Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-154o6.3_1

Gene Name Gene ID Reads Annotation
si:ch211-154o6.3_1 ENSDARG00000099846, ENSDARG00000112144 10 si:ch211-154o6.3 [Source:ZFIN;Acc:ZDB-GENE-030131-1030]










Genes with expression patterns similar to si:ch211-154o6.3_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-154o6.3_1 ENSDARG00000099846, ENSDARG00000112144 10 5 - 1.000 1.000 - 1.000 1.000 - - 1.000 si:ch211-154o6.3 [Source:ZFIN;Acc:ZDB-GENE-030131-1030]
2. abcb9 ENSDARG00000056200, ENSDARG00000109326 63 2.667 - 1.000 - - 0.890 0.777 - - - ATP-binding cassette, sub-family B (MDR/TAP), member 9 [Source:ZFIN;Acc:ZDB-GENE-050517-12]
3. dnm2a ENSDARG00000069937 32 2.483 - 0.780 - - 0.971 0.732 - - - dynamin 2a [Source:ZFIN;Acc:ZDB-GENE-050913-84]
4. dmrt1 ENSDARG00000007349 16 2 - 1.000 - - - 1.000 - - - doublesex and mab-3 related transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050511-1]
5. si:dkeyp-33e11.1 6 2 - 1.000 - - - 1.000 - - - si:dkeyp-33e11.1, transcript variant X3
6. dnase1l3l dnase1l3l 16 2 - - - - 1.000 1.000 - - -
7. fkbp6 ENSDARG00000030133, ENSDARG00000099077 6 2 - 1.000 - - - 1.000 - - - FK506 binding protein 6 [Source:NCBI gene;Acc:402839]
8. gdf9 ENSDARG00000003229 4 2 - - - - - 1.000 - - 1.000 growth differentiation factor 9 [Source:ZFIN;Acc:ZDB-GENE-050221-7]
9. mcm5_1 ENSDARG00000019507 10 2 - 1.000 - - - 1.000 - - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
10. VMO1 VMO1 11 2 - - - - 1.000 1.000 - - -
11. EXD1 ENSDARG00000098669 27 1.941 - 0.941 - - - 1.000 - - - exonuclease 3'-5' domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060825-267]
12. CABZ01057951.1 CABZ01057951.1 10 1.897 - 1.000 - - - - - - 0.897
13. BX537350.1 BX537350.1 8 1.897 - - - - - 1.000 - - 0.897
14. radil ENSDARG00000079779 14 1.891 - - 0.994 - - - - - 0.897 Ras association and DIL domains [Source:ZFIN;Acc:ZDB-GENE-071206-1]
15. NFATC4 ENSDARG00000054162 44 1.873 - 1.000 - - - 0.873 - - - nuclear factor of activated T cells 4 [Source:ZFIN;Acc:ZDB-GENE-070912-659]
16. b3galtla b3galtla 111 1.859 - 1.000 0.859 - - - - - -
17. NBL1 428 1.786 - 0.813 0.973 - - - - - - neuroblastoma 1, DAN family BMP antagonist
18. ZC3H8 ZC3H8 114 1.771 - - - - 0.771 1.000 - - -
19. znf512 ENSDARG00000041910 20 1.77 - 0.770 - - - 1.000 - - - zinc finger protein 512 [Source:ZFIN;Acc:ZDB-GENE-041014-346]
20. cers4a ENSDARG00000031387 19 1.747 - - - - - 1.000 - - 0.747 ceramide synthase 4a [Source:ZFIN;Acc:ZDB-GENE-020808-1]
21. nudt18 ENSDARG00000041576 61 1.747 - - - - 0.747 1.000 - - - nudix (nucleoside diphosphate linked moiety X)-type motif 18 [Source:ZFIN;Acc:ZDB-GENE-050417-388]
22. si:ch211-198c19.2 si:ch211-198c19.2 165 1.746 - 1.000 0.746 - - - - - -
23. cdk5r1a ENSDARG00000037916 46 1.746 - 1.000 - - - 0.746 - - - cyclin-dependent kinase 5, regulatory subunit 1a (p35) [Source:ZFIN;Acc:ZDB-GENE-080723-17]
24. HIPK1 HIPK1 8 1.739 - - - - - 1.000 - - 0.739
25. zgc:110130 ENSDARG00000039203 352 1.737 - 0.933 0.804 - - - - - - zgc:110130 [Source:ZFIN;Acc:ZDB-GENE-050522-208]
26. spi1a ENSDARG00000067797 113 1.724 - 0.880 - - - 0.844 - - - Spi-1 proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-060825-351]
27. fscn1b ENSDARG00000037747, ENSDARG00000111370 75 1.718 - 0.852 0.866 - - - - - - fascin actin-bundling protein 1b [Source:ZFIN;Acc:ZDB-GENE-120507-1]
28. golga2 ENSDARG00000063197 30 1.667 - 0.794 - - - 0.873 - - - golgin A2 [Source:ZFIN;Acc:ZDB-GENE-081030-1]
29. si:dkey-4c23.3 ENSDARG00000092028, ENSDARG00000110418 4 1.641 - - - - - 0.744 - - 0.897 si:dkey-4c23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-668]
30. ATP5J2 68 1.636 - - 0.919 - - 0.717 - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F2
31. trmt1 ENSDARG00000010978 72 1.561 - - 0.717 - 0.844 - - - - tRNA methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060810-40]
32. PEG3_27 PEG3_27 10 1.523 - - - - - 0.717 - - 0.806
33. tmem107l ENSDARG00000088398, ENSDARG00000109909 208 1.489 - - 0.710 - - 0.779 - - - transmembrane protein 107 like [Source:ZFIN;Acc:ZDB-GENE-090313-269]
34. FP102786.1 ENSDARG00000090551 3 1 - - - - - 1.000 - - - GTPase IMAP family member 8-like [Source:NCBI gene;Acc:101882698]
35. f13b ENSDARG00000101353 2 1 - - - - - 1.000 - - - coagulation factor XIII, B polypeptide [Source:ZFIN;Acc:ZDB-GENE-050208-701]
36. srd5a2a ENSDARG00000043587 21 1 - - - - 1.000 - - - - steroid-5-alpha-reductase, alpha polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-050417-199]
37. pou1f1 ENSDARG00000058924, ENSDARG00000110816, ENSDARG00000115109 17 1 - 1.000 - - - - - - - POU class 1 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040630-7]
38. si:ch211-243a22.1 si:ch211-243a22.1 42 1 - 1.000 - - - - - - -
39. bmp1b ENSDARG00000028053 25 1 - 1.000 - - - - - - - bone morphogenetic protein 1b [Source:ZFIN;Acc:ZDB-GENE-060818-2]
40. fam219b ENSDARG00000104637 3 1 - 1.000 - - - - - - - family with sequence similarity 219, member B [Source:ZFIN;Acc:ZDB-GENE-050327-82]
41. si:ch211-197e7.1 ENSDARG00000095200 1 1 - 1.000 - - - - - - - si:ch211-197e7.1 [Source:ZFIN;Acc:ZDB-GENE-081103-26]
42. amy2a ENSDARG00000013856 13 1 - 1.000 - - - - - - - amylase, alpha 2A (pancreatic) [Source:ZFIN;Acc:ZDB-GENE-040426-2393]
43. timd4 ENSDARG00000077257 4 1 - - - - - 1.000 - - - T cell immunoglobulin and mucin domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-080303-10]
44. si:dkeyp-104f11.7 si:dkeyp-104f11.7 4 1 - 1.000 - - - - - - -
45. olfm1a ENSDARG00000018270 107 1 - 1.000 - - - - - - - olfactomedin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-194]
46. si:dkey-273e13.2 si:dkey-273e13.2 0 1 - 1.000 - - - - - - -
47. wdr17 ENSDARG00000075098 83 1 - 1.000 - - - - - - - WD repeat domain 17 [Source:ZFIN;Acc:ZDB-GENE-090313-131]
48. foxb1b ENSDARG00000053650, ENSDARG00000110408, ENSDARG00000113373 51 1 - 1.000 - - - - - - - forkhead box B1b [Source:ZFIN;Acc:ZDB-GENE-990415-77]
49. ZNFX1 ENSDARG00000100280 118 1 - - - - - 1.000 - - - zinc finger, NFX1-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-110804-2]
50. si:dkey-85k15.4 ENSDARG00000095047 25 1 - 1.000 - - - - - - - si:dkey-85k15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-242]
51. CABZ01085979.1 CABZ01085979.1 4 1 - 1.000 - - - - - - -
52. SRR_1 SRR_1 0 1 - 1.000 - - - - - - -
53. fgf23 ENSDARG00000045854 2 1 - - - - - 1.000 - - - fibroblast growth factor 23 [Source:ZFIN;Acc:ZDB-GENE-050201-4]
54. TMEM57 TMEM57 260 1 - 1.000 - - - - - - -
55. si:dkey-71b5.2 si:dkey-71b5.2 10 1 - - - - - 1.000 - - -
56. U6_28 U6_28 1 1 - - - - - 1.000 - - -
57. CU633857.1 ENSDARG00000115315 21 1 - - - - - 1.000 - - - multiciliate differentiation and DNA synthesis associated cell cycle protein [Source:NCBI gene;Acc:100537904]
58. CABZ01021538.1 CABZ01021538.1 67 1 - 1.000 - - - - - - -
59. PTGR2 ENSDARG00000070673 43 1 - 1.000 - - - - - - - prostaglandin reductase 2 [Source:ZFIN;Acc:ZDB-GENE-050506-71]
60. F2RL3 ENSDARG00000079399 29 1 - - - - - 1.000 - - - F2R like thrombin or trypsin receptor 3 [Source:HGNC Symbol;Acc:HGNC:3540]
61. urgcp ENSDARG00000036767 6 1 - 1.000 - - - - - - - upregulator of cell proliferation [Source:ZFIN;Acc:ZDB-GENE-120215-160]
62. galr1 galr1 9 1 - 1.000 - - - - - - -
63. slc13a1 ENSDARG00000045638, ENSDARG00000114835 13 1 - 1.000 - - - - - - - solute carrier family 13 member 1 [Source:ZFIN;Acc:ZDB-GENE-031222-3]
64. ccr6a ENSDARG00000087474 10 1 - 1.000 - - - - - - - chemokine (C-C motif) receptor 6a [Source:ZFIN;Acc:ZDB-GENE-040625-126]
65. n6amt2 7 1 - 1.000 - - - - - - - N-6 adenine-specific DNA methyltransferase 2 (putative), transcript variant X1
66. GABRA3 ENSDARG00000090883 5 1 - 1.000 - - - - - - - gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
67. FBXO40_1 FBXO40_1 59 1 - 1.000 - - - - - - -
68. sagb ENSDARG00000038378 28 1 - - - - - 1.000 - - - S-antigen; retina and pineal gland (arrestin) b [Source:ZFIN;Acc:ZDB-GENE-050913-98]
69. ZNF337_11 ZNF337_11 11 1 - 1.000 - - - - - - -
70. arhgap30 arhgap30 6 1 - - - - - 1.000 - - -
71. ABHD12B_1 ABHD12B_1 57 1 - 1.000 - - - - - - -
72. si:dkey-115f9.3 7 1 - - - - - 1.000 - - - si:dkey-115f9.3, transcript variant X2
73. ZNRF4 ZNRF4 16 1 - - - - - 1.000 - - -
74. mbpa ENSDARG00000036186 4 1 - - - - - 1.000 - - - myelin basic protein a [Source:ZFIN;Acc:ZDB-GENE-030128-2]
75. pcbp3 ENSDARG00000054378 74 1 - 1.000 - - - - - - - poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]
76. C8H1orf228 C8H1orf228 72 1 - - - - - 1.000 - - -
77. pja2 ENSDARG00000100296 1 1 - 1.000 - - - - - - - praja ring finger ubiquitin ligase 2 [Source:ZFIN;Acc:ZDB-GENE-060526-337]
78. igsf5 igsf5 85 1 - 1.000 - - - - - - -
79. fam5b fam5b 45 1 - 1.000 - - - - - - -
80. si:dkey-199m13.8 si:dkey-199m13.8 61 1 - 1.000 - - - - - - -
81. kcnc3b ENSDARG00000098816 0 1 - 1.000 - - - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 3b [Source:ZFIN;Acc:ZDB-GENE-100901-2]
82. zgc:173593 ENSDARG00000077360 10 1 - 1.000 - - - - - - - zgc:173593 [Source:ZFIN;Acc:ZDB-GENE-071004-57]
83. ABCC6 ABCC6 5 1 - 1.000 - - - - - - -
84. hsp70l_1 ENSDARG00000055723 72 1 - 1.000 - - - - - - - heat shock cognate 70-kd protein, like [Source:ZFIN;Acc:ZDB-GENE-050321-1]
85. si:ch1073-143l10.2 ENSDARG00000094899 32 1 - 1.000 - - - - - - - si:ch1073-143l10.2 [Source:ZFIN;Acc:ZDB-GENE-030131-863]
86. Metazoa_SRP_15 Metazoa_SRP_15 2 1 - - - - - 1.000 - - -
87. txlng ENSDARG00000001969 7 1 - - - - - 1.000 - - - taxilin gamma [Source:ZFIN;Acc:ZDB-GENE-060616-122]
88. alp3 ENSDARG00000098063 0 1 - 1.000 - - - - - - - alkaline phosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-120919-1]
89. CT027569.1 CT027569.1 5 1 - - - - - 1.000 - - -
90. fez1 ENSDARG00000023174 701 1 - 1.000 - - - - - - - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
91. erap2 ENSDARG00000098618 16 1 - 1.000 - - - - - - - endoplasmic reticulum aminopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-080402-6]
92. MYL2 MYL2 7 1 - 1.000 - - - - - - -
93. SMARCA4 ENSDARG00000104339 48 1 - 1.000 - - - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]
94. si:dkey-58f10.14 ENSDARG00000095026 7 1 - - - - - 1.000 - - - si:dkey-58f10.14 [Source:ZFIN;Acc:ZDB-GENE-060526-316]
95. cyp46a4 cyp46a4 5 1 - - - - - 1.000 - - -
96. CR318593.1_1 CR318593.1_1 8 1 - - - - - 1.000 - - -
97. thbs2a ENSDARG00000060410 0 1 - 1.000 - - - - - - - thrombospondin 2a [Source:ZFIN;Acc:ZDB-GENE-020708-2]
98. sox8 sox8 109 1 - - - - - 1.000 - - -
99. stag1a ENSDARG00000061205 13 1 - - - - - 1.000 - - - stromal antigen 1a [Source:ZFIN;Acc:ZDB-GENE-070912-448]
100. ralgapa1 ENSDARG00000076889 36 1 - - - - - 1.000 - - - Ral GTPase activating protein, alpha subunit 1 (catalytic) [Source:ZFIN;Acc:ZDB-GENE-080806-1]

There are 892 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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