Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-158c3.1

Gene Name Gene ID Reads Annotation
si:ch211-158c3.1 si:ch211-158c3.1 37










Genes with expression patterns similar to si:ch211-158c3.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-158c3.1 si:ch211-158c3.1 37 7 - 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000
2. zgc:175008 zgc:175008 55 1.679 - - 0.863 - - - 0.816 - -
3. napepld ENSDARG00000009252 228 1.601 - - 0.850 - 0.751 - - - - N-acyl phosphatidylethanolamine phospholipase D [Source:ZFIN;Acc:ZDB-GENE-030131-3856]
4. fgd6 ENSDARG00000045528 224 1.552 - 0.802 - - - - 0.750 - - FYVE, RhoGEF and PH domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-041210-200]
5. si:dkey-204f11.49p si:dkey-204f11.49p 97 1.504 - - 0.704 - - - 0.800 - -
6. ttc12 ENSDARG00000056896 97 0.978 - - 0.978 - - - - - - tetratricopeptide repeat domain 12 [Source:ZFIN;Acc:ZDB-GENE-071016-4]
7. ENSDARG00000089996 ENSDARG00000089996 17 0.97 - - 0.970 - - - - - -
8. si:dkey-285e18.5 ENSDARG00000093665 5 0.97 - - 0.970 - - - - - - si:dkey-285e18.5 [Source:ZFIN;Acc:ZDB-GENE-120703-44]
9. si:ch1073-312b22.1 si:ch1073-312b22.1 6 0.97 - - 0.970 - - - - - -
10. Metazoa_SRP_13 Metazoa_SRP_13 7 0.97 - - 0.970 - - - - - -
11. si:ch211-188c16.1 ENSDARG00000077288 16 0.969 - - 0.969 - - - - - - si:ch211-188c16.1 [Source:ZFIN;Acc:ZDB-GENE-070912-162]
12. radil ENSDARG00000079779 14 0.969 - - 0.969 - - - - - - Ras association and DIL domains [Source:ZFIN;Acc:ZDB-GENE-071206-1]
13. tecrl2a ENSDARG00000089485 12 0.969 - - 0.969 - - - - - - trans-2,3-enoyl-CoA reductase-like 2a [Source:ZFIN;Acc:ZDB-GENE-131121-138]
14. ddx43 ENSDARG00000022614 48 0.969 - - 0.969 - - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 [Source:ZFIN;Acc:ZDB-GENE-080204-77]
15. si:ch211-154o6.3_1 ENSDARG00000099846, ENSDARG00000112144 10 0.967 - - 0.967 - - - - - - si:ch211-154o6.3 [Source:ZFIN;Acc:ZDB-GENE-030131-1030]
16. si:ch211-283e2.7 19 0.966 - - 0.966 - - - - - - si:ch211-283e2.7, transcript variant X2
17. si:dkey-17e16.18 47 0.965 - - 0.965 - - - - - - si:dkey-17e16.18
18. fut7 ENSDARG00000044775 25 0.964 - - 0.964 - - - - - - fucosyltransferase 7 (alpha (1,3) fucosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-060929-997]
19. ppp1r3da ENSDARG00000077513 109 0.964 - - 0.964 - - - - - - protein phosphatase 1, regulatory subunit 3Da [Source:ZFIN;Acc:ZDB-GENE-080204-75]
20. cdc14aa ENSDARG00000013858 18 0.96 - - 0.960 - - - - - - cell division cycle 14Aa [Source:ZFIN;Acc:ZDB-GENE-040426-1214]
21. wfikkn2b ENSDARG00000059139 45 0.958 - - 0.958 - - - - - - WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-110414-1]
22. TEKT4 ENSDARG00000028899 47 0.957 - - 0.957 - - - - - - tektin 4 [Source:ZFIN;Acc:ZDB-GENE-070410-98]
23. si:dkey-176f19.5 si:dkey-176f19.5 10 0.956 - - 0.956 - - - - - -
24. stx11b.2 ENSDARG00000042231, ENSDARG00000110079 68 0.956 - - 0.956 - - - - - - syntaxin 11b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-050417-148]
25. trim37 ENSDARG00000076473 115 0.955 - 0.955 - - - - - - - tripartite motif containing 37 [Source:ZFIN;Acc:ZDB-GENE-030131-2957]
26. tbx6 ENSDARG00000011785 132 0.952 - - 0.952 - - - - - - T-box 6 [Source:ZFIN;Acc:ZDB-GENE-020416-5]
27. NBL1 428 0.95 - - 0.950 - - - - - - neuroblastoma 1, DAN family BMP antagonist
28. mycbpap ENSDARG00000069194 32 0.95 - - 0.950 - - - - - - mycbp associated protein [Source:ZFIN;Acc:ZDB-GENE-080923-1]
29. cdc73 ENSDARG00000020201 22 0.948 - 0.948 - - - - - - - cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1309]
30. BX469922.1 BX469922.1 133 0.946 - - 0.946 - - - - - -
31. npffr2.1 npffr2.1 60 0.946 - - 0.946 - - - - - -
32. FAM135B ENSDARG00000105121 207 0.941 - 0.941 - - - - - - - family with sequence similarity 135 member B [Source:HGNC Symbol;Acc:HGNC:28029]
33. psmb5 ENSDARG00000075445, ENSDARG00000111880 126 0.941 - 0.941 - - - - - - - proteasome subunit beta 5 [Source:ZFIN;Acc:ZDB-GENE-990415-215]
34. bmb ENSDARG00000096603 120 0.94 - - - - - - 0.940 - - brambleberry [Source:ZFIN;Acc:ZDB-GENE-030131-5577]
35. zgc:153157 ENSDARG00000070423, ENSDARG00000115488 79 0.939 - - 0.939 - - - - - - zgc:153157 [Source:ZFIN;Acc:ZDB-GENE-060825-224]
36. si:dkey-113d16.9 si:dkey-113d16.9 345 0.937 - - 0.937 - - - - - -
37. si:dkey-176f19.1 ENSDARG00000101463 27 0.937 - - 0.937 - - - - - - si:dkey-176f19.1 [Source:ZFIN;Acc:ZDB-GENE-110914-124]
38. CR936977.1 ENSDARG00000100144 4 0.932 - - - - - - - 0.932 -
39. zgc:114037_3 17 0.932 - - - - - - - 0.932 - zgc:114037
40. FKBP15 FKBP15 15 0.932 - - - - - - - 0.932 -
41. U6_25 U6_25 2 0.932 - - - - - - - 0.932 -
42. CU633479.6 ENSDARG00000116146 4 0.932 - - - - - - - 0.932 -
43. dmrt1 ENSDARG00000007349 16 0.932 - - - - - - - 0.932 - doublesex and mab-3 related transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050511-1]
44. si:ch211-260g14.9 si:ch211-260g14.9 2 0.932 - - - - - - - 0.932 -
45. CDK18 ENSDARG00000012204 5 0.932 - - - - - - - 0.932 - cyclin dependent kinase 18 [Source:HGNC Symbol;Acc:HGNC:8751]
46. si:ch73-337l15.2 ENSDARG00000094268 2 0.932 - - - - - - - 0.932 - si:ch73-337l15.2 [Source:ZFIN;Acc:ZDB-GENE-041008-80]
47. si:dkeyp-98a7.10 si:dkeyp-98a7.10 7 0.932 - - - - - - - 0.932 -
48. TNFRSF14_4 TNFRSF14_4 5 0.932 - - - - - - - 0.932 -
49. si:dkey-225f23.4 ENSDARG00000102520 86 0.926 - - 0.926 - - - - - - si:dkey-225f23.4 [Source:NCBI gene;Acc:100005326]
50. npas2 ENSDARG00000016536, ENSDARG00000116993 35 0.921 - - 0.921 - - - - - - neuronal PAS domain protein 2 [Source:ZFIN;Acc:ZDB-GENE-030408-3]
51. FOXJ3 ENSDARG00000075774 197 0.92 - - 0.920 - - - - - - forkhead box J3 [Source:ZFIN;Acc:ZDB-GENE-101005-1]
52. zgc:153292 ENSDARG00000070458, ENSDARG00000112223 134 0.92 - 0.920 - - - - - - - zgc:153292 [Source:ZFIN;Acc:ZDB-GENE-060929-1098]
53. CABZ01049057.1 CABZ01049057.1 479 0.919 - - 0.919 - - - - - -
54. thraa ENSDARG00000000151 148 0.918 - 0.918 - - - - - - - thyroid hormone receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-990415-263]
55. PLA2G3 ENSDARG00000008948 23 0.917 - - - - - - - 0.917 - phospholipase A2 group III [Source:ZFIN;Acc:ZDB-GENE-051113-96]
56. pfkfb1 ENSDARG00000037140 182 0.915 - - 0.915 - - - - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5664]
57. si:dkey-66n24.2 si:dkey-66n24.2 69 0.915 - - 0.915 - - - - - -
58. CABZ01078499.2 CABZ01078499.2 2 0.914 - - - - - - - 0.914 -
59. ttll11 ENSDARG00000060374, ENSDARG00000113807 225 0.914 - 0.914 - - - - - - - tubulin tyrosine ligase-like family, member 11 [Source:ZFIN;Acc:ZDB-GENE-061013-747]
60. mtmr1a ENSDARG00000056690 4 0.912 - - - - - - - 0.912 - myotubularin related protein 1a [Source:ZFIN;Acc:ZDB-GENE-050522-518]
61. C25H11orf74 C25H11orf74 161 0.909 - - 0.909 - - - - - -
62. nceh1a ENSDARG00000020427 35 0.907 - - 0.907 - - - - - - neutral cholesterol ester hydrolase 1a [Source:ZFIN;Acc:ZDB-GENE-040711-2]
63. fbxo16 ENSDARG00000033949 35 0.906 - - 0.906 - - - - - - F-box protein 16 [Source:ZFIN;Acc:ZDB-GENE-041015-747]
64. pih1d3 ENSDARG00000038612, ENSDARG00000116391, ENSDARG00000116607 57 0.903 - - 0.903 - - - - - - PIH1 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040722-2]
65. flrt1a 107 0.901 - - 0.901 - - - - - - fibronectin leucine rich transmembrane protein 1a, transcript variant X2
66. lss ENSDARG00000061274 68 0.9 - - - - - - 0.900 - - lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase) [Source:ZFIN;Acc:ZDB-GENE-050119-7]
67. crygs1 ENSDARG00000042992 45 0.899 - 0.899 - - - - - - - crystallin, gamma S1 [Source:ZFIN;Acc:ZDB-GENE-050223-4]
68. METTL15 ENSDARG00000089236 39 0.897 - - 0.897 - - - - - - methyltransferase like 15 [Source:ZFIN;Acc:ZDB-GENE-130530-958]
69. CU075695.3 CU075695.3 253 0.895 - - 0.895 - - - - - -
70. ATP5J2 68 0.895 - - 0.895 - - - - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F2
71. CABZ01073069.1 CABZ01073069.1 5 0.894 - - - - - - - 0.894 -
72. dctn1a ENSDARG00000019743 45 0.892 - - 0.892 - - - - - - dynactin 1a [Source:ZFIN;Acc:ZDB-GENE-070117-2205]
73. si:dkey-21o19.6 si:dkey-21o19.6 18 0.89 - - - - - - - 0.890 -
74. fbxo15 ENSDARG00000016897 18 0.889 - - - - - - 0.889 - - F-box protein 15 [Source:ZFIN;Acc:ZDB-GENE-080416-4]
75. gpc2 ENSDARG00000104217 10 0.889 - - - - - - 0.889 - - glypican 2 [Source:ZFIN;Acc:ZDB-GENE-050302-31]
76. CST7 CST7 22 0.889 - - - - - - 0.889 - -
77. hps1 ENSDARG00000026170 131 0.889 - - - - - - 0.889 - - Hermansky-Pudlak syndrome 1 [Source:ZFIN;Acc:ZDB-GENE-051113-152]
78. cnih3 ENSDARG00000014953 25 0.889 - - - - - - 0.889 - - cornichon family AMPA receptor auxiliary protein 3 [Source:ZFIN;Acc:ZDB-GENE-041001-180]
79. snx10b ENSDARG00000040474 29 0.889 - - - - - - 0.889 - - sorting nexin 10b [Source:ZFIN;Acc:ZDB-GENE-070628-1]
80. FP017279.3 FP017279.3 31 0.883 - 0.883 - - - - - - -
81. dnajc28 ENSDARG00000018181, ENSDARG00000114383 134 0.881 - - - - - - 0.881 - - DnaJ (Hsp40) homolog, subfamily C, member 28 [Source:ZFIN;Acc:ZDB-GENE-050417-130]
82. lamb1a_1 ENSDARG00000101209 13 0.879 - - - - - - - 0.879 - laminin, beta 1a [Source:ZFIN;Acc:ZDB-GENE-021226-1]
83. ncf4 ENSDARG00000040812, ENSDARG00000110339 45 0.878 - - 0.878 - - - - - - neutrophil cytosolic factor 4 [Source:ZFIN;Acc:ZDB-GENE-041124-1]
84. rem2 ENSDARG00000074064, ENSDARG00000109687 219 0.873 - - 0.873 - - - - - - RAS (RAD and GEM)-like GTP binding 2 [Source:ZFIN;Acc:ZDB-GENE-081110-1]
85. baiap2a ENSDARG00000062799 231 0.873 - - - - - - 0.873 - - BAI1-associated protein 2a [Source:ZFIN;Acc:ZDB-GENE-060421-2756]
86. vwa2 ENSDARG00000075441 44 0.87 - - - - - - - 0.870 - von Willebrand factor A domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-100302-1]
87. rsph3 ENSDARG00000043470 74 0.868 - - 0.868 - - - - - - radial spoke head 3 homolog [Source:ZFIN;Acc:ZDB-GENE-040724-173]
88. CABZ01057951.1 CABZ01057951.1 10 0.868 - - - - - - - 0.868 -
89. CCDC23 CCDC23 54 0.867 - - 0.867 - - - - - -
90. cyr61l2 ENSDARG00000099985 725 0.866 - - - - 0.866 - - - - cysteine-rich, angiogenic inducer, 61 like 2 [Source:ZFIN;Acc:ZDB-GENE-060404-5]
91. RFFL ENSDARG00000042833 73 0.865 - - 0.865 - - - - - - ring finger and FYVE-like domain containing E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-2274]
92. TMEM235 ENSDARG00000089276 58 0.865 - - 0.865 - - - - - - transmembrane protein 235 [Source:ZFIN;Acc:ZDB-GENE-130603-43]
93. e2f5 ENSDARG00000038812 388 0.864 - - 0.864 - - - - - - E2F transcription factor 5 [Source:ZFIN;Acc:ZDB-GENE-030828-3]
94. zgc:113276 ENSDARG00000056650 218 0.863 - 0.863 - - - - - - - zgc:113276 [Source:ZFIN;Acc:ZDB-GENE-050522-7]
95. zgc:113279 ENSDARG00000099533 156 0.862 - 0.862 - - - - - - - zgc:113279 [Source:ZFIN;Acc:ZDB-GENE-050522-529]
96. si:dkey-9i23.6 ENSDARG00000094678 58 0.861 - - 0.861 - - - - - - si:dkey-9i23.6 [Source:ZFIN;Acc:ZDB-GENE-090313-365]
97. WDPCP ENSDARG00000074590 35 0.861 - - - - - - - 0.861 - WD repeat containing planar cell polarity effector [Source:ZFIN;Acc:ZDB-GENE-100405-4]
98. atad1b ENSDARG00000056609 40 0.859 - - 0.859 - - - - - - ATPase family, AAA domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-030616-44]
99. ptgdsa ENSDARG00000069439, ENSDARG00000109669 289 0.858 - - 0.858 - - - - - - prostaglandin D2 synthase a [Source:ZFIN;Acc:ZDB-GENE-081022-118]
100. CABZ01059627.1 ENSDARG00000078394 101 0.858 - 0.858 - - - - - - -

There are 311 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA