Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-156j22.4

Gene Name Gene ID Reads Annotation
si:ch211-156j22.4 ENSDARG00000094977 4350 si:ch211-156j22.4 [Source:ZFIN;Acc:ZDB-GENE-030131-1968]










Genes with expression patterns similar to si:ch211-156j22.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-156j22.4 ENSDARG00000094977 4350 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-156j22.4 [Source:ZFIN;Acc:ZDB-GENE-030131-1968]
2. skib ENSDARG00000008034 6518 1.769 - - - - - - 0.780 - 0.989 v-ski avian sarcoma viral oncogene homolog b [Source:ZFIN;Acc:ZDB-GENE-990715-10]
3. chd7 ENSDARG00000075211 12085 1.713 - - - - - - 0.715 - 0.998 chromodomain helicase DNA binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-070912-179]
4. celsr2 ENSDARG00000019726, ENSDARG00000094388 4002 1.705 - - - - - - 0.705 - 1.000 cadherin, EGF LAG seven-pass G-type receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070122-2]
5. ywhag2 ENSDARG00000071658, ENSDARG00000116741 3326 1.627 - 0.842 - - - - 0.785 - - 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061023-2]
6. znf865 ENSDARG00000036698 15532 1.626 - 0.768 - - - - 0.858 - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
7. hsf2 ENSDARG00000053097 1188 1.58 - - - - - - 0.775 0.805 - heat shock transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-011128-1]
8. ZNF710 ZNF710 766 1.574 - - - - - - 0.843 0.731 -
9. rgmd ENSDARG00000034013, ENSDARG00000111872 4752 1.572 - 0.701 - - - - 0.871 - - RGM domain family, member D [Source:ZFIN;Acc:ZDB-GENE-030131-561]
10. mrpl38 ENSDARG00000039667 1145 1.547 - 0.832 - - - - 0.715 - - mitochondrial ribosomal protein L38 [Source:ZFIN;Acc:ZDB-GENE-040426-2373]
11. wu:fb17g07 wu:fb17g07 10567 1.538 - 0.724 - - - - 0.814 - -
12. hapln1a ENSDARG00000089769 12334 1.529 - 0.702 - - - - 0.827 - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
13. sh2b1 ENSDARG00000057679, ENSDARG00000113263 2194 1.514 - - - - - 0.705 0.809 - - SH2B adaptor protein 1 [Source:ZFIN;Acc:ZDB-GENE-070209-188]
14. ABTB2 ABTB2 584 1.513 - - - - - 0.721 0.792 - -
15. CACFD1 ENSDARG00000090818 1298 1.509 - - - - - - 0.761 0.748 - calcium channel flower domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1365]
16. ect2 ENSDARG00000007278 1193 1.501 - - - - - - 0.742 0.759 - epithelial cell transforming 2 [Source:ZFIN;Acc:ZDB-GENE-040831-2]
17. fzd3a ENSDARG00000021664 1958 1.5 - 0.763 - - - - 0.737 - - frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
18. polr2i ENSDARG00000040443, ENSDARG00000110652 879 1.499 - - - - - 0.753 0.746 - - polymerase (RNA) II (DNA directed) polypeptide I [Source:ZFIN;Acc:ZDB-GENE-041010-106]
19. tmem47 ENSDARG00000057322 4691 1.498 - 0.700 - - - - 0.798 - - transmembrane protein 47 [Source:ZFIN;Acc:ZDB-GENE-040426-2644]
20. POLE4 ENSDARG00000013016 848 1.486 - - - - - - 0.763 0.723 - polymerase (DNA-directed), epsilon 4, accessory subunit [Source:ZFIN;Acc:ZDB-GENE-050522-309]
21. gas1b ENSDARG00000067984 1748 1.484 - 0.721 - - - - 0.763 - - growth arrest-specific 1b [Source:ZFIN;Acc:ZDB-GENE-050302-79]
22. palm1a ENSDARG00000026882, ENSDARG00000115356 3425 1.48 - 0.710 - - - - 0.770 - - paralemmin 1a [Source:ZFIN;Acc:ZDB-GENE-050417-409]
23. cluap1 ENSDARG00000079110 280 1.466 0.711 - - - - - 0.755 - - clusterin associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1943]
24. syncripl ENSDARG00000026723 3889 1.462 - - - - - 0.711 0.751 - - synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
25. meaf6 ENSDARG00000101216 6865 1.447 - - - - 0.709 - 0.738 - - MYST/Esa1-associated factor 6 [Source:ZFIN;Acc:ZDB-GENE-040808-12]
26. rbm25 rbm25 3629 1.437 - 0.716 - - - - 0.721 - -
27. pdlim3b ENSDARG00000014248, ENSDARG00000111275 708 1.424 - 0.722 - - - - 0.702 - - PDZ and LIM domain 3b [Source:ZFIN;Acc:ZDB-GENE-060130-104]
28. pax6b ENSDARG00000045936 349 1.414 0.709 0.705 - - - - - - - paired box 6b [Source:ZFIN;Acc:ZDB-GENE-001031-1]
29. sox12 ENSDARG00000025847 681 1.412 - - - - - 0.707 0.705 - - SRY (sex determining region Y)-box 12 [Source:ZFIN;Acc:ZDB-GENE-040724-33]
30. si:dkeyp-67e6.4 si:dkeyp-67e6.4 3680 1 - - - - - - - - 1.000
31. surf4 ENSDARG00000104647 4203 1 - - - - - - - - 1.000 surfeit gene 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1426]
32. GJD2_1 GJD2_1 3045 1 - - - - - - - - 1.000
33. bcl7ba ENSDARG00000111877 3696 1 - - - - - - - - 1.000 BCL tumor suppressor 7Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2193]
34. tbc1d23 ENSDARG00000044357, ENSDARG00000109696 6272 1 - - - - - - - - 1.000 TBC1 domain family, member 23 [Source:ZFIN;Acc:ZDB-GENE-040426-1253]
35. TMEM185A TMEM185A 5505 1 - - - - - - - - 1.000
36. KRT78 KRT78 10751 1 - - - - - - - - 1.000
37. selt1a 9746 0.999 - - - - - - - - 0.999 selenoprotein T, 1a
38. mob4 ENSDARG00000056085 17978 0.999 - - - - - - - - 0.999 MOB family member 4, phocein [Source:ZFIN;Acc:ZDB-GENE-040801-174]
39. arid3b ENSDARG00000104034 16303 0.999 - - - - - - - - 0.999 AT rich interactive domain 3B (BRIGHT-like) [Source:ZFIN;Acc:ZDB-GENE-070209-182]
40. dynll1 ENSDARG00000058454 33932 0.988 - - - - - - - - 0.988 dynein, light chain, LC8-type 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1961]
41. zgc:86709 ENSDARG00000110511, ENSDARG00000111417 22785 0.981 - - - - - - - - 0.981 zgc:86709 [Source:ZFIN;Acc:ZDB-GENE-040625-35]
42. ZFHX3 ENSDARG00000103057 7759 0.98 - - - - - - - - 0.980 zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
43. col11a1b ENSDARG00000009014 9998 0.962 - - - - - - - - 0.962 collagen, type XI, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-070912-607]
44. rps5 ENSDARG00000043453 91085 0.961 - - - - - - - - 0.961 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
45. CABZ01044814.2 CABZ01044814.2 25711 0.96 - - - - - - - - 0.960
46. rplp0 ENSDARG00000051783 88740 0.94 - - - - - - - - 0.940 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
47. faua ENSDARG00000099022 82901 0.938 - - - - - - - - 0.938 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
48. jam3b ENSDARG00000061794 5655 0.93 - - - - - - 0.930 - - junctional adhesion molecule 3b [Source:ZFIN;Acc:ZDB-GENE-030131-441]
49. RPL37A RPL37A 62256 0.924 - - - - - - - - 0.924
50. bcam ENSDARG00000090190 39912 0.923 - - - - - - - - 0.923 basal cell adhesion molecule (Lutheran blood group) [Source:ZFIN;Acc:ZDB-GENE-060929-620]
51. SLC4A7 ENSDARG00000073952 474 0.905 - 0.905 - - - - - - - solute carrier family 4, sodium bicarbonate cotransporter, member 7 [Source:ZFIN;Acc:ZDB-GENE-140106-104]
52. zgc:193505 ENSDARG00000093584, ENSDARG00000109499 47304 0.901 - - - - - - - - 0.901 zgc:193505 [Source:ZFIN;Acc:ZDB-GENE-030131-7103]
53. appb ENSDARG00000055543, ENSDARG00000109552 4461 0.894 - - - - - - - 0.894 - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
54. rad21a_1 ENSDARG00000006092 4482 0.886 - - - - - - 0.886 - - RAD21 cohesin complex component a [Source:ZFIN;Acc:ZDB-GENE-030131-994]
55. plagx ENSDARG00000036855 3768 0.885 - - - - - - 0.885 - - pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
56. MYPN 404 0.885 - - - - - - 0.885 - - myopalladin, transcript variant X1
57. cbx2 ENSDARG00000044938 1576 0.882 - - - - - 0.882 - - - chromobox homolog 2 (Drosophila Pc class) [Source:ZFIN;Acc:ZDB-GENE-030131-5502]
58. ubtd2 ENSDARG00000069184, ENSDARG00000109249 1658 0.87 - 0.870 - - - - - - - ubiquitin domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040718-473]
59. prkcsh ENSDARG00000004470 1424 0.866 - - - - - - 0.866 - - protein kinase C substrate 80K-H [Source:ZFIN;Acc:ZDB-GENE-040426-770]
60. ss18l2 ENSDARG00000101085 748 0.864 - - - - - - - 0.864 - synovial sarcoma translocation gene on chromosome 18-like 2 [Source:ZFIN;Acc:ZDB-GENE-050417-268]
61. rplp1 ENSDARG00000021864 127841 0.86 - - - - - - - - 0.860 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
62. pvrl3l pvrl3l 943 0.858 - - - - - - 0.858 - -
63. tomm40l ENSDARG00000036721 1714 0.858 - 0.858 - - - - - - - translocase of outer mitochondrial membrane 40 homolog, like [Source:ZFIN;Acc:ZDB-GENE-040426-2319]
64. ephb3a ENSDARG00000031548 1872 0.857 - - - - - - 0.857 - - eph receptor B3a [Source:ZFIN;Acc:ZDB-GENE-990415-60]
65. ctr9 ENSDARG00000009170 1265 0.857 - - - - - - 0.857 - - CTR9 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-3782]
66. pwp1 ENSDARG00000015921 1160 0.857 - - - - - - 0.857 - - PWP1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1049]
67. tmem130 ENSDARG00000103789 756 0.853 - - - - - - 0.853 - - transmembrane protein 130 [Source:ZFIN;Acc:ZDB-GENE-080204-23]
68. UBA6 UBA6 229 0.849 - - - - - 0.849 - - -
69. usp4 ENSDARG00000014770 1684 0.848 - - - - - - 0.848 - - ubiquitin specific peptidase 4 (proto-oncogene) [Source:ZFIN;Acc:ZDB-GENE-041008-187]
70. si:dkey-251i10.2 ENSDARG00000093957 4424 0.847 - - - - - - 0.847 - - si:dkey-251i10.2 [Source:ZFIN;Acc:ZDB-GENE-050506-102]
71. trim3b ENSDARG00000005397 680 0.847 - 0.847 - - - - - - - tripartite motif containing 3b [Source:ZFIN;Acc:ZDB-GENE-070112-1132]
72. aqp4 ENSDARG00000010565 624 0.846 - - - - - - 0.846 - - aquaporin 4 [Source:ZFIN;Acc:ZDB-GENE-040724-152]
73. sesn2 ENSDARG00000070012 294 0.845 - - - - - 0.845 - - - sestrin 2 [Source:ZFIN;Acc:ZDB-GENE-070108-1]
74. wdr82 ENSDARG00000014083 3159 0.845 - 0.845 - - - - - - - WD repeat domain 82 [Source:ZFIN;Acc:ZDB-GENE-030131-333]
75. abcf1 ENSDARG00000031795 8635 0.845 - - - - - - 0.845 - - ATP-binding cassette, sub-family F (GCN20), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-31]
76. anapc5 ENSDARG00000008461 434 0.843 - 0.843 - - - - - - - anaphase promoting complex subunit 5 [Source:ZFIN;Acc:ZDB-GENE-030131-1574]
77. xpr1 xpr1 840 0.842 - - - - - - 0.842 - -
78. snrpd3l ENSDARG00000076283 7655 0.842 - - - - - - 0.842 - - small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
79. lsm14ab ENSDARG00000100553 3837 0.841 - - - - - - 0.841 - - LSM14A mRNA processing body assembly factor b [Source:ZFIN;Acc:ZDB-GENE-040426-2462]
80. tle2 5014 0.839 - - - - - - 0.839 - - transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila), transcript variant X4
81. tbc1d32 ENSDARG00000041734 486 0.837 - - - - - 0.837 - - - TBC1 domain family, member 32 [Source:ZFIN;Acc:ZDB-GENE-061106-5]
82. zgc:174563_1 zgc:174563_1 146 0.835 - - - - - - 0.835 - -
83. si:dkey-43f9.4 si:dkey-43f9.4 180 0.835 - - - - - 0.835 - - -
84. fzd4 ENSDARG00000104117 842 0.834 - - - - - - 0.834 - - frizzled class receptor 4 [Source:ZFIN;Acc:ZDB-GENE-990415-217]
85. tspan18a ENSDARG00000056656 530 0.833 - - - - - - 0.833 - - tetraspanin 18a [Source:ZFIN;Acc:ZDB-GENE-040718-232]
86. COX18 ENSDARG00000102463 602 0.833 - - - - - - 0.833 - - cytochrome c oxidase assembly factor COX18 [Source:ZFIN;Acc:ZDB-GENE-080204-88]
87. ctbp2 ctbp2 3255 0.832 - - - - - - 0.832 - -
88. CR450814.3 CR450814.3 608 0.832 - - - - - - 0.832 - -
89. gbp ENSDARG00000040059 1939 0.832 - - - - - - 0.832 - - glycogen synthase kinase binding protein [Source:ZFIN;Acc:ZDB-GENE-990714-7]
90. mpp2b ENSDARG00000010957 415 0.831 - - - - - - 0.831 - - membrane protein, palmitoylated 2b (MAGUK p55 subfamily member 2) [Source:ZFIN;Acc:ZDB-GENE-040704-70]
91. arvcfb ENSDARG00000061688 2388 0.831 - - - - - - 0.831 - - ARVCF, delta catenin family member b [Source:ZFIN;Acc:ZDB-GENE-060526-60]
92. ECE2 ECE2 293 0.831 - - - - - 0.831 - - -
93. ykt6 ENSDARG00000038308 473 0.831 - - - - - - 0.831 - - YKT6 v-SNARE homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-733]
94. mrps10 ENSDARG00000045913 1453 0.831 - 0.831 - - - - - - - mitochondrial ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040914-39]
95. roraa ENSDARG00000031768 278 0.83 - - - - - 0.830 - - - RAR-related orphan receptor A, paralog a [Source:ZFIN;Acc:ZDB-GENE-060306-2]
96. sh3gl2 sh3gl2 1305 0.828 - 0.828 - - - - - - -
97. taf10 ENSDARG00000068641 3333 0.828 - - - - - - 0.828 - - TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-060526-334]
98. si:ch211-67e16.4 ENSDARG00000086317 609 0.826 - - - - - - 0.826 - - si:ch211-67e16.4 [Source:ZFIN;Acc:ZDB-GENE-070912-311]
99. mrpl17 ENSDARG00000075677 1840 0.826 - - - - - - 0.826 - - mitochondrial ribosomal protein L17 [Source:ZFIN;Acc:ZDB-GENE-040912-133]
100. grem2 grem2 743 0.823 - 0.823 - - - - - - -

There are 944 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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