Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-152p11.8

Gene Name Gene ID Reads Annotation
si:ch211-152p11.8 46 si:ch211-152p11.8, transcript variant X2










Genes with expression patterns similar to si:ch211-152p11.8

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-152p11.8 46 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-152p11.8, transcript variant X2
2. ubxn1_1 ENSDARG00000090309 38 1.892 - 0.908 - - - - 0.984 - - UBX domain protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-792]
3. C23H1orf192 C23H1orf192 60 1.805 - - 0.805 - - 1.000 - - -
4. KCNK2 KCNK2 89 1.729 - - - - 0.842 - 0.887 - -
5. CT573263.1 ENSDARG00000112940 108 1.72 - - - - 0.862 - 0.858 - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:108184006]
6. si:dkey-11f4.16 ENSDARG00000099799 121 1.715 - 0.785 - - - - - - 0.930 si:dkey-11f4.16 [Source:ZFIN;Acc:ZDB-GENE-070912-357]
7. gcnt3 ENSDARG00000060471 37 1.714 - - - - - 0.781 0.933 - - glucosaminyl (N-acetyl) transferase 3, mucin type [Source:ZFIN;Acc:ZDB-GENE-110411-253]
8. ppp2r3a ENSDARG00000077722 7 1.714 - - - - - - 0.933 - 0.781 protein phosphatase 2, regulatory subunit B'', alpha [Source:ZFIN;Acc:ZDB-GENE-070912-646]
9. BX511257.1 BX511257.1 66 1.711 - 0.711 - - - 1.000 - - -
10. lratb 3 1.681 - 0.748 - - - - 0.933 - - lecithin retinol acyltransferase b (phosphatidylcholine-retinol O-acyltransferase), transcript variant X2
11. pxn pxn 10 1.681 - 0.748 - - - - 0.933 - -
12. EP400 ENSDARG00000100965 45 1.678 - - 0.745 - - - 0.933 - - E1A binding protein p400 [Source:ZFIN;Acc:ZDB-GENE-081104-186]
13. zgc:112966 ENSDARG00000095369, ENSDARG00000099057, ENSDARG00000101612 7 1.67 - 0.748 0.922 - - - - - - zgc:112966 [Source:ZFIN;Acc:ZDB-GENE-050320-137]
14. rdh14a ENSDARG00000039299 79 1.664 - - - - - 0.797 0.867 - - retinol dehydrogenase 14a [Source:ZFIN;Acc:ZDB-GENE-041010-124]
15. sod3b ENSDARG00000079183 39 1.662 - - - - - - 0.922 0.740 - superoxide dismutase 3, extracellular b [Source:ZFIN;Acc:ZDB-GENE-030131-8743]
16. disp2 ENSDARG00000042846 53 1.661 - 0.748 - - - - 0.913 - - dispatched homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030915-1]
17. mlycd ENSDARG00000104732, ENSDARG00000117073 5 1.659 - 0.748 - - - - 0.911 - - malonyl-CoA decarboxylase [Source:ZFIN;Acc:ZDB-GENE-070410-120]
18. aspdh ENSDARG00000038297 39 1.653 - - - - 0.850 - 0.803 - - aspartate dehydrogenase domain containing [Source:ZFIN;Acc:ZDB-GENE-040912-102]
19. usp20 ENSDARG00000027501, ENSDARG00000116822 211 1.651 - - - - 0.800 - 0.851 - - ubiquitin specific peptidase 20 [Source:ZFIN;Acc:ZDB-GENE-040426-1219]
20. si:ch211-117l17.4 ENSDARG00000103534 24 1.648 - - - - - 0.867 - - 0.781 si:ch211-117l17.4 [Source:ZFIN;Acc:ZDB-GENE-110913-102]
21. C24H16orf11 C24H16orf11 32 1.636 - 0.712 - - 0.924 - - - -
22. mtmr10 ENSDARG00000010601 37 1.619 - 0.706 - - 0.913 - - - - myotubularin related protein 10 [Source:ZFIN;Acc:ZDB-GENE-061103-52]
23. FNDC3A ENSDARG00000105503 11 1.618 - - - - - 0.867 - - 0.751 fibronectin type III domain containing 3A [Source:ZFIN;Acc:ZDB-GENE-030131-7015]
24. si:ch211-219a15.3 ENSDARG00000087659 12 1.615 - 0.748 - - - 0.867 - - - si:ch211-219a15.3 [Source:ZFIN;Acc:ZDB-GENE-060503-214]
25. si:dkeyp-25a3.1 si:dkeyp-25a3.1 4 1.606 - - - - - 0.825 - - 0.781
26. nt5e ENSDARG00000071017 18 1.598 - 0.785 0.813 - - - - - - 5'-nucleotidase, ecto (CD73) [Source:ZFIN;Acc:ZDB-GENE-040426-1261]
27. BX088691.1 BX088691.1 9 1.597 - 0.748 - - - - 0.849 - -
28. PLEKHA2 PLEKHA2 43 1.594 - - - - - 0.736 0.858 - -
29. poc5 ENSDARG00000059982 569 1.581 - 0.820 - - - 0.761 - - - POC5 centriolar protein homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-060526-135]
30. grnas ENSDARG00000091885 71 1.579 - - 0.734 - - - 0.845 - - granulin antisense [Source:ZFIN;Acc:ZDB-GENE-060104-1]
31. CR388046.3 ENSDARG00000105537 108 1.563 - - - - - - 0.793 0.770 -
32. si:ch211-181d7.1 ENSDARG00000088274, ENSDARG00000091847 18 1.554 - - - - - - 0.815 - 0.739 si:ch211-181d7.1 [Source:ZFIN;Acc:ZDB-GENE-121214-14]
33. ddr2a ENSDARG00000100693 236 1.552 - 0.827 - - 0.725 - - - - discoidin domain receptor tyrosine kinase 2a [Source:ZFIN;Acc:ZDB-GENE-090316-2]
34. rab11fip1a ENSDARG00000046124 69 1.549 - - - - - 0.766 0.783 - - RAB11 family interacting protein 1 (class I) a [Source:ZFIN;Acc:ZDB-GENE-051113-116]
35. palb2 ENSDARG00000076716 170 1.528 - - - - - 0.714 0.814 - - partner and localizer of BRCA2 [Source:ZFIN;Acc:ZDB-GENE-090313-43]
36. EPS8 78 1.523 - - - - - 0.791 0.732 - - epidermal growth factor receptor pathway substrate 8, transcript variant X14
37. cables2b ENSDARG00000017154 131 1.522 - - 0.785 - - - 0.737 - - Cdk5 and Abl enzyme substrate 2b [Source:ZFIN;Acc:ZDB-GENE-090313-249]
38. crispld1b ENSDARG00000013293 200 1.519 - 0.743 - - 0.776 - - - - cysteine-rich secretory protein LCCL domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1204]
39. si:ch211-165d12.4 ENSDARG00000079353 330 1.516 - - 0.739 - - - 0.777 - - si:ch211-165d12.4 [Source:ZFIN;Acc:ZDB-GENE-080303-7]
40. ntf7 ntf7 72 1.508 - - - - - 0.776 0.732 - -
41. C25H12orf5 C25H12orf5 65 1.506 - - - - - 0.781 0.725 - -
42. zgc:91999 ENSDARG00000105001 129 1.503 - 0.740 - - 0.763 - - - - zgc:91999 [Source:ZFIN;Acc:ZDB-GENE-040801-241]
43. ppp1r11 ENSDARG00000036063 587 1.489 - - - - 0.715 0.774 - - - protein phosphatase 1, regulatory (inhibitor) subunit 11 [Source:ZFIN;Acc:ZDB-GENE-050417-99]
44. tapt1b ENSDARG00000061143, ENSDARG00000109798, ENSDARG00000112241 482 1.484 - - - - 0.723 - 0.761 - - transmembrane anterior posterior transformation 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4025]
45. si:ch211-253p18.2 ENSDARG00000092770 21 1.469 - 0.748 - - - 0.721 - - - si:ch211-253p18.2 [Source:ZFIN;Acc:ZDB-GENE-041001-106]
46. FAM183B FAM183B 25 1.461 - - 0.760 0.701 - - - - -
47. si:dkey-165i8.5 si:dkey-165i8.5 21 1.458 - 0.748 - - - - 0.710 - -
48. tlr4ba ENSDARG00000019742, ENSDARG00000113084 20 1 - - - - - - 1.000 - - toll-like receptor 4b, duplicate a [Source:ZFIN;Acc:ZDB-GENE-040219-8]
49. dio2 ENSDARG00000094857 17 1 - - - - - - 1.000 - - iodothyronine deiodinase 2 [Source:ZFIN;Acc:ZDB-GENE-030327-4]
50. kcnip3a ENSDARG00000034229 63 1 - - - - - - 1.000 - - Kv channel interacting protein 3a, calsenilin [Source:ZFIN;Acc:ZDB-GENE-040426-1791]
51. CR854827.2 ENSDARG00000097227 15 1 - - - - - 1.000 - - -
52. mctp1b ENSDARG00000060871 20 1 - - - - - - 1.000 - - multiple C2 domains, transmembrane 1b [Source:ZFIN;Acc:ZDB-GENE-090313-382]
53. CU856173.1 CU856173.1 26 1 - 1.000 - - - - - - -
54. si:ch211-22k7.1 si:ch211-22k7.1 30 1 - - - - - 1.000 - - -
55. si:ch73-60p2.1 si:ch73-60p2.1 21 1 - - - - - - 1.000 - -
56. mkks ENSDARG00000016139 70 1 - - - - - 1.000 - - - McKusick-Kaufman syndrome [Source:ZFIN;Acc:ZDB-GENE-040426-757]
57. si:ch211-63o20.7 ENSDARG00000042000 93 1 - - - - - - 1.000 - - si:ch211-63o20.7 [Source:ZFIN;Acc:ZDB-GENE-041001-194]
58. NFATC4 ENSDARG00000054162 44 1 - - - - - - 1.000 - - nuclear factor of activated T cells 4 [Source:ZFIN;Acc:ZDB-GENE-070912-659]
59. osgin2 ENSDARG00000040302 45 0.988 - - - - - - 0.988 - - oxidative stress induced growth inhibitor family member 2 [Source:ZFIN;Acc:ZDB-GENE-081028-57]
60. si:ch211-237l4.6 ENSDARG00000056915 49 0.976 - - - - - - 0.976 - - si:ch211-237l4.6 [Source:ZFIN;Acc:ZDB-GENE-040724-42]
61. SLC37A3 176 0.963 - - - - - - 0.963 - - solute carrier family 37 member 3, transcript variant X4
62. CABZ01111953.1 ENSDARG00000099747 38 0.961 - - - - - - 0.961 - - oxysterol-binding protein-related protein 10-like [Source:NCBI gene;Acc:100334085]
63. bmp6 ENSDARG00000015686 211 0.96 - - - - - - 0.960 - - bone morphogenetic protein 6 [Source:ZFIN;Acc:ZDB-GENE-050306-42]
64. kcnt1 ENSDARG00000079484 45 0.96 - - - - - - 0.960 - - potassium channel, subfamily T, member 1 [Source:ZFIN;Acc:ZDB-GENE-091231-1]
65. si:dkey-10p5.7 26 0.96 - - - - - - 0.960 - - si:dkey-10p5.7
66. WNK3 WNK3 36 0.96 - - - - - - 0.960 - -
67. ENSDARG00000092910 ENSDARG00000092910 44 0.96 - - - - - - 0.960 - -
68. traf3ip1 ENSDARG00000010300 69 0.96 - - - - - - 0.960 - - TNF receptor-associated factor 3 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1146]
69. NUFIP1 ENSDARG00000101024 229 0.954 - - - - - - 0.954 - - nuclear fragile X mental retardation protein interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6203]
70. CCDC141 ENSDARG00000095675 94 0.954 - - - - - 0.954 - - - coiled-coil domain containing 141 [Source:ZFIN;Acc:ZDB-GENE-081104-472]
71. WSCD1 ENSDARG00000098113 35 0.948 - - 0.948 - - - - - - WSC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29060]
72. BX510934.1 ENSDARG00000087544 140 0.942 - - - - - - 0.942 - -
73. drd4-rs ENSDARG00000001912 45 0.942 - - - - - - 0.942 - - dopamine receptor D4 related sequence [Source:ZFIN;Acc:ZDB-GENE-051113-172]
74. si:ch211-132g1.6 ENSDARG00000093102 13 0.942 - - - - - 0.942 - - - si:ch211-132g1.6 [Source:ZFIN;Acc:ZDB-GENE-091204-469]
75. CU467982.1 CU467982.1 12 0.938 - - 0.938 - - - - - -
76. rabggta ENSDARG00000061024 332 0.934 - - - - - - 0.934 - - Rab geranylgeranyltransferase subunit alpha [Source:ZFIN;Acc:ZDB-GENE-060929-1042]
77. XKR8 XKR8 9 0.933 - - - - - - 0.933 - -
78. dbpa ENSDARG00000063014 107 0.933 - - - - - - 0.933 - - D site albumin promoter binding protein a [Source:ZFIN;Acc:ZDB-GENE-060503-802]
79. PGBD4_4 PGBD4_4 15 0.933 - - - - - - 0.933 - -
80. or106-10 ENSDARG00000091143, ENSDARG00000111913, ENSDARG00000114806 1 0.933 - - - - - - 0.933 - - odorant receptor, family G, subfamily 106, member 10 [Source:ZFIN;Acc:ZDB-GENE-070806-62]
81. si:dkey-56i24.1 ENSDARG00000053345, ENSDARG00000078152 11 0.933 - - - - - - 0.933 - - si:dkey-56i24.1 [Source:ZFIN;Acc:ZDB-GENE-081105-8]
82. si:dkey-286j17.3 si:dkey-286j17.3 8 0.933 - - - - - - 0.933 - -
83. phf21aa ENSDARG00000006878 31 0.933 - - - - - - 0.933 - - PHD finger protein 21Aa [Source:ZFIN;Acc:ZDB-GENE-050208-99]
84. il11a ENSDARG00000037859 5 0.933 - - - - - - 0.933 - - interleukin 11a [Source:ZFIN;Acc:ZDB-GENE-051019-1]
85. si:dkey-47k20.6 si:dkey-47k20.6 2 0.933 - - - - - - 0.933 - -
86. pigr ENSDARG00000101890 10 0.933 - - - - - - 0.933 - - polymeric immunoglobulin receptor [Source:ZFIN;Acc:ZDB-GENE-060503-327]
87. BX511021.2 ENSDARG00000097646 5 0.933 - - - - - - 0.933 - -
88. si:dkey-122c11.1 ENSDARG00000093747 19 0.933 - - - - - - 0.933 - - si:dkey-122c11.1 [Source:ZFIN;Acc:ZDB-GENE-060531-74]
89. U1_35 U1_35 1 0.933 - - - - - - 0.933 - -
90. cyp2n13 ENSDARG00000042953 10 0.933 - - - - - - 0.933 - - cytochrome P450, family 2, subfamily N, polypeptide 13 [Source:ZFIN;Acc:ZDB-GENE-041001-158]
91. zp2.5 ENSDARG00000086522 15 0.933 - - - - - - 0.933 - - zona pellucida glycoprotein 2, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-090306-1]
92. si:dkey-16p6.1_2 ENSDARG00000088245, ENSDARG00000089179, ENSDARG00000090033, ENSDARG00000090192, ENSDARG00000090734, ENSDARG00000091746, ENSDARG00000098189, ENSDARG00000098515, ENSDARG00000099262, ENSDARG00000100061, ENSDARG00000100164, ENSDARG00000101351, ENSDARG00000101689, ENSDARG00000101828, ENSDARG00000102212, ENSDARG00000104416, ENSDARG00000104897, ENSDARG00000105266, ENSDARG00000111518 1 0.933 - - - - - - 0.933 - - si:dkey-16p6.1 [Source:ZFIN;Acc:ZDB-GENE-081103-43]
93. CU104716.2 CU104716.2 10 0.933 - - - - - - 0.933 - -
94. si:ch1073-181h11.2 ENSDARG00000103883 24 0.933 - - - - - - 0.933 - - si:ch1073-181h11.2 [Source:ZFIN;Acc:ZDB-GENE-081031-58]
95. si:dkey-150h13.1 si:dkey-150h13.1 1 0.933 - - - - - - 0.933 - -
96. grtp1b ENSDARG00000030269 24 0.933 - - - - - - 0.933 - - growth hormone regulated TBC protein 1b [Source:ZFIN;Acc:ZDB-GENE-050417-346]
97. fbxo32 ENSDARG00000040277 93 0.933 - - - - - - 0.933 - - F-box protein 32 [Source:ZFIN;Acc:ZDB-GENE-040426-1040]
98. zgc:152938 ENSDARG00000102586 97 0.933 - - - - - - 0.933 - - zgc:152938 [Source:ZFIN;Acc:ZDB-GENE-061013-458]
99. si:dkey-148e22.3 si:dkey-148e22.3 4 0.933 - - - - - - 0.933 - -
100. CR762480.5 CR762480.5 1 0.933 - - - - - - 0.933 - -

There are 1155 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA