Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-152p23.2

Gene Name Gene ID Reads Annotation
si:ch211-152p23.2 ENSDARG00000094519 4 si:ch211-152p23.2 [Source:ZFIN;Acc:ZDB-GENE-081104-134]










Genes with expression patterns similar to si:ch211-152p23.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-152p23.2 ENSDARG00000094519 4 3 1.000 - - - - - 1.000 - 1.000 si:ch211-152p23.2 [Source:ZFIN;Acc:ZDB-GENE-081104-134]
2. kcnj1a.1 ENSDARG00000091232 110 1.849 0.959 - - - - - 0.890 - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-031118-55]
3. si:ch211-197h24.7 si:ch211-197h24.7 25 1.807 - - - - - - 1.000 - 0.807
4. atp8b5b 55 1.746 0.974 - - - - - 0.772 - - ATPase, class I, type 8B, member 5b
5. ccl-c5a ccl-c5a 217 1.732 0.948 - - - - - 0.784 - -
6. esrrb ENSDARG00000100847 636 1.731 0.844 - - - - - 0.887 - - estrogen-related receptor beta [Source:ZFIN;Acc:ZDB-GENE-040616-2]
7. cryba1l1 ENSDARG00000032929 1868 1.718 0.905 - - - - - 0.813 - - crystallin, beta A1, like 1 [Source:ZFIN;Acc:ZDB-GENE-050417-249]
8. sst2 ENSDARG00000014190 617 1.711 1.000 - - - - - 0.711 - - somatostatin 2 [Source:ZFIN;Acc:ZDB-GENE-010219-2]
9. si:ch211-163l21.8 ENSDARG00000042899 724 1.701 0.777 - - - - - 0.924 - - si:ch211-163l21.8 [Source:ZFIN;Acc:ZDB-GENE-041008-93]
10. cox5b2 ENSDARG00000068738 182 1.682 0.968 - - - - - 0.714 - - cytochrome c oxidase subunit 5B2 [Source:ZFIN;Acc:ZDB-GENE-060825-71]
11. STYK1_1 STYK1_1 34 1.642 0.876 - - - - - 0.766 - -
12. nphp4 ENSDARG00000069014 77 1.636 0.863 - - - - - 0.773 - - nephronophthisis 4 [Source:ZFIN;Acc:ZDB-GENE-060503-715]
13. cox6a2 ENSDARG00000054588, ENSDARG00000116120 121 1.628 0.853 - - - - - 0.775 - - cytochrome c oxidase subunit 6A2 [Source:ZFIN;Acc:ZDB-GENE-040912-129]
14. PIK3R6 PIK3R6 149 1.599 0.827 - - - - - 0.772 - -
15. FP017194.1 FP017194.1 52 1.589 0.863 - - - - - 0.726 - -
16. setd6 ENSDARG00000043986, ENSDARG00000113991 194 1.536 0.822 - - - - - 0.714 - - SET domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-1067]
17. bbs2 ENSDARG00000041621, ENSDARG00000110124 321 1.511 0.811 - - - - - 0.700 - - Bardet-Biedl syndrome 2 [Source:ZFIN;Acc:ZDB-GENE-020801-1]
18. rsph3 ENSDARG00000043470 74 1.5 0.778 - - - - - 0.722 - - radial spoke head 3 homolog [Source:ZFIN;Acc:ZDB-GENE-040724-173]
19. FOXN2 FOXN2 118 1.495 0.742 - - - - - 0.753 - -
20. si:ch73-103b9.2 ENSDARG00000092489 89 1.478 0.757 - - - - - 0.721 - - si:ch73-103b9.2 [Source:ZFIN;Acc:ZDB-GENE-070705-199]
21. ccdc40 ENSDARG00000100584, ENSDARG00000113983 167 1.435 0.725 - - - - - 0.710 - - coiled-coil domain containing 40 [Source:ZFIN;Acc:ZDB-GENE-060503-723]
22. CU915778.2 CU915778.2 194 1 1.000 - - - - - - - -
23. ENSDARG00000089152 ENSDARG00000089152 12 1 1.000 - - - - - - - -
24. CABZ01067072.1 CABZ01067072.1 17 1 1.000 - - - - - - - -
25. SLC38A8 SLC38A8 17 1 1.000 - - - - - - - -
26. sema6d ENSDARG00000002748 133 1 1.000 - - - - - - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D [Source:ZFIN;Acc:ZDB-GENE-040426-1933]
27. si:dkey-71l1.1 ENSDARG00000052411 11 1 1.000 - - - - - - - - si:dkey-71l1.1 [Source:ZFIN;Acc:ZDB-GENE-070705-489]
28. rundc3b ENSDARG00000009961 10 1 - - - - - - - - 1.000 RUN domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-041114-121]
29. crybb1l2 ENSDARG00000016793 723 1 1.000 - - - - - - - - crystallin, beta B1, like 2 [Source:ZFIN;Acc:ZDB-GENE-070822-18]
30. rgs9a ENSDARG00000037925 3 1 - - - - - - - - 1.000 regulator of G protein signaling 9a [Source:ZFIN;Acc:ZDB-GENE-060929-92]
31. crygmx ENSDARG00000053862 482 1 1.000 - - - - - - - - crystallin, gamma MX [Source:ZFIN;Acc:ZDB-GENE-030131-7732]
32. si:dkey-105n5.3 si:dkey-105n5.3 9 1 1.000 - - - - - - - -
33. zgc:110353 ENSDARG00000039443 80 1 1.000 - - - - - - - - zgc:110353 [Source:ZFIN;Acc:ZDB-GENE-050417-310]
34. lamb1a_1 ENSDARG00000101209 13 1 1.000 - - - - - - - - laminin, beta 1a [Source:ZFIN;Acc:ZDB-GENE-021226-1]
35. tacr2 ENSDARG00000074509, ENSDARG00000109849, ENSDARG00000112566 4 1 1.000 - - - - - - - - tachykinin receptor 2 [Source:ZFIN;Acc:ZDB-GENE-090312-188]
36. CYP46A1 CYP46A1 16 1 1.000 - - - - - - - -
37. zgc:113425 ENSDARG00000026616 29 1 1.000 - - - - - - - - zgc:113425 [Source:ZFIN;Acc:ZDB-GENE-050320-128]
38. ft2 ENSDARG00000109567 5 1 1.000 - - - - - - - - alpha(1,3)fucosyltransferase gene 2 [Source:ZFIN;Acc:ZDB-GENE-990715-18]
39. SLC22A14 SLC22A14 24 1 1.000 - - - - - - - -
40. ftr08 ENSDARG00000077412 1 1 - - - - - - - - 1.000 finTRIM family, member 8 [Source:ZFIN;Acc:ZDB-GENE-070912-230]
41. mir30b 4 1 1.000 - - - - - - - - microRNA 30b
42. stk33 ENSDARG00000054318, ENSDARG00000114909 34 1 1.000 - - - - - - - - serine/threonine kinase 33 [Source:ZFIN;Acc:ZDB-GENE-040724-242]
43. slc6a19a slc6a19a 41 1 - - - - - - 1.000 - -
44. otx1a 1607 1 1.000 - - - - - - - - orthodenticle homeobox 1a
45. slc25a1a ENSDARG00000057110 6 1 - - - - - - - - 1.000 solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1172]
46. slc5a8l ENSDARG00000003697, ENSDARG00000110685 69 1 1.000 - - - - - - - - solute carrier family 5 (iodide transporter), member 8-like [Source:ZFIN;Acc:ZDB-GENE-061110-98]
47. FRMPD2 ENSDARG00000074119 5 1 1.000 - - - - - - - - FERM and PDZ domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-110315-2]
48. CR352256.1 CR352256.1 3 1 1.000 - - - - - - - -
49. socs1a ENSDARG00000038095 20 1 1.000 - - - - - - - - suppressor of cytokine signaling 1a [Source:ZFIN;Acc:ZDB-GENE-040801-205]
50. TEAD1 TEAD1 43 1 1.000 - - - - - - - -
51. znf330 ENSDARG00000020494 3 1 - - - - - - - - 1.000 zinc finger protein 330 [Source:ZFIN;Acc:ZDB-GENE-040426-2697]
52. si:ch211-171b20.3 ENSDARG00000094794 2 1 1.000 - - - - - - - - si:ch211-171b20.3 [Source:ZFIN;Acc:ZDB-GENE-091204-278]
53. kcnc1b ENSDARG00000032959, ENSDARG00000113595 36 1 1.000 - - - - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 1b [Source:ZFIN;Acc:ZDB-GENE-080414-3]
54. CU695006.1 CU695006.1 4 1 - - - - - - - - 1.000
55. ugt2b3 46 1 1.000 - - - - - - - - UDP glucuronosyltransferase 2 family, polypeptide B3
56. ECM1_1 ECM1_1 4 1 - - - - - - - - 1.000
57. FP103003.1_1 FP103003.1_1 6 1 1.000 - - - - - - - -
58. cnot7 ENSDARG00000032116, ENSDARG00000115413 184 1 1.000 - - - - - - - - CCR4-NOT transcription complex, subunit 7 [Source:ZFIN;Acc:ZDB-GENE-061013-29]
59. ncf4 ENSDARG00000040812, ENSDARG00000110339 45 1 1.000 - - - - - - - - neutrophil cytosolic factor 4 [Source:ZFIN;Acc:ZDB-GENE-041124-1]
60. admb ENSDARG00000069027 67 1 1.000 - - - - - - - - adrenomedullin b [Source:ZFIN;Acc:ZDB-GENE-120221-6]
61. npdc1 npdc1 221 1 1.000 - - - - - - - -
62. cacng3a ENSDARG00000058460 2 1 - - - - - - - - 1.000 calcium channel, voltage-dependent, gamma subunit 3a [Source:ZFIN;Acc:ZDB-GENE-090312-124]
63. si:dkey-247i3.6 ENSDARG00000092139, ENSDARG00000094308, ENSDARG00000100214 22 1 1.000 - - - - - - - - si:dkey-247i3.6 [Source:ZFIN;Acc:ZDB-GENE-110913-83]
64. bcl9l ENSDARG00000055054 128 1 1.000 - - - - - - - - B cell CLL/lymphoma 9-like [Source:ZFIN;Acc:ZDB-GENE-040927-29]
65. syt15 ENSDARG00000079926 8 1 - - - - - - - - 1.000 synaptotagmin XV [Source:ZFIN;Acc:ZDB-GENE-090527-2]
66. cyp3a65 ENSDARG00000103295 7 1 - - - - - - - - 1.000 cytochrome P450, family 3, subfamily A, polypeptide 65 [Source:ZFIN;Acc:ZDB-GENE-050604-1]
67. CU469313.1 CU469313.1 1 1 - - - - - - - - 1.000
68. si:dkey-46g23.3 si:dkey-46g23.3 16 1 - - - - - - - - 1.000
69. nr2e1 ENSDARG00000017107 340 1 1.000 - - - - - - - - nuclear receptor subfamily 2, group E, member 1 [Source:ZFIN;Acc:ZDB-GENE-040801-127]
70. ano2 ENSDARG00000101363 50 1 - - - - - - 1.000 - - anoctamin 2 [Source:ZFIN;Acc:ZDB-GENE-060503-62]
71. si:dkey-162h11.2 si:dkey-162h11.2 257 1 1.000 - - - - - - - -
72. dnah11 ENSDARG00000077384, ENSDARG00000094282 15 1 - - - - - - - - 1.000 dynein, axonemal, heavy chain 11 [Source:ZFIN;Acc:ZDB-GENE-100922-8]
73. C5H9orf9 C5H9orf9 6 1 1.000 - - - - - - - -
74. si:dkey-3d18.5 ENSDARG00000096239 3 1 1.000 - - - - - - - - si:dkey-3d18.5 [Source:ZFIN;Acc:ZDB-GENE-120215-143]
75. si:ch211-196c10.13 ENSDARG00000096756 28 1 1.000 - - - - - - - - si:ch211-196c10.13 [Source:ZFIN;Acc:ZDB-GENE-130603-71]
76. si:ch211-106h4.4 ENSDARG00000093629 9 1 - - - - - - - - 1.000 si:ch211-106h4.4 [Source:ZFIN;Acc:ZDB-GENE-070705-14]
77. BX601644.1 ENSDARG00000090632 2 1 1.000 - - - - - - - - cytokine receptor-like factor 2 [Source:NCBI gene;Acc:100294510]
78. zgc:153738 ENSDARG00000069230 84 1 - - - - - - 1.000 - - zgc:153738 [Source:ZFIN;Acc:ZDB-GENE-061013-622]
79. NOD1 ENSDARG00000036308 1 1 - - - - - - - - 1.000 nucleotide-binding oligomerization domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-071116-9]
80. CDHR5 CDHR5 2 1 - - - - - - - - 1.000
81. si:dkey-3b8.4 si:dkey-3b8.4 13 1 1.000 - - - - - - - -
82. CT027762.3_1 CT027762.3_1 62 1 1.000 - - - - - - - -
83. GOLT1A ENSDARG00000088933 14 1 - - - - - - - - 1.000 golgi transport 1A [Source:ZFIN;Acc:ZDB-GENE-141212-320]
84. casp8l1 2 1 - - - - - - - - 1.000 caspase 8, apoptosis-related cysteine peptidase, like 1, transcript variant X1
85. si:dkeyp-73d8.8 ENSDARG00000094045 17 1 1.000 - - - - - - - - si:dkeyp-73d8.8 [Source:ZFIN;Acc:ZDB-GENE-070912-684]
86. si:dkey-43b14.9 si:dkey-43b14.9 1 1 - - - - - - - - 1.000
87. zgc:153921_1 ENSDARG00000020738, ENSDARG00000038405 19 1 1.000 - - - - - - - - zgc:153921 [Source:ZFIN;Acc:ZDB-GENE-060929-816]
88. TFPT ENSDARG00000089572, ENSDARG00000111694 112 1 1.000 - - - - - - - - TCF3 (E2A) fusion partner [Source:ZFIN;Acc:ZDB-GENE-140106-241]
89. SPAG16 7 1 1.000 - - - - - - - - sperm associated antigen 16
90. si:dkeyp-33e11.1 6 1 - - - - - - - - 1.000 si:dkeyp-33e11.1, transcript variant X3
91. si:dkey-236e20.3 ENSDARG00000071495, ENSDARG00000109868 1 1 - - - - - - - - 1.000 si:dkey-236e20.3 [Source:ZFIN;Acc:ZDB-GENE-060503-722]
92. PLB1 PLB1 20 1 1.000 - - - - - - - -
93. C10H5orf42 C10H5orf42 5 1 1.000 - - - - - - - -
94. pcolce2b ENSDARG00000055575 2 1 1.000 - - - - - - - - procollagen C-endopeptidase enhancer 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1177]
95. CU856173.1 CU856173.1 26 1 - - - - - - 1.000 - -
96. akap1a ENSDARG00000089802 5 1 - - - - - - - - 1.000 A kinase (PRKA) anchor protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5980]
97. tcf23 ENSDARG00000087381 6 1 1.000 - - - - - - - - transcription factor 23 [Source:ZFIN;Acc:ZDB-GENE-090806-5]
98. CU855821.2 CU855821.2 21 1 - - - - - - 1.000 - -
99. frmd4bb ENSDARG00000076496 18 1 - - - - - - - - 1.000 FERM domain containing 4Bb [Source:ZFIN;Acc:ZDB-GENE-100921-74]
100. si:dkey-37o8.1 ENSDARG00000071727 64 1 1.000 - - - - - - - - si:dkey-37o8.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5667]

There are 592 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA