Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-15j21.2

Gene Name Gene ID Reads Annotation
si:ch211-15j21.2 si:ch211-15j21.2 13










Genes with expression patterns similar to si:ch211-15j21.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-15j21.2 si:ch211-15j21.2 13 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. ryr2b ENSDARG00000003706 6 2.412 - 0.906 - 0.799 - - - - 0.707 ryanodine receptor 2b (cardiac) [Source:ZFIN;Acc:ZDB-GENE-061226-3]
3. iqcc ENSDARG00000092483 65 2 - 1.000 - - - - 1.000 - - IQ motif containing C [Source:ZFIN;Acc:ZDB-GENE-090313-325]
4. si:dkey-4c15.13 ENSDARG00000095704 13 1.985 0.985 1.000 - - - - - - - si:dkey-4c15.13 [Source:ZFIN;Acc:ZDB-GENE-030131-2023]
5. gzmk ENSDARG00000028780 1 1.944 - - 1.000 - - - - - 0.944 granzyme K [Source:ZFIN;Acc:ZDB-GENE-091204-352]
6. cyp39a1 ENSDARG00000017982 4 1.944 - - 1.000 - - - - - 0.944 cytochrome P450, family 39, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-041014-339]
7. crp1 ENSDARG00000071454 31 1.908 0.971 0.937 - - - - - - - C-reactive protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-314]
8. sstr3 ENSDARG00000014477 14 1.891 0.985 0.906 - - - - - - - somatostatin receptor 3 [Source:ZFIN;Acc:ZDB-GENE-061009-35]
9. si:ch211-155d24.7 si:ch211-155d24.7 17 1.856 - - 1.000 - - 0.856 - - -
10. C1S ENSDARG00000100599 20 1.85 - 0.906 - - - - - - 0.944 complement component 1, s subcomponent [Source:ZFIN;Acc:ZDB-GENE-030131-1232]
11. CABZ01071909.1 ENSDARG00000117524 2 1.85 - 0.906 - - - - - - 0.944
12. GRID1 GRID1 51 1.826 - 0.826 - - - - 1.000 - -
13. guca1c ENSDARG00000030758 9 1.799 - - 1.000 0.799 - - - - - guanylate cyclase activator 1C [Source:ZFIN;Acc:ZDB-GENE-030829-1]
14. agbl5 ENSDARG00000045900 2 1.792 - - 1.000 - - - - - 0.792 ATP/GTP binding protein-like 5 [Source:ZFIN;Acc:ZDB-GENE-040822-29]
15. BX323876.3 BX323876.3 19 1.784 - - - 0.910 - - - - 0.874
16. pdgfra ENSDARG00000070494, ENSDARG00000113952 6 1.765 - - 0.909 - - 0.856 - - - platelet-derived growth factor receptor, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-208]
17. eif4e1b ENSDARG00000014565 12 1.762 - 0.906 - - - 0.856 - - - eukaryotic translation initiation factor 4E family member 1B [Source:ZFIN;Acc:ZDB-GENE-980526-127]
18. slc25a15a ENSDARG00000063539 50 1.73 - - 1.000 - - - - - 0.730 solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15a [Source:ZFIN;Acc:ZDB-GENE-070112-1072]
19. socs1a ENSDARG00000038095 20 1.722 - - 1.000 - - - 0.722 - - suppressor of cytokine signaling 1a [Source:ZFIN;Acc:ZDB-GENE-040801-205]
20. RECK ENSDARG00000090039 15 1.722 - - 1.000 - - - 0.722 - - reversion-inducing-cysteine-rich protein with kazal motifs [Source:ZFIN;Acc:ZDB-GENE-070117-37]
21. TRIM14_1 TRIM14_1 228 1.703 0.762 0.941 - - - - - - -
22. prodha ENSDARG00000086746 10 1.698 - 0.864 - - - - - - 0.834 proline dehydrogenase (oxidase) 1a [Source:ZFIN;Acc:ZDB-GENE-041008-73]
23. si:dkey-117n7.2 ENSDARG00000093135 40 1.689 - 0.904 - - - - - 0.785 - si:dkey-117n7.2 [Source:ZFIN;Acc:ZDB-GENE-060503-49]
24. bard1 ENSDARG00000076733 40 1.673 0.874 - - 0.799 - - - - - BRCA1 associated RING domain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5883]
25. tlr5a ENSDARG00000044415 3 1.655 - - - 0.799 - 0.856 - - - toll-like receptor 5a [Source:ZFIN;Acc:ZDB-GENE-040219-14]
26. CABZ01016604.1 CABZ01016604.1 12 1.655 - - - 0.799 - 0.856 - - -
27. dcaf5 ENSDARG00000060320 163 1.64 0.896 0.744 - - - - - - - ddb1 and cul4 associated factor 5 [Source:ZFIN;Acc:ZDB-GENE-060929-808]
28. CABZ01048021.1 CABZ01048021.1 15 1.638 - - - 0.916 - - 0.722 - -
29. cdh4_1 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 13 1.638 - 0.906 - - - - - - 0.732 cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
30. zbtb24 ENSDARG00000075533, ENSDARG00000114487 12 1.629 - 0.906 - 0.723 - - - - - zinc finger and BTB domain containing 24 [Source:ZFIN;Acc:ZDB-GENE-081022-123]
31. cacng5a ENSDARG00000003326 17 1.628 - 0.906 - - - - 0.722 - - calcium channel, voltage-dependent, gamma subunit 5a [Source:ZFIN;Acc:ZDB-GENE-120104-4]
32. KLHDC3 ENSDARG00000102772 14 1.628 - 0.906 - - - - 0.722 - - kelch domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2426]
33. themis ENSDARG00000010619 5 1.611 - 0.906 - - 0.705 - - - - thymocyte selection associated [Source:ZFIN;Acc:ZDB-GENE-041008-160]
34. chp1 ENSDARG00000052859 34 1.608 0.702 0.906 - - - - - - - calcineurin-like EF-hand protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4086]
35. FAM163A_1 ENSDARG00000093021 6 1.608 - 0.906 0.702 - - - - - - family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
36. si:dkey-208k4.7 si:dkey-208k4.7 14 1.607 - - - - - 0.856 0.751 - -
37. si:dkey-1j5.4 ENSDARG00000073747 1 1.589 - - - - - - 0.722 0.867 - si:dkey-1j5.4 [Source:ZFIN;Acc:ZDB-GENE-130603-91]
38. HBQ1 HBQ1 413 1.589 - 0.811 - - - 0.778 - - -
39. gpx3 ENSDARG00000043342 101 1.587 - 0.836 - 0.751 - - - - - glutathione peroxidase 3 [Source:ZFIN;Acc:ZDB-GENE-070222-3]
40. prom1b ENSDARG00000034007, ENSDARG00000111216, ENSDARG00000111262 14 1.578 - - - - - 0.856 0.722 - - prominin 1 b [Source:ZFIN;Acc:ZDB-GENE-031003-1]
41. vmhcl 119 1.573 - - - 0.742 - - - - 0.831 ventricular myosin heavy chain-like
42. tcf3a ENSDARG00000005915 12 1.547 - 0.826 - 0.721 - - - - - transcription factor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-51]
43. si:dkeyp-69b9.2 si:dkeyp-69b9.2 25 1.542 - 0.743 - 0.799 - - - - -
44. nkx2.5 ENSDARG00000018004, ENSDARG00000116714 23 1.525 - - - 0.771 - - - - 0.754 NK2 homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-321]
45. nudt22 ENSDARG00000071671 411 1.525 0.770 0.755 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 22 [Source:ZFIN;Acc:ZDB-GENE-041010-171]
46. gpr155a ENSDARG00000090804 27 1.521 - - - 0.799 - - 0.722 - - G protein-coupled receptor 155a [Source:ZFIN;Acc:ZDB-GENE-100922-89]
47. zgc:173716 9 1.457 - - 0.735 - - - 0.722 - - zgc:173716
48. TXNRD2 TXNRD2 14 1.453 - - - - - - 0.722 - 0.731
49. cmlc1 ENSDARG00000032976 455 1.428 - - - - - - 0.722 - 0.706 cardiac myosin light chain-1 [Source:ZFIN;Acc:ZDB-GENE-030522-1]
50. slc34a1a ENSDARG00000028824 35 1 - - 1.000 - - - - - - solute carrier family 34 (type II sodium/phosphate cotransporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-101006-3]
51. smchd1 ENSDARG00000104374 0 1 - - 1.000 - - - - - - structural maintenance of chromosomes flexible hinge domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050211-6]
52. si:ch1073-221c23.2 si:ch1073-221c23.2 17 1 - - 1.000 - - - - - -
53. mxf ENSDARG00000026049 195 1 - - - - - - 1.000 - - myxovirus (influenza virus) resistance F [Source:ZFIN;Acc:ZDB-GENE-030721-9]
54. SMCHD1 ENSDARG00000104374 2 1 - - 1.000 - - - - - - structural maintenance of chromosomes flexible hinge domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050211-6]
55. si:dkey-157e10.7 si:dkey-157e10.7 105 1 - 1.000 - - - - - - -
56. UBE2O 1 1 - - 1.000 - - - - - - ubiquitin-conjugating enzyme E2O
57. SLC22A14 SLC22A14 24 1 - - 1.000 - - - - - -
58. PEG3_8 PEG3_8 1 1 - - 1.000 - - - - - -
59. si:ch211-284f7.1 si:ch211-284f7.1 1 1 - - 1.000 - - - - - -
60. kcnh8 ENSDARG00000062640 10 1 - - 1.000 - - - - - - potassium voltage-gated channel, subfamily H (eag-related), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-204]
61. CABZ01079192.1 ENSDARG00000101629 23 1 - - 1.000 - - - - - - sucrase-isomaltase (alpha-glucosidase) [Source:NCBI gene;Acc:100148922]
62. n6amt2 7 1 - - 1.000 - - - - - - N-6 adenine-specific DNA methyltransferase 2 (putative), transcript variant X1
63. CU694385.1 CU694385.1 1 1 - - 1.000 - - - - - -
64. AL929092.1_1 ENSDARG00000092217 3 1 - - 1.000 - - - - - -
65. zgc:171506 ENSDARG00000078206, ENSDARG00000112252 3 1 - - - - - 1.000 - - - zgc:171506 [Source:ZFIN;Acc:ZDB-GENE-080204-96]
66. si:ch211-149b19.2 ENSDARG00000088882 28 1 - - - - - 1.000 - - - si:ch211-149b19.2 [Source:ZFIN;Acc:ZDB-GENE-110411-60]
67. ZNF70 ZNF70 2 1 - - 1.000 - - - - - -
68. DXO ENSDARG00000036852 16 1 - - 1.000 - - - - - - decapping exoribonuclease [Source:HGNC Symbol;Acc:HGNC:2992]
69. DIAPH2 ENSDARG00000076060 1 1 - - 1.000 - - - - - - diaphanous-related formin 2 [Source:ZFIN;Acc:ZDB-GENE-090115-1]
70. CABZ01077220.1 ENSDARG00000088198 0 1 - - 1.000 - - - - - -
71. LRRC3C LRRC3C 0 1 - - 1.000 - - - - - -
72. si:dkey-15j16.3 ENSDARG00000042683 2 1 - - 1.000 - - - - - - si:dkey-15j16.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4680]
73. SNORD12 SNORD12 1 1 - - 1.000 - - - - - -
74. srd5a2a ENSDARG00000043587 21 1 - - 1.000 - - - - - - steroid-5-alpha-reductase, alpha polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-050417-199]
75. si:ch211-281g2.3 si:ch211-281g2.3 1 1 - - 1.000 - - - - - -
76. si:ch73-383o19.2 si:ch73-383o19.2 3 1 - - 1.000 - - - - - -
77. POLR2E POLR2E 1 1 - - 1.000 - - - - - -
78. myo7bb ENSDARG00000077201 7 1 - - 1.000 - - - - - - myosin VIIBb [Source:ZFIN;Acc:ZDB-GENE-070912-482]
79. ca5 ca5 1 1 - - 1.000 - - - - - -
80. si:dkey-56m15.6 ENSDARG00000093461 1 1 - - - - - - - - 1.000 si:dkey-56m15.6 [Source:ZFIN;Acc:ZDB-GENE-110914-102]
81. MFAP4_5 MFAP4_5 4 1 - - 1.000 - - - - - -
82. gpr84 ENSDARG00000077308, ENSDARG00000111475 93 1 - - 1.000 - - - - - - G protein-coupled receptor 84 [Source:ZFIN;Acc:ZDB-GENE-070928-33]
83. acoxl ENSDARG00000020149 14 1 - - 1.000 - - - - - - acyl-CoA oxidase-like [Source:ZFIN;Acc:ZDB-GENE-081107-18]
84. si:dkey-40j3.3 ENSDARG00000103597 5 1 - - 1.000 - - - - - - si:dkey-40j3.3 [Source:ZFIN;Acc:ZDB-GENE-110913-109]
85. hnf1a ENSDARG00000009470 60 1 - 1.000 - - - - - - - HNF1 homeobox a [Source:ZFIN;Acc:ZDB-GENE-021206-12]
86. dennd6aa ENSDARG00000030239 1 1 - - 1.000 - - - - - - DENN/MADD domain containing 6Aa [Source:ZFIN;Acc:ZDB-GENE-041010-63]
87. SMU1 SMU1 3 1 - - 1.000 - - - - - -
88. CABZ01024686.1 CABZ01024686.1 1 1 - - 1.000 - - - - - -
89. si:ch211-131e11.20 si:ch211-131e11.20 0 1 - - 1.000 - - - - - -
90. si:dkey-32n7.4 ENSDARG00000002956 3 1 - - 1.000 - - - - - - si:dkey-32n7.4 [Source:ZFIN;Acc:ZDB-GENE-110411-175]
91. si:ch211-155e24.2 si:ch211-155e24.2 0 1 - - 1.000 - - - - - -
92. MYO7B MYO7B 8 1 - - - - - 1.000 - - -
93. si:ch73-379f7.5 si:ch73-379f7.5 1 1 - - 1.000 - - - - - -
94. il2rgb ENSDARG00000053702 0 1 - - 1.000 - - - - - - interleukin 2 receptor, gamma b [Source:ZFIN;Acc:ZDB-GENE-080402-2]
95. si:dkey-200l5.4 ENSDARG00000095294 13 1 - - 1.000 - - - - - - si:dkey-200l5.4 [Source:ZFIN;Acc:ZDB-GENE-091204-393]
96. MCC ENSDARG00000105237 4 1 - - 1.000 - - - - - - MCC, WNT signaling pathway regulator [Source:ZFIN;Acc:ZDB-GENE-141210-1]
97. si:dkey-256e21.1 si:dkey-256e21.1 11 1 - - 1.000 - - - - - -
98. CU459095.1 CU459095.1 7 1 - 1.000 - - - - - - -
99. si:ch211-119o8.8 si:ch211-119o8.8 0 1 - - 1.000 - - - - - -
100. ms4a17a.6 ENSDARG00000007018 6 1 - - 1.000 - - - - - - membrane-spanning 4-domains, subfamily A, member 17A.6 [Source:ZFIN;Acc:ZDB-GENE-070209-265]

There are 1231 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA