Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-160d14.9

Gene Name Gene ID Reads Annotation
si:ch211-160d14.9 8 si:ch211-160d14.9, transcript variant X1










Genes with expression patterns similar to si:ch211-160d14.9

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-160d14.9 8 5 1.000 - - - 1.000 - 1.000 1.000 1.000 si:ch211-160d14.9, transcript variant X1
2. SOX8 SOX8 22 2 1.000 - - - - - 1.000 - -
3. 5S_rRNA_10 5S_rRNA_10 2 2 1.000 - - - - - 1.000 - -
4. F2RL3 ENSDARG00000079399 29 2 1.000 - - - - - 1.000 - - F2R like thrombin or trypsin receptor 3 [Source:HGNC Symbol;Acc:HGNC:3540]
5. ttc22 ENSDARG00000077836 21 1.997 1.000 - - - 0.997 - - - - tetratricopeptide repeat domain 22 [Source:ZFIN;Acc:ZDB-GENE-050208-292]
6. si:ch211-113a14.14_3 si:ch211-113a14.14_3 21 1.982 - - - - 0.982 - - - 1.000
7. rnf17 ENSDARG00000056387, ENSDARG00000113359 36 1.966 1.000 - - - - - 0.966 - - ring finger protein 17 [Source:ZFIN;Acc:ZDB-GENE-030131-6451]
8. dyx1c1 dyx1c1 36 1.927 - - - - - - 0.927 - 1.000
9. ano2 ENSDARG00000101363 50 1.923 1.000 - - - 0.923 - - - - anoctamin 2 [Source:ZFIN;Acc:ZDB-GENE-060503-62]
10. CABZ01069081.1 CABZ01069081.1 16 1.906 1.000 - - - - - 0.906 - -
11. PCMTD2 ENSDARG00000053820, ENSDARG00000113456 25 1.887 1.000 - - - 0.887 - - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060312-14]
12. cacnb2a ENSDARG00000099045 374 1.881 1.000 - - - - - 0.881 - - calcium channel, voltage-dependent, beta 2a [Source:ZFIN;Acc:ZDB-GENE-080808-7]
13. FP565458.1 FP565458.1 61 1.843 1.000 - - - 0.843 - - - -
14. CABZ01081748.1 ENSDARG00000102139 31 1.83 - - - - 0.996 - 0.834 - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100007471]
15. zgc:174700_1 zgc:174700_1 60 1.828 1.000 - - - 0.828 - - - -
16. vipr1b ENSDARG00000059058 62 1.809 1.000 - - - - - 0.809 - - vasoactive intestinal peptide receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050311-6]
17. kcnh3 ENSDARG00000069560 4 1.802 0.802 - - - - - - - 1.000 potassium voltage-gated channel, subfamily H (eag-related), member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-23]
18. si:dkey-13a21.4 ENSDARG00000026098, ENSDARG00000113692 87 1.789 1.000 - - - 0.789 - - - - si:dkey-13a21.4 [Source:ZFIN;Acc:ZDB-GENE-040724-163]
19. ubxn10 ENSDARG00000052535 24 1.766 1.000 - - - - - 0.766 - - UBX domain protein 10 [Source:ZFIN;Acc:ZDB-GENE-060825-319]
20. ARHGAP17 ARHGAP17 29 1.764 1.000 - - - - - 0.764 - -
21. si:dkey-217m5.3 si:dkey-217m5.3 22 1.748 1.000 - - - - - 0.748 - -
22. MARS2 ENSDARG00000009218, ENSDARG00000109472, ENSDARG00000114406 47 1.737 1.000 - - - 0.737 - - - - methionyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-111201-1]
23. nhlrc2 ENSDARG00000089581, ENSDARG00000113639 40 1.733 1.000 - - - - - - - 0.733 NHL repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-100318-2]
24. si:ch211-196n4.5 si:ch211-196n4.5 63 1.714 0.881 - - - - - 0.833 - -
25. si:ch211-207c7.6 si:ch211-207c7.6 23 1.605 0.731 - - - - - 0.874 - -
26. CPNE7 ENSDARG00000102584 95 1.605 0.746 - - - - - 0.859 - - copine VII [Source:ZFIN;Acc:ZDB-GENE-131125-70]
27. chico ENSDARG00000019588 77 1.551 0.746 - - - 0.805 - - - - chico [Source:ZFIN;Acc:ZDB-GENE-000210-28]
28. CR387997.1 CR387997.1 190 1.511 - - - - 0.797 - 0.714 - -
29. slco5a1 slco5a1 383 1.452 0.717 - - - - - 0.735 - -
30. FAM177A1 ENSDARG00000079636 19 1 1.000 - - - - - - - - family with sequence similarity 177, member A1 [Source:ZFIN;Acc:ZDB-GENE-070928-21]
31. ZBED1_5 ZBED1_5 1 1 1.000 - - - - - - - -
32. si:dkeyp-59c12.1 ENSDARG00000038112 186 1 1.000 - - - - - - - - si:dkeyp-59c12.1 [Source:ZFIN;Acc:ZDB-GENE-050419-167]
33. CR388416.3 CR388416.3 1 1 - - - - - - 1.000 - -
34. pla2g4a pla2g4a 7 1 - - - - - - 1.000 - -
35. SNTB2 ENSDARG00000051763 2 1 - - - - - - 1.000 - - syntrophin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-131121-511]
36. SNORA81_1 SNORA81_1 8 1 1.000 - - - - - - - -
37. dnajc28 ENSDARG00000018181, ENSDARG00000114383 134 1 1.000 - - - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 28 [Source:ZFIN;Acc:ZDB-GENE-050417-130]
38. si:ch73-95a24.1 si:ch73-95a24.1 11 1 - - - - - - 1.000 - -
39. cfhl5 ENSDARG00000105052 25 1 1.000 - - - - - - - - complement factor H like 5 [Source:ZFIN;Acc:ZDB-GENE-050208-782]
40. PLCG2 ENSDARG00000068763 11 1 1.000 - - - - - - - - phospholipase C, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9532]
41. si:dkey-27n6.5 23 1 - - - - - - 1.000 - - si:dkey-27n6.5
42. si:ch211-150o23.4 si:ch211-150o23.4 7 1 - - - - - - 1.000 - -
43. zgc:174356 ENSDARG00000088263, ENSDARG00000116818 6 1 - - - - - - 1.000 - - zgc:174356 [Source:ZFIN;Acc:ZDB-GENE-080215-21]
44. GLB1L2 ENSDARG00000034941 74 1 1.000 - - - - - - - - galactosidase beta 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25129]
45. C6H3orf18 C6H3orf18 7 1 - - - - - - - - 1.000
46. si:dkeyp-70f9.7 ENSDARG00000042663 1 1 - - - - - - 1.000 - - si:dkeyp-70f9.7 [Source:ZFIN;Acc:ZDB-GENE-070705-550]
47. impdh1a ENSDARG00000042336, ENSDARG00000115253, ENSDARG00000116322 67 1 1.000 - - - - - - - - IMP (inosine 5'-monophosphate) dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-040704-15]
48. ZNF648 ENSDARG00000104823 194 1 - - - - - - 1.000 - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
49. si:ch211-254p10.2 ENSDARG00000056750 3 1 - - - - - - 1.000 - - si:ch211-254p10.2 [Source:ZFIN;Acc:ZDB-GENE-100922-17]
50. FP015791.1 FP015791.1 90 1 1.000 - - - - - - - -
51. GPR116_3 GPR116_3 9 1 1.000 - - - - - - - -
52. slc34a1b ENSDARG00000054658 1 1 - - - - - - 1.000 - - solute carrier family 34 (type II sodium/phosphate cotransporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-101006-4]
53. crtac1a ENSDARG00000059826 22 1 1.000 - - - - - - - - cartilage acidic protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9704]
54. ENSDARG00000089437 ENSDARG00000089437 0 1 - - - - - - - - 1.000
55. GBF1 ENSDARG00000027016 30 1 - - - - - - 1.000 - - golgi brefeldin A resistant guanine nucleotide exchange factor 1 [Source:ZFIN;Acc:ZDB-GENE-081107-54]
56. cyp4f3 ENSDARG00000053530 10 1 1.000 - - - - - - - - cytochrome P450, family 4, subfamily F, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-070410-108]
57. dock11 ENSDARG00000062485 17 1 - - - - - - 1.000 - - dedicator of cytokinesis 11 [Source:ZFIN;Acc:ZDB-GENE-060503-196]
58. dnah7 ENSDARG00000060165 21 1 - - - - - - 1.000 - - dynein, axonemal, heavy chain 7 [Source:ZFIN;Acc:ZDB-GENE-070912-282]
59. lyve1b ENSDARG00000062483 14 1 1.000 - - - - - - - - lymphatic vessel endothelial hyaluronic receptor 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9516]
60. PLCXD2 ENSDARG00000058200 8 1 - - - - - - - - 1.000 phosphatidylinositol-specific phospholipase C, X domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-091204-217]
61. si:ch211-234c11.3_1 ENSDARG00000093615 10 1 1.000 - - - - - - - - si:ch211-234c11.3 [Source:ZFIN;Acc:ZDB-GENE-110914-93]
62. BX324142.1 ENSDARG00000114711 1 1 1.000 - - - - - - - - proline-rich receptor-like protein kinase PERK8 [Source:NCBI gene;Acc:101884110]
63. si:dkeyp-4f2.1 ENSDARG00000089304, ENSDARG00000114142 0 1 - - - - - - - - 1.000 si:dkeyp-4f2.1 [Source:ZFIN;Acc:ZDB-GENE-081103-33]
64. COBLL1 COBLL1 14 1 1.000 - - - - - - - -
65. ovca2 ENSDARG00000103748 38 1 1.000 - - - - - - - - OVCA2, serine hydrolase domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-115]
66. si:dkey-267i17.3 si:dkey-267i17.3 4 1 1.000 - - - - - - - -
67. zgc:92658 8 1 1.000 - - - - - - - - zgc:92658
68. znf831 ENSDARG00000074906 0 1 - - - - - - - - 1.000 zinc finger protein 831 [Source:ZFIN;Acc:ZDB-GENE-081022-210]
69. si:ch73-27e22.5 si:ch73-27e22.5 10 1 - - - - - - 1.000 - -
70. pnp4b ENSDARG00000029230 6 1 - - - - - - 1.000 - - purine nucleoside phosphorylase 4b [Source:ZFIN;Acc:ZDB-GENE-040426-1887]
71. fermt3a fermt3a 56 1 1.000 - - - - - - - -
72. SNORD35_2 SNORD35_2 5 1 - - - - - - - - 1.000
73. vtg1 ENSDARG00000092233 1 1 - - - - - - - - 1.000 vitellogenin 1 [Source:ZFIN;Acc:ZDB-GENE-001201-1]
74. wasb ENSDARG00000026350 139 1 - - - - - - 1.000 - - Wiskott-Aldrich syndrome (eczema-thrombocytopenia) b [Source:ZFIN;Acc:ZDB-GENE-030131-7098]
75. lrit1a ENSDARG00000019179 9 1 - - - - - - 1.000 - - leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a [Source:ZFIN;Acc:ZDB-GENE-040924-5]
76. zgc:113274 ENSDARG00000059235, ENSDARG00000116981 19 1 1.000 - - - - - - - - zgc:113274 [Source:ZFIN;Acc:ZDB-GENE-050508-2]
77. si:ch211-113a14.17 15 1 - - - - - - 1.000 - - si:ch211-113a14.17
78. DYNC1H1 ENSDARG00000014717 11 1 - - - - - - - - 1.000 dynein, cytoplasmic 1, heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7050]
79. inpp5jb ENSDARG00000093359 4 1 - - - - - - - - 1.000 inositol polyphosphate-5-phosphatase Jb [Source:ZFIN;Acc:ZDB-GENE-081104-46]
80. cfhl3 ENSDARG00000104205, ENSDARG00000115822 1 1 - - - - - - 1.000 - - complement factor H like 3 [Source:ZFIN;Acc:ZDB-GENE-050208-423]
81. CCDC18 ENSDARG00000078822 5 1 1.000 - - - - - - - - coiled-coil domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-030131-5414]
82. si:dkey-71p21.13 ENSDARG00000076139 1 1 - - - - - - 1.000 - - si:dkey-71p21.13 [Source:ZFIN;Acc:ZDB-GENE-090313-327]
83. si:ch211-73m21.1 ENSDARG00000096491 10 1 - - - - - - 1.000 - - si:ch211-73m21.1 [Source:ZFIN;Acc:ZDB-GENE-120709-61]
84. si:dkey-121j17.5 ENSDARG00000014232 18 1 - - - - - - 1.000 - - si:dkey-121j17.5 [Source:ZFIN;Acc:ZDB-GENE-030131-4745]
85. pvrl4 155 1 - - - - - - 1.000 - - poliovirus receptor-related 4
86. zp2.5 ENSDARG00000086522 15 1 1.000 - - - - - - - - zona pellucida glycoprotein 2, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-090306-1]
87. csrnp1b ENSDARG00000038429 10 1 1.000 - - - - - - - - cysteine-serine-rich nuclear protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1515]
88. rundc3b ENSDARG00000009961 10 1 - - - - - - 1.000 - - RUN domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-041114-121]
89. epb41l3b ENSDARG00000019917 9 1 1.000 - - - - - - - - erythrocyte membrane protein band 4.1-like 3b [Source:ZFIN;Acc:ZDB-GENE-021106-1]
90. slc34a1a ENSDARG00000028824 35 1 - - - - - - 1.000 - - solute carrier family 34 (type II sodium/phosphate cotransporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-101006-3]
91. tacr2 ENSDARG00000074509, ENSDARG00000109849, ENSDARG00000112566 4 1 - - - - - - - - 1.000 tachykinin receptor 2 [Source:ZFIN;Acc:ZDB-GENE-090312-188]
92. CNNM3 0 1 - - - - - - - - 1.000 cyclin and CBS domain divalent metal cation transport mediator 3
93. CABZ01084613.1 CABZ01084613.1 22 1 - - - - - - - - 1.000
94. si:dkeyp-82d1.2 si:dkeyp-82d1.2 11 1 1.000 - - - - - - - -
95. si:dkey-157e10.5 si:dkey-157e10.5 1 1 1.000 - - - - - - - -
96. mir30b 4 1 - - - - - - 1.000 - - microRNA 30b
97. CABZ01028403.1 CABZ01028403.1 48 1 - - - - - - 1.000 - -
98. BX323882.1 ENSDARG00000101656 2 1 - - - - - - - - 1.000 butyrophilin subfamily 2 member A2-like [Source:NCBI gene;Acc:563995]
99. cmlc1 ENSDARG00000032976 455 1 1.000 - - - - - - - - cardiac myosin light chain-1 [Source:ZFIN;Acc:ZDB-GENE-030522-1]
100. BX004964.1 ENSDARG00000097134 1 1 - - - - - - - - 1.000

There are 936 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA