Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-156j16.1

Gene Name Gene ID Reads Annotation
si:ch211-156j16.1 ENSDARG00000092035 7441 si:ch211-156j16.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4106]










Genes with expression patterns similar to si:ch211-156j16.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-156j16.1 ENSDARG00000092035 7441 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-156j16.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4106]
2. srl ENSDARG00000104587 11126 5.113 0.867 - 0.726 0.870 0.713 0.984 0.953 - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
3. mybpc2b ENSDARG00000021265 9618 4.971 0.920 - - 0.732 - 0.918 0.887 0.757 0.757 myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
4. tnnt3a ENSDARG00000030270 112506 4.733 0.931 - 0.721 - 0.722 - 0.809 0.712 0.838 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
5. smyhc1 ENSDARG00000099959, ENSDARG00000115916 48476 4.436 0.850 - 0.713 0.730 0.703 - - 0.710 0.730 slow myosin heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-271]
6. TMPO TMPO 3264 4.313 0.945 - 0.706 - - 0.971 0.943 0.748 -
7. eno1a ENSDARG00000022456, ENSDARG00000116458 14401 4.303 0.886 0.966 0.757 0.753 - - 0.941 - - enolase 1a, (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-6048]
8. unc45b ENSDARG00000008433 8298 4.276 0.850 0.879 - - 0.757 - 0.982 - 0.808 unc-45 myosin chaperone B [Source:ZFIN;Acc:ZDB-GENE-020919-3]
9. sgcd ENSDARG00000098573 4980 4.265 0.846 - 0.721 - - 0.971 0.964 - 0.763 sarcoglycan, delta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-3684]
10. SPEG SPEG 4017 4.227 0.815 - 0.782 0.744 - 0.960 0.926 - -
11. pvalb4 ENSDARG00000024433 35736 4.166 0.882 - 0.717 0.784 - 0.878 0.905 - - parvalbumin 4 [Source:ZFIN;Acc:ZDB-GENE-040625-48]
12. adss ENSDARG00000002071 5497 4.153 0.819 0.959 0.708 - 0.713 - 0.954 - - adenylosuccinate synthase [Source:ZFIN;Acc:ZDB-GENE-050417-337]
13. tpma ENSDARG00000033683 752432 4.121 0.916 - 0.792 0.808 - - 0.832 0.773 - alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
14. NRAP ENSDARG00000009341 3565 4.085 0.900 - 0.749 - 0.706 - 0.946 0.784 - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
15. zgc:92518 ENSDARG00000016343 3837 4.08 0.893 - 0.737 - 0.764 - 0.975 - 0.711 zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
16. cap2 ENSDARG00000104478 3266 4.077 0.903 - - 0.745 - - 0.944 0.716 0.769 CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
17. rtn2a ENSDARG00000016088 12184 4.077 0.881 - - 0.727 0.706 - 0.975 0.788 - reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
18. tmem38a ENSDARG00000024047 41883 4.07 0.923 - 0.833 0.802 0.751 - - 0.761 - transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
19. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 4.058 0.864 - - - 0.724 - 0.935 0.702 0.833 fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
20. txlnba ENSDARG00000020594 9385 4.041 - - 0.803 - - 0.748 0.953 0.714 0.823 taxilin beta a [Source:ZFIN;Acc:ZDB-GENE-030131-322]
21. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 4.008 0.828 - 0.770 0.724 - - 0.944 - 0.742 ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
22. jph2 ENSDARG00000028625 6706 3.976 0.797 - - 0.729 - - 0.948 0.723 0.779 junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
23. neb ENSDARG00000032630, ENSDARG00000109273 19493 3.84 0.887 - 0.717 0.772 0.706 - - - 0.758 nebulin [Source:ZFIN;Acc:ZDB-GENE-041111-216]
24. si:ch211-226o13.2 84923 3.838 0.745 - 0.805 0.750 - - - 0.738 0.800 si:ch211-226o13.2
25. ttna ttna 101197 3.837 0.840 - 0.739 - 0.763 - - 0.724 0.771
26. SYNPO2 SYNPO2 7382 3.751 - - 0.740 0.724 - - 0.710 0.725 0.852
27. prx ENSDARG00000017246 6183 3.566 0.844 - - - - 0.978 0.956 - 0.788 periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
28. nexn ENSDARG00000057317 10972 3.544 0.936 - 0.799 - - - 0.942 - 0.867 nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
29. slc25a4 ENSDARG00000027355, ENSDARG00000112318 17542 3.507 0.891 0.914 0.732 - - - 0.970 - - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5275]
30. si:ch211-114n24.7 si:ch211-114n24.7 2544 3.501 0.838 - 0.757 - - 0.950 0.956 - -
31. klhl41b ENSDARG00000006757 10762 3.461 0.924 - 0.735 - - - 0.964 - 0.838 kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
32. eef2l2 ENSDARG00000035256 6815 3.433 0.881 - - 0.791 - 0.988 0.773 - - eukaryotic translation elongation factor 2, like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8112]
33. SYNPO2L SYNPO2L 6697 3.425 0.913 0.954 0.701 - - - - - 0.857
34. actn3a ENSDARG00000013755, ENSDARG00000111128 22706 3.403 0.905 - 0.768 0.819 - 0.911 - - - actinin alpha 3a [Source:ZFIN;Acc:ZDB-GENE-000329-9]
35. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 3.378 0.794 - 0.828 - - - 0.976 - 0.780 RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
36. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 3.351 0.881 - 0.753 - 0.799 - 0.918 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
37. txlnbb ENSDARG00000076241 6396 3.348 0.903 - - - 0.717 - 0.961 - 0.767 taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
38. pgam2 ENSDARG00000057571 23387 3.348 0.947 - - 0.792 0.709 0.900 - - - phosphoglycerate mutase 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040116-6]
39. znf106a ENSDARG00000016651 6049 3.343 0.816 - - 0.775 - - 0.966 - 0.786 zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
40. tgm2a ENSDARG00000070157 4516 3.342 0.927 - 0.714 - - - 0.942 - 0.759 transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
41. PTPLA PTPLA 4044 3.34 0.914 - - - - - 0.952 0.752 0.722
42. smpx ENSDARG00000045302 2175 3.339 0.796 0.897 - - - - 0.900 - 0.746 small muscle protein X-linked [Source:ZFIN;Acc:ZDB-GENE-040704-24]
43. nap1l4a ENSDARG00000070560, ENSDARG00000113907 4244 3.33 0.719 - - - 0.768 0.963 0.880 - - nucleosome assembly protein 1-like 4a [Source:ZFIN;Acc:ZDB-GENE-030131-9099]
44. mdh1b ENSDARG00000018008 3196 3.309 0.798 - 0.745 - - - 0.970 - 0.796 malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
45. myom1a ENSDARG00000061249 10230 3.301 - - 0.842 - - - 0.955 0.783 0.721 myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
46. xirp2a ENSDARG00000071113 7113 3.296 0.902 - - - - - 0.956 0.704 0.734 xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
47. BX324201.1 BX324201.1 3302 3.279 0.914 - - - - - 0.951 0.709 0.705
48. zgc:158296 ENSDARG00000070923 3935 3.275 - - 0.761 0.773 - - 0.968 - 0.773 zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
49. casq1b ENSDARG00000018105 2643 3.271 0.825 - - 0.733 - - 0.975 - 0.738 calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
50. tmem161a ENSDARG00000012790 16094 3.269 0.930 - 0.790 - - - 0.746 - 0.803 transmembrane protein 161A [Source:ZFIN;Acc:ZDB-GENE-041111-267]
51. chrna1 ENSDARG00000009021 2931 3.268 0.884 - 0.711 - - - 0.927 - 0.746 cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
52. hhatla ENSDARG00000039051 6598 3.256 0.863 - - 0.703 - - 0.956 - 0.734 hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
53. ITGB1BP2 ENSDARG00000030176 2472 3.253 0.857 - - - 0.706 - 0.916 - 0.774 integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
54. sar1ab ENSDARG00000033320 3984 3.25 0.852 - 0.706 0.729 - - 0.963 - - secretion associated, Ras related GTPase 1Ab [Source:ZFIN;Acc:ZDB-GENE-050417-437]
55. pbxip1a ENSDARG00000071015 4960 3.231 0.858 - - 0.738 - - 0.907 - 0.728 pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
56. tnnt2d ENSDARG00000002988 7590 3.219 0.812 - - 0.720 - - 0.883 - 0.804 troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
57. cox17 ENSDARG00000069920, ENSDARG00000114117 5591 3.214 - - 0.724 0.790 - - 0.883 - 0.817 cytochrome c oxidase copper chaperone COX17 [Source:ZFIN;Acc:ZDB-GENE-040912-91]
58. tnnc1b ENSDARG00000037539 13945 3.214 - - 0.804 - 0.741 - 0.910 - 0.759 troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
59. chrnd ENSDARG00000019342 2728 3.213 0.773 - 0.764 - - - 0.923 - 0.753 cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
60. trim55a ENSDARG00000029596 2858 3.208 0.857 - 0.702 - - - 0.917 - 0.732 tripartite motif containing 55a [Source:ZFIN;Acc:ZDB-GENE-040718-50]
61. cacna2d1a ENSDARG00000014804 1924 3.205 0.815 - - - - - 0.957 0.731 0.702 calcium channel, voltage-dependent, alpha 2/delta subunit 1a [Source:ZFIN;Acc:ZDB-GENE-041210-215]
62. actn3b ENSDARG00000001431 15747 3.193 0.913 - 0.741 0.837 - 0.702 - - - actinin alpha 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2040]
63. cav3 ENSDARG00000024141 14906 3.193 0.715 - - 0.734 0.839 - 0.905 - - caveolin 3 [Source:ZFIN;Acc:ZDB-GENE-050522-426]
64. apobec2a ENSDARG00000018881 4790 3.187 0.907 - - 0.754 - - - 0.790 0.736 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2a [Source:ZFIN;Acc:ZDB-GENE-050306-15]
65. CR847973.1 ENSDARG00000115516 8754 3.185 0.826 - - 0.757 - - 0.856 - 0.746
66. ryr1b ENSDARG00000023797 5693 3.184 - - 0.719 - - - 0.943 0.725 0.797 ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
67. casq2 ENSDARG00000008982 21802 3.153 0.954 - 0.716 0.775 - - - 0.708 - calsequestrin 2 [Source:ZFIN;Acc:ZDB-GENE-010724-12]
68. bves ENSDARG00000058548 2291 3.105 0.881 - 0.732 - - - - 0.738 0.754 blood vessel epicardial substance [Source:ZFIN;Acc:ZDB-GENE-040624-11]
69. atp2a1 ENSDARG00000020574 291561 3.103 0.898 - 0.740 0.731 - - 0.734 - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
70. mylz3 ENSDARG00000017441 303597 3.093 0.867 - 0.741 - - - 0.752 - 0.733 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
71. tnni1al 8272 3.086 0.808 - 0.793 - - - - 0.715 0.770 troponin I, skeletal, slow like, transcript variant X1
72. ckmb ENSDARG00000040565 505935 3.065 0.848 - 0.741 0.729 - - - 0.747 - creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
73. tmod4 ENSDARG00000020890 17436 3.063 - - 0.725 0.782 0.754 - - - 0.802 tropomodulin 4 (muscle) [Source:ZFIN;Acc:ZDB-GENE-991019-9]
74. ttnb ttnb 73721 2.988 0.737 - 0.726 0.757 0.768 - - - -
75. ak1 ENSDARG00000001950 26964 2.987 0.753 - - 0.788 0.730 - 0.716 - - adenylate kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040822-37]
76. ckma ENSDARG00000035327, ENSDARG00000114671 418792 2.97 0.842 - 0.704 0.719 - - - 0.705 - creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
77. hapln1a ENSDARG00000089769 12334 2.783 0.894 - - - - 0.969 0.920 - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
78. MYOM1 MYOM1 3870 2.743 0.829 - - - - 0.977 0.937 - -
79. prdx3 ENSDARG00000032102, ENSDARG00000114240 10034 2.734 - 0.926 - - - 0.967 0.841 - - peroxiredoxin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-18]
80. myod1 ENSDARG00000030110 6019 2.724 0.931 - - - - - 0.978 - 0.815 myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
81. efemp2a ENSDARG00000094324 39261 2.687 0.868 - - - - 0.932 0.887 - - EGF containing fibulin extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-041212-8]
82. ndufs1 ENSDARG00000028546 5795 2.686 0.888 0.938 - - - - 0.860 - - NADH:ubiquinone oxidoreductase core subunit S1 [Source:ZFIN;Acc:ZDB-GENE-030131-478]
83. fxr1 ENSDARG00000022968 2831 2.657 0.816 0.926 - - - - 0.915 - - fragile X mental retardation, autosomal homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5431]
84. murcb murcb 13655 2.652 0.941 - - 0.756 - - 0.955 - -
85. rbm24b ENSDARG00000031809, ENSDARG00000110167 2404 2.633 0.858 0.931 - - - - 0.844 - - RNA binding motif protein 24b [Source:ZFIN;Acc:ZDB-GENE-060312-43]
86. fermt2 ENSDARG00000020242 9351 2.615 0.787 0.899 - - - - 0.929 - - fermitin family member 2 [Source:ZFIN;Acc:ZDB-GENE-050506-132]
87. sptb ENSDARG00000030490 7128 2.614 0.929 - - - - - 0.954 - 0.731 spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
88. CR354540.2 ENSDARG00000117517 18452 2.608 0.917 - - - - - 0.941 - 0.750
89. trdn ENSDARG00000041779 4283 2.601 0.909 - - - - - 0.924 - 0.768 triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
90. pdha1a ENSDARG00000012387, ENSDARG00000116841 8358 2.601 - 0.904 - - - 0.900 - - 0.797 pyruvate dehydrogenase E1 alpha 1 subunit a [Source:ZFIN;Acc:ZDB-GENE-040426-2719]
91. mdh2 ENSDARG00000043371 14485 2.591 - - 0.777 - - - 0.937 - 0.877 malate dehydrogenase 2, NAD (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-040426-2143]
92. BX294434.1 ENSDARG00000061272 6493 2.577 0.909 - - - - - 0.960 - 0.708 solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
93. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 2.549 0.845 - - - - - 0.895 - 0.809 LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
94. si:ch211-151o1.2 si:ch211-151o1.2 3580 2.547 0.826 0.926 - - - - 0.795 - -
95. desma ENSDARG00000058656 30292 2.538 0.902 - 0.861 0.775 - - - - - desmin a [Source:ZFIN;Acc:ZDB-GENE-980526-221]
96. tnnt2c ENSDARG00000032242 28801 2.52 0.855 - - - 0.753 - 0.912 - - troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
97. ntmt1 ENSDARG00000022399 5779 2.502 0.846 - - - 0.724 - 0.932 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
98. zgc:92113 1738 2.485 0.826 - - - - - 0.943 - 0.716 zgc:92113
99. aldoab ENSDARG00000034470 88942 2.479 0.928 - - 0.802 - - 0.749 - - aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
100. pabpc4 ENSDARG00000059259, ENSDARG00000111312 2392 2.478 0.879 - 0.777 - - - 0.822 - - poly(A) binding protein, cytoplasmic 4 (inducible form) [Source:ZFIN;Acc:ZDB-GENE-030131-9663]

There are 1387 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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