Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-152p11.8

Gene Name Gene ID Reads Annotation
si:ch211-152p11.8 46 si:ch211-152p11.8, transcript variant X2










Genes with expression patterns similar to si:ch211-152p11.8

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-152p11.8 46 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-152p11.8, transcript variant X2
2. ubxn1_1 ENSDARG00000090309 38 1.892 - 0.908 - - - - 0.984 - - UBX domain protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-792]
3. C23H1orf192 C23H1orf192 60 1.805 - - 0.805 - - 1.000 - - -
4. KCNK2 KCNK2 89 1.729 - - - - 0.842 - 0.887 - -
5. CT573263.1 ENSDARG00000112940 108 1.72 - - - - 0.862 - 0.858 - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:108184006]
6. si:dkey-11f4.16 ENSDARG00000099799 121 1.715 - 0.785 - - - - - - 0.930 si:dkey-11f4.16 [Source:ZFIN;Acc:ZDB-GENE-070912-357]
7. ppp2r3a ENSDARG00000077722 7 1.714 - - - - - - 0.933 - 0.781 protein phosphatase 2, regulatory subunit B'', alpha [Source:ZFIN;Acc:ZDB-GENE-070912-646]
8. gcnt3 ENSDARG00000060471 37 1.714 - - - - - 0.781 0.933 - - glucosaminyl (N-acetyl) transferase 3, mucin type [Source:ZFIN;Acc:ZDB-GENE-110411-253]
9. BX511257.1 BX511257.1 66 1.711 - 0.711 - - - 1.000 - - -
10. pxn pxn 10 1.681 - 0.748 - - - - 0.933 - -
11. lratb 3 1.681 - 0.748 - - - - 0.933 - - lecithin retinol acyltransferase b (phosphatidylcholine-retinol O-acyltransferase), transcript variant X2
12. EP400 ENSDARG00000100965 45 1.678 - - 0.745 - - - 0.933 - - E1A binding protein p400 [Source:ZFIN;Acc:ZDB-GENE-081104-186]
13. zgc:112966 ENSDARG00000095369, ENSDARG00000099057, ENSDARG00000101612 7 1.67 - 0.748 0.922 - - - - - - zgc:112966 [Source:ZFIN;Acc:ZDB-GENE-050320-137]
14. rdh14a ENSDARG00000039299 79 1.664 - - - - - 0.797 0.867 - - retinol dehydrogenase 14a [Source:ZFIN;Acc:ZDB-GENE-041010-124]
15. sod3b ENSDARG00000079183 39 1.662 - - - - - - 0.922 0.740 - superoxide dismutase 3, extracellular b [Source:ZFIN;Acc:ZDB-GENE-030131-8743]
16. disp2 ENSDARG00000042846 53 1.661 - 0.748 - - - - 0.913 - - dispatched homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030915-1]
17. mlycd ENSDARG00000104732, ENSDARG00000117073 5 1.659 - 0.748 - - - - 0.911 - - malonyl-CoA decarboxylase [Source:ZFIN;Acc:ZDB-GENE-070410-120]
18. aspdh ENSDARG00000038297 39 1.653 - - - - 0.850 - 0.803 - - aspartate dehydrogenase domain containing [Source:ZFIN;Acc:ZDB-GENE-040912-102]
19. usp20 ENSDARG00000027501, ENSDARG00000116822 211 1.651 - - - - 0.800 - 0.851 - - ubiquitin specific peptidase 20 [Source:ZFIN;Acc:ZDB-GENE-040426-1219]
20. si:ch211-117l17.4 ENSDARG00000103534 24 1.648 - - - - - 0.867 - - 0.781 si:ch211-117l17.4 [Source:ZFIN;Acc:ZDB-GENE-110913-102]
21. C24H16orf11 C24H16orf11 32 1.636 - 0.712 - - 0.924 - - - -
22. mtmr10 ENSDARG00000010601 37 1.619 - 0.706 - - 0.913 - - - - myotubularin related protein 10 [Source:ZFIN;Acc:ZDB-GENE-061103-52]
23. FNDC3A ENSDARG00000105503 11 1.618 - - - - - 0.867 - - 0.751 fibronectin type III domain containing 3A [Source:ZFIN;Acc:ZDB-GENE-030131-7015]
24. si:ch211-219a15.3 ENSDARG00000087659 12 1.615 - 0.748 - - - 0.867 - - - si:ch211-219a15.3 [Source:ZFIN;Acc:ZDB-GENE-060503-214]
25. si:dkeyp-25a3.1 si:dkeyp-25a3.1 4 1.606 - - - - - 0.825 - - 0.781
26. nt5e ENSDARG00000071017 18 1.598 - 0.785 0.813 - - - - - - 5'-nucleotidase, ecto (CD73) [Source:ZFIN;Acc:ZDB-GENE-040426-1261]
27. BX088691.1 BX088691.1 9 1.597 - 0.748 - - - - 0.849 - -
28. PLEKHA2 PLEKHA2 43 1.594 - - - - - 0.736 0.858 - -
29. poc5 ENSDARG00000059982 569 1.581 - 0.820 - - - 0.761 - - - POC5 centriolar protein homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-060526-135]
30. grnas ENSDARG00000091885 71 1.579 - - 0.734 - - - 0.845 - - granulin antisense [Source:ZFIN;Acc:ZDB-GENE-060104-1]
31. CR388046.3 ENSDARG00000105537 108 1.563 - - - - - - 0.793 0.770 -
32. si:ch211-181d7.1 ENSDARG00000088274, ENSDARG00000091847 18 1.554 - - - - - - 0.815 - 0.739 si:ch211-181d7.1 [Source:ZFIN;Acc:ZDB-GENE-121214-14]
33. ddr2a ENSDARG00000100693 236 1.552 - 0.827 - - 0.725 - - - - discoidin domain receptor tyrosine kinase 2a [Source:ZFIN;Acc:ZDB-GENE-090316-2]
34. rab11fip1a ENSDARG00000046124 69 1.549 - - - - - 0.766 0.783 - - RAB11 family interacting protein 1 (class I) a [Source:ZFIN;Acc:ZDB-GENE-051113-116]
35. palb2 ENSDARG00000076716 170 1.528 - - - - - 0.714 0.814 - - partner and localizer of BRCA2 [Source:ZFIN;Acc:ZDB-GENE-090313-43]
36. EPS8 78 1.523 - - - - - 0.791 0.732 - - epidermal growth factor receptor pathway substrate 8, transcript variant X14
37. cables2b ENSDARG00000017154 131 1.522 - - 0.785 - - - 0.737 - - Cdk5 and Abl enzyme substrate 2b [Source:ZFIN;Acc:ZDB-GENE-090313-249]
38. crispld1b ENSDARG00000013293 200 1.519 - 0.743 - - 0.776 - - - - cysteine-rich secretory protein LCCL domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1204]
39. si:ch211-165d12.4 ENSDARG00000079353 330 1.516 - - 0.739 - - - 0.777 - - si:ch211-165d12.4 [Source:ZFIN;Acc:ZDB-GENE-080303-7]
40. ntf7 ntf7 72 1.508 - - - - - 0.776 0.732 - -
41. C25H12orf5 C25H12orf5 65 1.506 - - - - - 0.781 0.725 - -
42. zgc:91999 ENSDARG00000105001 129 1.503 - 0.740 - - 0.763 - - - - zgc:91999 [Source:ZFIN;Acc:ZDB-GENE-040801-241]
43. ppp1r11 ENSDARG00000036063 587 1.489 - - - - 0.715 0.774 - - - protein phosphatase 1, regulatory (inhibitor) subunit 11 [Source:ZFIN;Acc:ZDB-GENE-050417-99]
44. tapt1b ENSDARG00000061143, ENSDARG00000109798, ENSDARG00000112241 482 1.484 - - - - 0.723 - 0.761 - - transmembrane anterior posterior transformation 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4025]
45. si:ch211-253p18.2 ENSDARG00000092770 21 1.469 - 0.748 - - - 0.721 - - - si:ch211-253p18.2 [Source:ZFIN;Acc:ZDB-GENE-041001-106]
46. FAM183B FAM183B 25 1.461 - - 0.760 0.701 - - - - -
47. si:dkey-165i8.5 si:dkey-165i8.5 21 1.458 - 0.748 - - - - 0.710 - -
48. NFATC4 ENSDARG00000054162 44 1 - - - - - - 1.000 - - nuclear factor of activated T cells 4 [Source:ZFIN;Acc:ZDB-GENE-070912-659]
49. si:ch73-60p2.1 si:ch73-60p2.1 21 1 - - - - - - 1.000 - -
50. mkks ENSDARG00000016139 70 1 - - - - - 1.000 - - - McKusick-Kaufman syndrome [Source:ZFIN;Acc:ZDB-GENE-040426-757]
51. si:ch211-63o20.7 ENSDARG00000042000 93 1 - - - - - - 1.000 - - si:ch211-63o20.7 [Source:ZFIN;Acc:ZDB-GENE-041001-194]
52. mctp1b ENSDARG00000060871 20 1 - - - - - - 1.000 - - multiple C2 domains, transmembrane 1b [Source:ZFIN;Acc:ZDB-GENE-090313-382]
53. CU856173.1 CU856173.1 26 1 - 1.000 - - - - - - -
54. si:ch211-22k7.1 si:ch211-22k7.1 30 1 - - - - - 1.000 - - -
55. tlr4ba ENSDARG00000019742, ENSDARG00000113084 20 1 - - - - - - 1.000 - - toll-like receptor 4b, duplicate a [Source:ZFIN;Acc:ZDB-GENE-040219-8]
56. dio2 ENSDARG00000094857 17 1 - - - - - - 1.000 - - iodothyronine deiodinase 2 [Source:ZFIN;Acc:ZDB-GENE-030327-4]
57. kcnip3a ENSDARG00000034229 63 1 - - - - - - 1.000 - - Kv channel interacting protein 3a, calsenilin [Source:ZFIN;Acc:ZDB-GENE-040426-1791]
58. CR854827.2 ENSDARG00000097227 15 1 - - - - - 1.000 - - -
59. osgin2 ENSDARG00000040302 45 0.988 - - - - - - 0.988 - - oxidative stress induced growth inhibitor family member 2 [Source:ZFIN;Acc:ZDB-GENE-081028-57]
60. si:ch211-237l4.6 ENSDARG00000056915 49 0.976 - - - - - - 0.976 - - si:ch211-237l4.6 [Source:ZFIN;Acc:ZDB-GENE-040724-42]
61. SLC37A3 176 0.963 - - - - - - 0.963 - - solute carrier family 37 member 3, transcript variant X4
62. CABZ01111953.1 ENSDARG00000099747 38 0.961 - - - - - - 0.961 - - oxysterol-binding protein-related protein 10-like [Source:NCBI gene;Acc:100334085]
63. traf3ip1 ENSDARG00000010300 69 0.96 - - - - - - 0.960 - - TNF receptor-associated factor 3 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1146]
64. ENSDARG00000092910 ENSDARG00000092910 44 0.96 - - - - - - 0.960 - -
65. kcnt1 ENSDARG00000079484 45 0.96 - - - - - - 0.960 - - potassium channel, subfamily T, member 1 [Source:ZFIN;Acc:ZDB-GENE-091231-1]
66. si:dkey-10p5.7 26 0.96 - - - - - - 0.960 - - si:dkey-10p5.7
67. WNK3 WNK3 36 0.96 - - - - - - 0.960 - -
68. bmp6 ENSDARG00000015686 211 0.96 - - - - - - 0.960 - - bone morphogenetic protein 6 [Source:ZFIN;Acc:ZDB-GENE-050306-42]
69. CCDC141 ENSDARG00000095675 94 0.954 - - - - - 0.954 - - - coiled-coil domain containing 141 [Source:ZFIN;Acc:ZDB-GENE-081104-472]
70. NUFIP1 ENSDARG00000101024 229 0.954 - - - - - - 0.954 - - nuclear fragile X mental retardation protein interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6203]
71. WSCD1 ENSDARG00000098113 35 0.948 - - 0.948 - - - - - - WSC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29060]
72. si:ch211-132g1.6 ENSDARG00000093102 13 0.942 - - - - - 0.942 - - - si:ch211-132g1.6 [Source:ZFIN;Acc:ZDB-GENE-091204-469]
73. drd4-rs ENSDARG00000001912 45 0.942 - - - - - - 0.942 - - dopamine receptor D4 related sequence [Source:ZFIN;Acc:ZDB-GENE-051113-172]
74. BX510934.1 ENSDARG00000087544 140 0.942 - - - - - - 0.942 - -
75. CU467982.1 CU467982.1 12 0.938 - - 0.938 - - - - - -
76. rabggta ENSDARG00000061024 332 0.934 - - - - - - 0.934 - - Rab geranylgeranyltransferase subunit alpha [Source:ZFIN;Acc:ZDB-GENE-060929-1042]
77. SIKE1 2 0.933 - - - - - - 0.933 - - suppressor of IKBKE 1, transcript variant X3
78. gabrr2b ENSDARG00000014057 9 0.933 - - - - - - 0.933 - - gamma-aminobutyric acid (GABA) A receptor, rho 2b [Source:ZFIN;Acc:ZDB-GENE-041014-174]
79. CECR6 25 0.933 - - - - - - 0.933 - - cat eye syndrome chromosome region, candidate 6
80. si:ch211-283l16.1 ENSDARG00000112586 131 0.933 - - - - - - 0.933 - - si:ch211-283l16.1 [Source:ZFIN;Acc:ZDB-GENE-110913-44]
81. PLEKHS1_2 PLEKHS1_2 21 0.933 - - - - - - 0.933 - -
82. CABZ01002626.1 CABZ01002626.1 29 0.933 - - - - - - 0.933 - -
83. si:dkey-28k24.2 ENSDARG00000095106, ENSDARG00000104787, ENSDARG00000110878, ENSDARG00000116574 1 0.933 - - - - - - 0.933 - - si:dkey-28k24.2 [Source:ZFIN;Acc:ZDB-GENE-121213-4]
84. si:dkey-58f10.11 ENSDARG00000094935 1 0.933 - - - - - - 0.933 - - si:dkey-58f10.11 [Source:ZFIN;Acc:ZDB-GENE-060526-313]
85. mmrn2a ENSDARG00000076135 37 0.933 - - - - - - 0.933 - - multimerin 2a [Source:ZFIN;Acc:ZDB-GENE-080424-3]
86. si:ch211-239f4.6 ENSDARG00000093347 2 0.933 - - - - - - 0.933 - - si:ch211-239f4.6 [Source:ZFIN;Acc:ZDB-GENE-061009-18]
87. SPDEF ENSDARG00000029930 60 0.933 - - - - - - 0.933 - - SAM pointed domain containing ETS transcription factor [Source:HGNC Symbol;Acc:HGNC:17257]
88. fscn1b ENSDARG00000037747, ENSDARG00000111370 75 0.933 - - - - - - 0.933 - - fascin actin-bundling protein 1b [Source:ZFIN;Acc:ZDB-GENE-120507-1]
89. CU929052.1 CU929052.1 642 0.933 - - - - - - 0.933 - -
90. slc5a1 ENSDARG00000013871 4 0.933 - - - - - - 0.933 - - solute carrier family 5 (sodium/glucose cotransporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1524]
91. zgc:171551 ENSDARG00000073708, ENSDARG00000111940 24 0.933 - - - - - - 0.933 - - zgc:171551 [Source:ZFIN;Acc:ZDB-GENE-080220-8]
92. dctn1a ENSDARG00000019743 45 0.933 - - - - - - 0.933 - - dynactin 1a [Source:ZFIN;Acc:ZDB-GENE-070117-2205]
93. sh2d1aa ENSDARG00000095348 4 0.933 - - - - - - 0.933 - - SH2 domain containing 1A duplicate a [Source:ZFIN;Acc:ZDB-GENE-060526-212]
94. TMEM138 ENSDARG00000090543 105 0.933 - - - - - - 0.933 - - transmembrane protein 138 [Source:ZFIN;Acc:ZDB-GENE-120912-1]
95. si:ch211-122l24.5 si:ch211-122l24.5 1 0.933 - - - - - - 0.933 - -
96. nitr3a_1 ENSDARG00000110676 44 0.933 - - - - - - 0.933 - - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
97. CR762480.2 ENSDARG00000102728 1 0.933 - - - - - - 0.933 - -
98. si:ch211-226h8.4 ENSDARG00000086221, ENSDARG00000113147 38 0.933 - - - - - - 0.933 - - si:ch211-226h8.4 [Source:ZFIN;Acc:ZDB-GENE-050208-376]
99. BX537305.1 ENSDARG00000113834 10 0.933 - - - - - - 0.933 - -
100. si:ch211-12e1.5 si:ch211-12e1.5 14 0.933 - - - - - - 0.933 - -

There are 1155 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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