - - 0.892 - GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
27. CR387996.1 ENSDARG00000097774 3037 1.737 0.914 - - - - - - 0.823 -
28. CABZ01038494.1 ENSDARG00000088258 908 1.73 - - - - - - 0.835 0.895 - modulator of smoothened a [Source:NCBI gene;Acc:100535551]
29. pitpnbl ENSDARG00000015310, ENSDARG00000110980 3266 1.729 - 0.820 - - - - - 0.909 - phosphatidylinositol transfer protein, beta, like [Source:ZFIN;Acc:ZDB-GENE-040426-2791]
30. utp3 ENSDARG00000056720 922 1.728 0.843 - - - 0.885 - - - - UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040912-163]
31. zgc:173726 ENSDARG00000077078 250 1.724 0.902 - - 0.822 - - - - - zgc:173726 [Source:ZFIN;Acc:ZDB-GENE-071004-108]
32. PIK3CA_1 PIK3CA_1 4065 1.723 0.862 0.861 - - - - - - -
33. fmnl2b ENSDARG00000075041 1744 1.721 0.879 - 0.842 - - - - - - formin-like 2b [Source:ZFIN;Acc:ZDB-GENE-041111-182]
34. adi1 ENSDARG00000020448 1402 1.721 - 0.852 - - 0.869 - - - - acireductone dioxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2799]
35. MDC1 ENSDARG00000086764 1851 1.718 - - 0.831 - 0.887 - - - - mediator of DNA damage checkpoint 1 [Source:ZFIN;Acc:ZDB-GENE-060810-185]
36. fbxl5 ENSDARG00000043046 1403 1.713 - - - - 0.864 - - 0.849 - F-box and leucine-rich repeat protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-900]
37. nle1 ENSDARG00000057105 522 1.709 0.881 - - 0.828 - - - - - notchless homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050522-321]
38. tcea1 ENSDARG00000003531 2912 1.706 - - - - 0.931 - - - 0.775 transcription elongation factor A (SII), 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8049]
39. kpnb3 ENSDARG00000040245 7967 1.704 0.886 0.818 - - - - - - - karyopherin (importin) beta 3 [Source:ZFIN;Acc:ZDB-GENE-030424-2]
40. cwc25 ENSDARG00000003382 2134 1.702 0.800 0.902 - - - - - - - CWC25 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2817]
41. arl6ip4 ENSDARG00000105036, ENSDARG00000110324, ENSDARG00000116805 1142 1.696 0.886 - 0.810 - - - - - - ADP-ribosylation factor-like 6 interacting protein 4 [Source:ZFIN;Acc:ZDB-GENE-050522-405]
42. nlk1 ENSDARG00000006566 1123 1.691 - - 0.798 - - - - 0.893 - nemo-like kinase, type 1 [Source:ZFIN;Acc:ZDB-GENE-040701-1]
43. pho ENSDARG00000035133 670 1.681 0.890 - - 0.791 - - - - - phoenix [Source:ZFIN;Acc:ZDB-GENE-030131-5935]
44. mapre1b ENSDARG00000002659 9119 1.679 - - - - 0.882 - - - 0.797 microtubule-associated protein, RP/EB family, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2256]
45. prpf40a ENSDARG00000058467 6565 1.676 0.764 - - - 0.912 - - - - PRP40 pre-mRNA processing factor 40 homolog A [Source:ZFIN;Acc:ZDB-GENE-030131-274]
46. rab18a ENSDARG00000055291, ENSDARG00000111917 2088 1.666 0.873 - 0.793 - - - - - - RAB18A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030131-3980]
47. setd8a 2549 1.664 - - 0.788 - 0.876 - - - - SET domain containing (lysine methyltransferase) 8a
48. hnrnpr ENSDARG00000014569 3423 1.66 - - 0.886 0.774 - - - - - heterogeneous nuclear ribonucleoprotein R [Source:ZFIN;Acc:ZDB-GENE-040426-2766]
49. tmem176l.1 ENSDARG00000099491 860 1.659 - 0.796 - - 0.863 - - - - transmembrane protein 176l.1 [Source:ZFIN;Acc:ZDB-GENE-080829-11]
50. arrb2b ENSDARG00000011545 3126 1.659 - - - - 0.834 - - 0.825 - arrestin, beta 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1332]
51. slc1a2b ENSDARG00000102453 3136 1.658 - - - - 0.803 - - 0.855 - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
52. ndnl2 ENSDARG00000058212 1042 1.654 - - - 0.807 - - - 0.847 - necdin-like 2 [Source:ZFIN;Acc:ZDB-GENE-031107-3]
53. eya3 ENSDARG00000036100 1965 1.653 - - 0.799 - 0.854 - - - - EYA transcriptional coactivator and phosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-864]
54. ezh2 ENSDARG00000010571 3273 1.652 - - - - 0.912 - - - 0.740 enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:ZFIN;Acc:ZDB-GENE-041111-259]
55. dscr3 1229 1.652 0.865 - 0.787 - - - - - - Down syndrome critical region 3
56. irf2a ENSDARG00000007387 915 1.649 - - 0.794 - - - - 0.855 - interferon regulatory factor 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4135]
57. rad51 ENSDARG00000041411, ENSDARG00000111948 1056 1.647 0.846 - 0.801 - - - - - - RAD51 recombinase [Source:ZFIN;Acc:ZDB-GENE-040426-2286]
58. asb6 ENSDARG00000007125 389 1.642 0.881 - - 0.761 - - - - - ankyrin repeat and SOCS box containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-338]
59. tdg tdg 3269 1.637 - - - - 0.903 0.734 - - -
60. mapk6 ENSDARG00000032103 6422 1.637 - - - - 0.891 0.746 - - - mitogen-activated protein kinase 6 [Source:ZFIN;Acc:ZDB-GENE-050420-7]
61. ptpn13 ENSDARG00000103699 2866 1.634 - - - - - - 0.834 0.800 - protein tyrosine phosphatase, non-receptor type 13 [Source:ZFIN;Acc:ZDB-GENE-070410-72]
62. pum1 ENSDARG00000099256 5017 1.633 - - 0.885 - - - - - 0.748 pumilio RNA-binding family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2074]
63. rpa2 ENSDARG00000037188 4284 1.632 - 0.702 - - 0.930 - - - - replication protein A2 [Source:ZFIN;Acc:ZDB-GENE-010131-3]
64. rassf10a 417 1.631 0.773 - - - 0.858 - - - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 10a
65. stm ENSDARG00000035694 1567 1.63 0.851 - 0.779 - - - - - - starmaker [Source:ZFIN;Acc:ZDB-GENE-031112-4]
66. eif4h ENSDARG00000042252 6742 1.627 - - 0.875 - - - - - 0.752 eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]
67. sipa1l2 ENSDARG00000061640 4545 1.626 - - 0.827 - - - - 0.799 - signal-induced proliferation-associated 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-050208-66]
68. pmela ENSDARG00000091298 5179 1.624 0.847 - - - 0.777 - - - - premelanosome protein a [Source:ZFIN;Acc:ZDB-GENE-030131-9818]
69. arhgef1b ENSDARG00000055837 2330 1.623 0.781 - - - 0.842 - - - - Rho guanine nucleotide exchange factor (GEF) 1b [Source:ZFIN;Acc:ZDB-GENE-060616-136]
70. boc ENSDARG00000074335 4832 1.622 0.795 - - - - - - 0.827 - BOC cell adhesion associated, oncogene regulated [Source:ZFIN;Acc:ZDB-GENE-030131-6560]
71. GTSE1 ENSDARG00000013719 1115 1.619 - - 0.807 - - - - 0.812 - G-2 and S-phase expressed 1 [Source:ZFIN;Acc:ZDB-GENE-050522-493]
72. get4 ENSDARG00000024398 1818 1.619 - 0.807 - - - - - 0.812 - golgi to ER traffic protein 4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5399]
73. rtca ENSDARG00000002215 3558 1.619 - - - - - 0.840 - - 0.779 RNA 3'-terminal phosphate cyclase [Source:ZFIN;Acc:ZDB-GENE-030131-9687]
74. taf11 ENSDARG00000037855 2624 1.617 - - - - 0.876 - - 0.741 - TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-040718-283]
75. acot11b ENSDARG00000042122 235 1.616 0.889 - - - - - 0.727 - - acyl-CoA thioesterase 11b [Source:ZFIN;Acc:ZDB-GENE-051127-37]
76. smg7 ENSDARG00000060767 2759 1.615 - - - - 0.889 - - - 0.726 SMG7 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-030131-9122]
77. nt5c2a ENSDARG00000039399 3062 1.612 - - - - - - 0.778 0.834 - 5'-nucleotidase, cytosolic IIa [Source:ZFIN;Acc:ZDB-GENE-030131-3566]
78. ankrd54 ENSDARG00000055743 1575 1.607 0.827 - - - - - 0.780 - - ankyrin repeat domain 54 [Source:ZFIN;Acc:ZDB-GENE-040718-318]
79. itgb4 ENSDARG00000028507 2568 1.606 0.891 - - - - - 0.715 - - integrin, beta 4 [Source:ZFIN;Acc:ZDB-GENE-030131-7209]
80. ACTR3 ENSDARG00000091138 1739 1.605 0.791 0.814 - - - - - - - ARP3 actin related protein 3 homolog [Source:ZFIN;Acc:ZDB-GENE-040428-2]
81. TNRC6C_1 TNRC6C_1 6574 1.604 - 0.785 0.819 - - - - - -
82. gpr161 ENSDARG00000055659 454 1.603 - - - 0.748 0.855 - - - - G protein-coupled receptor 161 [Source:ZFIN;Acc:ZDB-GENE-030616-58]
83. nr2f1a ENSDARG00000052695 5037 1.603 - - 0.901 - - - - - 0.702 nuclear receptor subfamily 2, group F, member 1a [Source:ZFIN;Acc:ZDB-GENE-980526-115]
84. brd7 ENSDARG00000008380 3654 1.602 - - - - 0.888 0.714 - - - bromodomain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2687]
85. map2k4b ENSDARG00000077177 1869 1.602 - 0.740 - - 0.862 - - - - mitogen-activated protein kinase kinase 4b [Source:ZFIN;Acc:ZDB-GENE-080721-13]
86. axin2 ENSDARG00000100149 4223 1.601 - 0.740 0.861 - - - - - - axin 2 (conductin, axil) [Source:ZFIN;Acc:ZDB-GENE-000403-2]
87. smarce1 ENSDARG00000016871 9628 1.599 0.816 - - - 0.783 - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
88. prkag1 ENSDARG00000003818 2800 1.598 0.749 - - - - - - 0.849 - protein kinase, AMP-activated, gamma 1 non-catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040426-2188]
89. pnisr ENSDARG00000069855, ENSDARG00000116449 3465 1.597 - - 0.879 - - - - - 0.718 PNN-interacting serine/arginine-rich protein [Source:ZFIN;Acc:ZDB-GENE-030131-362]
90. hnrnpk ENSDARG00000018914 8841 1.597 - - 0.857 - - - 0.740 - - heterogeneous nuclear ribonucleoprotein K [Source:ZFIN;Acc:ZDB-GENE-040426-1926]
91. fzd1 ENSDARG00000106062 1581 1.597 - - - - 0.866 - - - 0.731 frizzled class receptor 1 [Source:ZFIN;Acc:ZDB-GENE-990415-219]
92. ccz1 ENSDARG00000056559, ENSDARG00000109877 2629 1.597 - 0.745 - - - - - 0.852 - CCZ1 homolog, vacuolar protein trafficking and biogenesis associated [Source:ZFIN;Acc:ZDB-GENE-040426-698]
93. slc20a1b ENSDARG00000010641 2564 1.597 0.895 0.702 - - - - - - - solute carrier family 20 (phosphate transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-260]
94. dut ENSDARG00000106529 3120 1.596 - 0.746 0.850 - - - - - - deoxyuridine triphosphatase [Source:ZFIN;Acc:ZDB-GENE-041010-93]
95. rgl1 ENSDARG00000005989, ENSDARG00000114367 2501 1.593 - - - - - - 0.725 0.868 - ral guanine nucleotide dissociation stimulator-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1816]
96. srsf9 ENSDARG00000008097 2405 1.593 0.842 - - 0.751 - - - - - serine/arginine-rich splicing factor 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2397]
97. top2a ENSDARG00000024488 4273 1.592 - - - - - - - 0.853 0.739 DNA topoisomerase II alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2453]
98. pbx2 ENSDARG00000019717 6892 1.592 - - 0.751 - 0.841 - - - - pre-B-cell leukemia homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-000405-5]
99. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 1.59 - 0.719 0.871 - - - - - - ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
100. emc7 ENSDARG00000012144 1608 1.59 0.878 - - - - - 0.712 - - ER membrane protein complex subunit 7 [Source:ZFIN;Acc:ZDB-GENE-041001-170]

There are 1861 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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