Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-154o6.3_1

Gene Name Gene ID Reads Annotation
si:ch211-154o6.3_1 ENSDARG00000099846, ENSDARG00000112144 10 si:ch211-154o6.3 [Source:ZFIN;Acc:ZDB-GENE-030131-1030]










Genes with expression patterns similar to si:ch211-154o6.3_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-154o6.3_1 ENSDARG00000099846, ENSDARG00000112144 10 5 - 1.000 1.000 - 1.000 1.000 - - 1.000 si:ch211-154o6.3 [Source:ZFIN;Acc:ZDB-GENE-030131-1030]
2. abcb9 ENSDARG00000056200, ENSDARG00000109326 63 2.667 - 1.000 - - 0.890 0.777 - - - ATP-binding cassette, sub-family B (MDR/TAP), member 9 [Source:ZFIN;Acc:ZDB-GENE-050517-12]
3. dnm2a ENSDARG00000069937 32 2.483 - 0.780 - - 0.971 0.732 - - - dynamin 2a [Source:ZFIN;Acc:ZDB-GENE-050913-84]
4. fkbp6 ENSDARG00000030133, ENSDARG00000099077 6 2 - 1.000 - - - 1.000 - - - FK506 binding protein 6 [Source:NCBI gene;Acc:402839]
5. mcm5_1 ENSDARG00000019507 10 2 - 1.000 - - - 1.000 - - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
6. dmrt1 ENSDARG00000007349 16 2 - 1.000 - - - 1.000 - - - doublesex and mab-3 related transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050511-1]
7. dnase1l3l dnase1l3l 16 2 - - - - 1.000 1.000 - - -
8. VMO1 VMO1 11 2 - - - - 1.000 1.000 - - -
9. si:dkeyp-33e11.1 6 2 - 1.000 - - - 1.000 - - - si:dkeyp-33e11.1, transcript variant X3
10. gdf9 ENSDARG00000003229 4 2 - - - - - 1.000 - - 1.000 growth differentiation factor 9 [Source:ZFIN;Acc:ZDB-GENE-050221-7]
11. EXD1 ENSDARG00000098669 27 1.941 - 0.941 - - - 1.000 - - - exonuclease 3'-5' domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060825-267]
12. BX537350.1 BX537350.1 8 1.897 - - - - - 1.000 - - 0.897
13. CABZ01057951.1 CABZ01057951.1 10 1.897 - 1.000 - - - - - - 0.897
14. radil ENSDARG00000079779 14 1.891 - - 0.994 - - - - - 0.897 Ras association and DIL domains [Source:ZFIN;Acc:ZDB-GENE-071206-1]
15. NFATC4 ENSDARG00000054162 44 1.873 - 1.000 - - - 0.873 - - - nuclear factor of activated T cells 4 [Source:ZFIN;Acc:ZDB-GENE-070912-659]
16. b3galtla b3galtla 111 1.859 - 1.000 0.859 - - - - - -
17. NBL1 428 1.786 - 0.813 0.973 - - - - - - neuroblastoma 1, DAN family BMP antagonist
18. ZC3H8 ZC3H8 114 1.771 - - - - 0.771 1.000 - - -
19. znf512 ENSDARG00000041910 20 1.77 - 0.770 - - - 1.000 - - - zinc finger protein 512 [Source:ZFIN;Acc:ZDB-GENE-041014-346]
20. cers4a ENSDARG00000031387 19 1.747 - - - - - 1.000 - - 0.747 ceramide synthase 4a [Source:ZFIN;Acc:ZDB-GENE-020808-1]
21. nudt18 ENSDARG00000041576 61 1.747 - - - - 0.747 1.000 - - - nudix (nucleoside diphosphate linked moiety X)-type motif 18 [Source:ZFIN;Acc:ZDB-GENE-050417-388]
22. cdk5r1a ENSDARG00000037916 46 1.746 - 1.000 - - - 0.746 - - - cyclin-dependent kinase 5, regulatory subunit 1a (p35) [Source:ZFIN;Acc:ZDB-GENE-080723-17]
23. si:ch211-198c19.2 si:ch211-198c19.2 165 1.746 - 1.000 0.746 - - - - - -
24. HIPK1 HIPK1 8 1.739 - - - - - 1.000 - - 0.739
25. zgc:110130 ENSDARG00000039203 352 1.737 - 0.933 0.804 - - - - - - zgc:110130 [Source:ZFIN;Acc:ZDB-GENE-050522-208]
26. spi1a ENSDARG00000067797 113 1.724 - 0.880 - - - 0.844 - - - Spi-1 proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-060825-351]
27. fscn1b ENSDARG00000037747, ENSDARG00000111370 75 1.718 - 0.852 0.866 - - - - - - fascin actin-bundling protein 1b [Source:ZFIN;Acc:ZDB-GENE-120507-1]
28. golga2 ENSDARG00000063197 30 1.667 - 0.794 - - - 0.873 - - - golgin A2 [Source:ZFIN;Acc:ZDB-GENE-081030-1]
29. si:dkey-4c23.3 ENSDARG00000092028, ENSDARG00000110418 4 1.641 - - - - - 0.744 - - 0.897 si:dkey-4c23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-668]
30. ATP5J2 68 1.636 - - 0.919 - - 0.717 - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F2
31. trmt1 ENSDARG00000010978 72 1.561 - - 0.717 - 0.844 - - - - tRNA methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060810-40]
32. PEG3_27 PEG3_27 10 1.523 - - - - - 0.717 - - 0.806
33. tmem107l ENSDARG00000088398, ENSDARG00000109909 208 1.489 - - 0.710 - - 0.779 - - - transmembrane protein 107 like [Source:ZFIN;Acc:ZDB-GENE-090313-269]
34. fem1a ENSDARG00000067966 11 1 - - - - - 1.000 - - - fem-1 homolog a (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-030131-5824]
35. si:dkey-216e24.4 si:dkey-216e24.4 14 1 - - - - 1.000 - - - -
36. ifnphi1 ENSDARG00000025607 6 1 - 1.000 - - - - - - - interferon phi 1 [Source:ZFIN;Acc:ZDB-GENE-030721-3]
37. si:ch211-239j9.1 ENSDARG00000096319 27 1 - 1.000 - - - - - - - si:ch211-239j9.1 [Source:ZFIN;Acc:ZDB-GENE-120215-212]
38. si:ch211-283g2.2 ENSDARG00000108340, ENSDARG00000108953 59 1 - 1.000 - - - - - - - si:ch211-283g2.2 [Source:ZFIN;Acc:ZDB-GENE-060526-151]
39. rbck1 ENSDARG00000031954 95 1 - - - - - 1.000 - - - RanBP-type and C3HC4-type zinc finger containing 1 [Source:ZFIN;Acc:ZDB-GENE-040704-3]
40. im:7141269 ENSDARG00000101756 30 1 - 1.000 - - - - - - - im:7141269 [Source:ZFIN;Acc:ZDB-GENE-041111-134]
41. BX323882.1 ENSDARG00000101656 2 1 - - - - - 1.000 - - - butyrophilin subfamily 2 member A2-like [Source:NCBI gene;Acc:563995]
42. pcdh1g18 ENSDARG00000099447 7 1 - 1.000 - - - - - - - protocadherin 1 gamma 18 [Source:ZFIN;Acc:ZDB-GENE-050609-13]
43. KIF2A_1 ENSDARG00000043571 189 1 - 1.000 - - - - - - - kinesin family member 2A [Source:HGNC Symbol;Acc:HGNC:6318]
44. rgs8 ENSDARG00000070037, ENSDARG00000111478 37 1 - 1.000 - - - - - - - regulator of G protein signaling 8 [Source:ZFIN;Acc:ZDB-GENE-040718-264]
45. si:dkey-71h2.2 ENSDARG00000043394 11 1 - 1.000 - - - - - - - si:dkey-71h2.2 [Source:ZFIN;Acc:ZDB-GENE-041014-145]
46. si:dkey-165b20.3 ENSDARG00000099544 6 1 - 1.000 - - - - - - - si:dkey-165b20.3 [Source:ZFIN;Acc:ZDB-GENE-110913-172]
47. hlcs ENSDARG00000039934 2 1 - - - - - 1.000 - - - holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase) [Source:ZFIN;Acc:ZDB-GENE-030131-5333]
48. si:ch211-120c15.1 si:ch211-120c15.1 20 1 - 1.000 - - - - - - -
49. CU652893.1 ENSDARG00000104131 3 1 - 1.000 - - - - - - -
50. pcyox1 ENSDARG00000103052 20 1 - 1.000 - - - - - - - prenylcysteine oxidase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-98]
51. atp2b2 ENSDARG00000044902, ENSDARG00000063433 140 1 - 1.000 - - - - - - - ATPase plasma membrane Ca2+ transporting 2 [Source:ZFIN;Acc:ZDB-GENE-061016-1]
52. CABZ01007222.1 CABZ01007222.1 78 1 - 1.000 - - - - - - -
53. si:ch211-262i10.3 si:ch211-262i10.3 1 1 - - - - - 1.000 - - -
54. si:dkeyp-51f12.2 ENSDARG00000095606 24 1 - 1.000 - - - - - - - si:dkeyp-51f12.2 [Source:ZFIN;Acc:ZDB-GENE-070705-546]
55. C24H11orf65 C24H11orf65 1 1 - 1.000 - - - - - - -
56. BX321870.1 ENSDARG00000098519 9 1 - 1.000 - - - - - - -
57. C12H7orf62 C12H7orf62 2 1 - - - - - 1.000 - - -
58. U6_28 U6_28 1 1 - - - - - 1.000 - - -
59. ugt5c1 ENSDARG00000061444 6 1 - - - - - 1.000 - - - UDP glucuronosyltransferase 5 family, polypeptide C1 [Source:ZFIN;Acc:ZDB-GENE-050419-68]
60. fam5b fam5b 45 1 - 1.000 - - - - - - -
61. LMTK3 LMTK3 222 1 - 1.000 - - - - - - -
62. gabrb3 ENSDARG00000023771, ENSDARG00000114822 180 1 - 1.000 - - - - - - - gamma-aminobutyric acid (GABA) A receptor, beta 3 [Source:ZFIN;Acc:ZDB-GENE-101102-2]
63. GADD45G_1 GADD45G_1 236 1 - 1.000 - - - - - - -
64. si:dkeyp-104f11.7 si:dkeyp-104f11.7 4 1 - 1.000 - - - - - - -
65. si:dkeyp-106c3.1 ENSDARG00000090623 225 1 - 1.000 - - - - - - - si:dkeyp-106c3.1 [Source:ZFIN;Acc:ZDB-GENE-050411-73]
66. CABZ01068324.1 CABZ01068324.1 4 1 - 1.000 - - - - - - -
67. si:ch211-89o5.1 si:ch211-89o5.1 91 1 - - - - - 1.000 - - -
68. SAMHD1 ENSDARG00000071288 0 1 - 1.000 - - - - - - - SAM domain and HD domain 1 [Source:ZFIN;Acc:ZDB-GENE-090313-386]
69. GRIN2B GRIN2B 140 1 - 1.000 - - - - - - -
70. PCBP3 ENSDARG00000054378 17 1 - - - - - 1.000 - - - poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]
71. abcc9 ENSDARG00000015985 20 1 - 1.000 - - - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 9 [Source:ZFIN;Acc:ZDB-GENE-050517-23]
72. lama3 ENSDARG00000071462 1 1 - 1.000 - - - - - - - laminin, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050208-475]
73. CU457778.1 ENSDARG00000098976 38 1 - 1.000 - - - - - - - uncharacterized LOC100535115 [Source:NCBI gene;Acc:100535115]
74. CABZ01064968.3 CABZ01064968.3 4 1 - - - - 1.000 - - - -
75. MFAP4_3 MFAP4_3 7 1 - 1.000 - - - - - - -
76. brwd3 ENSDARG00000035540 92 1 - - - - - 1.000 - - - bromodomain and WD repeat domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100921-43]
77. hoxa4a 37 1 - - - - - 1.000 - - - homeobox A4a, transcript variant X4
78. zgc:153704 ENSDARG00000045979 11 1 - - - - - 1.000 - - - zgc:153704 [Source:ZFIN;Acc:ZDB-GENE-060929-1114]
79. HABP4 HABP4 33 1 - - - - - 1.000 - - -
80. nmrk1 ENSDARG00000037913 18 1 - 1.000 - - - - - - - nicotinamide riboside kinase 1 [Source:ZFIN;Acc:ZDB-GENE-050320-8]
81. ABHD12B_1 ABHD12B_1 57 1 - 1.000 - - - - - - -
82. GABRA3 ENSDARG00000090883 5 1 - 1.000 - - - - - - - gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
83. vcam1 vcam1 243 1 - 1.000 - - - - - - -
84. SNORD30 SNORD30 34 1 - 1.000 - - - - - - -
85. LRFN4 LRFN4 59 1 - 1.000 - - - - - - -
86. CR318593.1_1 CR318593.1_1 8 1 - - - - - 1.000 - - -
87. ldhbb ENSDARG00000071076 31 1 - - - - - 1.000 - - - lactate dehydrogenase Bb [Source:ZFIN;Acc:ZDB-GENE-040718-176]
88. cyp27a7 ENSDARG00000033802 216 1 - 1.000 - - - - - - - cytochrome P450, family 27, subfamily A, polypeptide 7 [Source:ZFIN;Acc:ZDB-GENE-081104-519]
89. cyp46a4 cyp46a4 5 1 - - - - - 1.000 - - -
90. ptpn6_1 ENSDARG00000089043 22 1 - 1.000 - - - - - - - protein tyrosine phosphatase, non-receptor type 6 [Source:ZFIN;Acc:ZDB-GENE-030131-7513]
91. n6amt2 7 1 - 1.000 - - - - - - - N-6 adenine-specific DNA methyltransferase 2 (putative), transcript variant X1
92. slc15a1a ENSDARG00000100315 23 1 - 1.000 - - - - - - - solute carrier family 15 (oligopeptide transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-091204-9]
93. raf1a ENSDARG00000096415, ENSDARG00000102328 2 1 - - - - - 1.000 - - - Raf-1 proto-oncogene, serine/threonine kinase a [Source:ZFIN;Acc:ZDB-GENE-990415-41]
94. BX000703.2 BX000703.2 10 1 - 1.000 - - - - - - -
95. si:ch211-222f23.6 ENSDARG00000042880 3 1 - - - - - 1.000 - - - si:ch211-222f23.6 [Source:ZFIN;Acc:ZDB-GENE-070912-208]
96. itih6 ENSDARG00000056037 3 1 - 1.000 - - - - - - - inter-alpha-trypsin inhibitor heavy chain family, member 6 [Source:ZFIN;Acc:ZDB-GENE-050603-1]
97. tmem199 ENSDARG00000069314, ENSDARG00000112510 36 1 - 1.000 - - - - - - - transmembrane protein 199 [Source:ZFIN;Acc:ZDB-GENE-050522-150]
98. BX569789.4 BX569789.4 3 1 - 1.000 - - - - - - -
99. pabpn1l ENSDARG00000087996, ENSDARG00000113382 40 1 - - - - - 1.000 - - - poly(A) binding protein, nuclear 1-like (cytoplasmic) [Source:ZFIN;Acc:ZDB-GENE-080709-5]
100. CT027800.1 CT027800.1 36 1 - 1.000 - - - - - - -

There are 892 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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