Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-160e1.5

Gene Name Gene ID Reads Annotation
si:ch211-160e1.5 5586 si:ch211-160e1.5










Genes with expression patterns similar to si:ch211-160e1.5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-160e1.5 5586 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-160e1.5
2. pdlim5b ENSDARG00000027600 4252 2.96 - 0.975 - - - 0.994 0.991 - - PDZ and LIM domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-908]
3. gcn1l1 gcn1l1 6031 1.982 - - - - - 0.990 0.992 - -
4. BRCC3 ENSDARG00000098242 1123 1.969 - 0.978 - - - 0.991 - - - BRCA1/BRCA2-containing complex, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-100215-1]
5. wdr5 ENSDARG00000016903 4834 1.961 - 0.972 - - - 0.989 - - - WD repeat domain 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2082]
6. PSIP1 PSIP1 5252 1.955 - 0.967 - - - 0.988 - - -
7. atp6ap1b ENSDARG00000037153 3970 1.951 - 0.960 - - - - 0.991 - - ATPase H+ transporting accessory protein 1b [Source:ZFIN;Acc:ZDB-GENE-020423-2]
8. rtf1 ENSDARG00000008947 6596 1.945 - 0.954 - - - - 0.991 - - RTF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-6778]
9. snrpc ENSDARG00000009871 9567 1.882 - 0.926 - - - 0.956 - - - small nuclear ribonucleoprotein polypeptide C [Source:ZFIN;Acc:ZDB-GENE-020419-26]
10. padi2 ENSDARG00000044167 6765 1.874 - 0.957 - - - 0.917 - - - peptidyl arginine deiminase, type II [Source:ZFIN;Acc:ZDB-GENE-031116-67]
11. marcksl1a ENSDARG00000039034 37303 1.838 - - - - - 0.874 0.964 - - MARCKS-like 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2146]
12. capn2b ENSDARG00000055592 5431 1.79 - 0.965 - - - - - - 0.825 calpain 2, (m/II) large subunit b [Source:ZFIN;Acc:ZDB-GENE-050522-84]
13. ociad1 ENSDARG00000052334 2797 1.772 - 0.780 - - - 0.992 - - - OCIA domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1100]
14. hnrpdl 14288 1.756 - 0.852 - - - 0.904 - - - heterogeneous nuclear ribonucleoprotein D-like, transcript variant X2
15. dct ENSDARG00000006008 2466 1.74 - - - - - 0.749 0.991 - - dopachrome tautomerase [Source:ZFIN;Acc:ZDB-GENE-000508-1]
16. atp5h 18018 1.713 - - - - - - 0.977 - 0.736 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d, transcript variant X1
17. zgc:112484 zgc:112484 780 1.702 - - - - - 0.988 - - 0.714
18. fam20a ENSDARG00000079486 1199 1.7 0.722 0.978 - - - - - - - family with sequence similarity 20, member A [Source:ZFIN;Acc:ZDB-GENE-081022-117]
19. esrp1 ENSDARG00000011245 2097 1.695 - 0.955 - - - - - - 0.740 epithelial splicing regulatory protein 1 [Source:ZFIN;Acc:ZDB-GENE-070112-1732]
20. si:dkey-193b15.6 si:dkey-193b15.6 1340 1.684 - 0.959 - - - - - - 0.725
21. prkar2aa ENSDARG00000033184 14704 1.683 - - - - - - 0.934 - 0.749 protein kinase, cAMP-dependent, regulatory, type II, alpha A [Source:ZFIN;Acc:ZDB-GENE-030131-1007]
22. stxbp5b ENSDARG00000029234 760 1.682 - 0.971 - - - - - - 0.711 syntaxin binding protein 5b (tomosyn) [Source:ZFIN;Acc:ZDB-GENE-090821-5]
23. im:7136729 im:7136729 1625 1.669 - 0.967 - - - - - - 0.702
24. CABZ01059390.1 CABZ01059390.1 4340 1.653 - 0.902 0.751 - - - - - -
25. col1a2 ENSDARG00000020007 36228 1.627 - 0.858 - - - 0.769 - - - collagen, type I, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8415]
26. SNORD72 SNORD72 4018 0.999 - - - - - - 0.999 - -
27. sgms1 ENSDARG00000029621 6376 0.999 - - - - - - 0.999 - - sphingomyelin synthase 1 [Source:ZFIN;Acc:ZDB-GENE-061103-295]
28. ctsf ENSDARG00000063095 4564 0.994 - - - - - 0.994 - - - cathepsin F [Source:ZFIN;Acc:ZDB-GENE-030131-9831]
29. si:dkey-11e23.5 si:dkey-11e23.5 3464 0.993 - - - - - 0.993 - - -
30. bet1 ENSDARG00000034885, ENSDARG00000113480 3627 0.993 - - - - - 0.993 - - - Bet1 golgi vesicular membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-040625-3]
31. stxbp3 ENSDARG00000008142 2604 0.993 - - - - - 0.993 - - - syntaxin binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2833]
32. rcan2 ENSDARG00000021869 874 0.993 - - - - - 0.993 - - - regulator of calcineurin 2 [Source:ZFIN;Acc:ZDB-GENE-040516-17]
33. rfxap ENSDARG00000076891 1299 0.992 - - - - - - 0.992 - - regulatory factor X-associated protein [Source:ZFIN;Acc:ZDB-GENE-091204-321]
34. slc4a2b ENSDARG00000052330 1900 0.992 - - - - - - 0.992 - - solute carrier family 4 (anion exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-030429-14]
35. plagl2 ENSDARG00000076657 2057 0.992 - - - - - - 0.992 - - pleiomorphic adenoma gene-like 2 [Source:ZFIN;Acc:ZDB-GENE-020806-1]
36. VPS37C ENSDARG00000031836 906 0.992 - - - - - 0.992 - - - vacuolar protein sorting 37 homolog C (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-061110-126]
37. FAT1 FAT1 689 0.992 - - - - - - 0.992 - -
38. pinx1 ENSDARG00000023532 4452 0.992 - - - - - - 0.992 - - PIN2 (TERF1) interacting telomerase inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-030515-2]
39. plcd1b ENSDARG00000034080 4074 0.992 - - - - - 0.992 - - - phospholipase C, delta 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9435]
40. fam160a1 fam160a1 1445 0.992 - - - - - - 0.992 - -
41. CR847934.1 CR847934.1 2658 0.992 - - - - - - 0.992 - -
42. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 0.992 - - - - - - 0.992 - - zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
43. rab1ba ENSDARG00000058044 5080 0.992 - - - - - 0.992 - - - zRAB1B, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-040426-873]
44. TSG101 TSG101 1686 0.992 - - - - - - 0.992 - -
45. rif1 ENSDARG00000062650, ENSDARG00000110568 1751 0.992 - - - - - - 0.992 - - replication timing regulatory factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3406]
46. hoxc10a ENSDARG00000070348 2323 0.992 - - - - - - 0.992 - - homeobox C10a [Source:ZFIN;Acc:ZDB-GENE-990415-110]
47. NDUFB2 ENSDARG00000045490 9141 0.992 - - - - - - 0.992 - - NADH:ubiquinone oxidoreductase subunit B2 [Source:ZFIN;Acc:ZDB-GENE-040426-1762]
48. LMLN ENSDARG00000061265 1618 0.992 - - - - - - 0.992 - - leishmanolysin-like (metallopeptidase M8 family) [Source:ZFIN;Acc:ZDB-GENE-081104-298]
49. pcif1 ENSDARG00000099084 2851 0.992 - - - - - - 0.992 - - PDX1 C-terminal inhibiting factor 1 [Source:ZFIN;Acc:ZDB-GENE-120920-2]
50. cenpf ENSDARG00000055133 5267 0.992 - - - - - - 0.992 - - centromere protein F [Source:ZFIN;Acc:ZDB-GENE-041111-205]
51. ttll4 ENSDARG00000078935 1663 0.992 - - - - - - 0.992 - - tubulin tyrosine ligase-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-070912-313]
52. si:dkey-29j8.3 1288 0.992 - - - - - 0.992 - - - si:dkey-29j8.3, transcript variant X2
53. lhfpl2b_1 ENSDARG00000098153 1596 0.992 - - - - - - 0.992 - - LHFPL tetraspan subfamily member 2b [Source:ZFIN;Acc:ZDB-GENE-050417-10]
54. thumpd3 ENSDARG00000059634, ENSDARG00000113066 7065 0.992 - - - - - - 0.992 - - THUMP domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9745]
55. si:dkey-184p9.7 ENSDARG00000092726 2679 0.992 - - - - - - 0.992 - - si:dkey-184p9.7 [Source:ZFIN;Acc:ZDB-GENE-091204-97]
56. CCNA2 ENSDARG00000011094 3996 0.992 - - - - - - 0.992 - - cyclin A2 [Source:ZFIN;Acc:ZDB-GENE-020418-1]
57. oafa ENSDARG00000075851 2015 0.992 - - - - - - 0.992 - - OAF homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-090917-1]
58. cx44.1 cx44.1 799 0.992 - - - - - - 0.992 - -
59. slc7a4 ENSDARG00000068286 1693 0.992 - - - - - - 0.992 - - solute carrier family 7, member 4 [Source:ZFIN;Acc:ZDB-GENE-030919-2]
60. PREX2 ENSDARG00000071692 827 0.992 - - - - - - 0.992 - - phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2 [Source:ZFIN;Acc:ZDB-GENE-091113-37]
61. pdgfaa ENSDARG00000109371, ENSDARG00000110069, ENSDARG00000115665 2120 0.992 - - - - - 0.992 - - - platelet-derived growth factor alpha polypeptide a [Source:ZFIN;Acc:ZDB-GENE-030918-2]
62. CR388095.3 CR388095.3 2548 0.991 - - - - - - 0.991 - -
63. alcamb ENSDARG00000058538 5672 0.991 - - - - - - 0.991 - - activated leukocyte cell adhesion molecule b [Source:ZFIN;Acc:ZDB-GENE-030131-1768]
64. ptp4a2 ptp4a2 3196 0.991 - - - - - 0.991 - - -
65. ube2v1 ENSDARG00000041875 5739 0.991 - - - - - 0.991 - - - ubiquitin-conjugating enzyme E2 variant 1 [Source:ZFIN;Acc:ZDB-GENE-051030-102]
66. olfml2a ENSDARG00000005648 1157 0.991 - - - - - 0.991 - - - olfactomedin-like 2A [Source:ZFIN;Acc:ZDB-GENE-081105-107]
67. imp4 ENSDARG00000054540 1396 0.991 - - - - - 0.991 - - - IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-474]
68. GPR108 ENSDARG00000096651 1734 0.991 - - - - - 0.991 - - - G protein-coupled receptor 108 [Source:ZFIN;Acc:ZDB-GENE-121214-129]
69. ryr1a ENSDARG00000011422 2377 0.991 - - - - - - 0.991 - - ryanodine receptor 1a (skeletal) [Source:ZFIN;Acc:ZDB-GENE-020108-2]
70. SNORD33 SNORD33 3284 0.991 - - - - - - 0.991 - -
71. sf3b4 ENSDARG00000018574 7470 0.991 - - - - - 0.991 - - - splicing factor 3b, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-020419-22]
72. si:dkey-3d4.3 ENSDARG00000074079 365 0.991 - - - - - 0.991 - - - si:dkey-3d4.3 [Source:ZFIN;Acc:ZDB-GENE-070912-527]
73. abat ENSDARG00000006031 2143 0.991 - - - - - 0.991 - - - 4-aminobutyrate aminotransferase [Source:ZFIN;Acc:ZDB-GENE-031006-4]
74. rnd3a ENSDARG00000076799 4705 0.991 - - - - - - 0.991 - - Rho family GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-010319-40]
75. tmco1 ENSDARG00000069099, ENSDARG00000113013 4698 0.991 - - - - - - 0.991 - - transmembrane and coiled-coil domains 1 [Source:ZFIN;Acc:ZDB-GENE-050417-344]
76. ABHD12B ABHD12B 1877 0.991 - - - - - - 0.991 - -
77. hbbe2 ENSDARG00000045143, ENSDARG00000109554 5244 0.991 - - - - - - 0.991 - - hemoglobin beta embryonic-2 [Source:ZFIN;Acc:ZDB-GENE-040702-1]
78. fam32al fam32al 5716 0.991 - - - - - 0.991 - - -
79. si:ch211-208h7.4 si:ch211-208h7.4 1334 0.991 - - - - - 0.991 - - -
80. lepre1 lepre1 5346 0.991 - - - - - - 0.991 - -
81. ide ENSDARG00000075570 4331 0.991 - - - - - 0.991 - - - insulin-degrading enzyme [Source:ZFIN;Acc:ZDB-GENE-070410-85]
82. lap3 ENSDARG00000061981 1188 0.99 - - - - - 0.990 - - - leucine aminopeptidase 3 [Source:ZFIN;Acc:ZDB-GENE-060719-1]
83. hdac9b ENSDARG00000056642 1148 0.99 - - - - - 0.990 - - - histone deacetylase 9b [Source:ZFIN;Acc:ZDB-GENE-040109-7]
84. mst4 mst4 1672 0.99 - - - - - 0.990 - - -
85. SMARCA1 ENSDARG00000012776 673 0.99 - - - - - 0.990 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Source:ZFIN;Acc:ZDB-GENE-070705-296]
86. tfg ENSDARG00000003641, ENSDARG00000115188 3834 0.99 - - - - - 0.990 - - - trk-fused gene [Source:ZFIN;Acc:ZDB-GENE-030131-8410]
87. PROSER1 ENSDARG00000086302 1935 0.99 - - - - - 0.990 - - - proline and serine rich 1 [Source:ZFIN;Acc:ZDB-GENE-111003-1]
88. kdrl ENSDARG00000105215 766 0.99 - - - - - 0.990 - - - kinase insert domain receptor like [Source:ZFIN;Acc:ZDB-GENE-000705-1]
89. tmem134 ENSDARG00000024828 3241 0.99 - - - - - 0.990 - - - transmembrane protein 134 [Source:ZFIN;Acc:ZDB-GENE-040426-1345]
90. wwp2 ENSDARG00000061345 3459 0.99 - - - - - - 0.990 - - WW domain containing E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-000607-82]
91. CASKIN2_1 CASKIN2_1 2299 0.99 - - - - - 0.990 - - -
92. pgm2 ENSDARG00000018178 985 0.99 - - - - - 0.990 - - - phosphoglucomutase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2218]
93. pbxip1b ENSDARG00000011824 3726 0.99 - - - - - 0.990 - - - pre-B-cell leukemia homeobox interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2032]
94. vac14 ENSDARG00000014303 941 0.99 - - - - - 0.990 - - - vac14 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040912-82]
95. pank2 ENSDARG00000003311 881 0.99 - - - - - 0.990 - - - pantothenate kinase 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1952]
96. triqk ENSDARG00000076296 1274 0.99 - - - - - 0.990 - - - triple QxxK/R motif containing [Source:ZFIN;Acc:ZDB-GENE-070705-75]
97. yes1 ENSDARG00000005941 3577 0.99 - - - - - 0.990 - - - YES proto-oncogene 1, Src family tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-050126-1]
98. parvaa ENSDARG00000043710 3495 0.99 - - - - - 0.990 - - - parvin, alpha a [Source:ZFIN;Acc:ZDB-GENE-040721-2]
99. FP102157.1 FP102157.1 1096 0.99 - - - - - 0.990 - - -
100. TRIM35_3 TRIM35_3 172 0.989 - - - - - 0.989 - - -

There are 656 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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