Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-152c2.3

Gene Name Gene ID Reads Annotation
si:ch211-152c2.3 ENSDARG00000045898 3448 si:ch211-152c2.3 [Source:ZFIN;Acc:ZDB-GENE-030131-9914]










Genes with expression patterns similar to si:ch211-152c2.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-152c2.3 ENSDARG00000045898 3448 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-152c2.3 [Source:ZFIN;Acc:ZDB-GENE-030131-9914]
2. cryba2a ENSDARG00000030349 1342 2.689 - - 0.917 0.879 0.893 - - - - crystallin, beta A2a [Source:ZFIN;Acc:ZDB-GENE-040625-8]
3. crygmx ENSDARG00000053862 482 2.664 - - 0.923 0.877 0.864 - - - - crystallin, gamma MX [Source:ZFIN;Acc:ZDB-GENE-030131-7732]
4. lim2.3 ENSDARG00000037402 302 2.66 - - 0.911 0.863 0.886 - - - - lens intrinsic membrane protein 2.3 [Source:ZFIN;Acc:ZDB-GENE-040718-327]
5. lim2.4 ENSDARG00000015445 791 2.655 - - 0.930 0.854 0.871 - - - - lens intrinsic membrane protein 2.4 [Source:ZFIN;Acc:ZDB-GENE-040718-104]
6. lim2.1 ENSDARG00000068974, ENSDARG00000114525 233 2.623 - - 0.904 0.848 0.871 - - - - lens intrinsic membrane protein 2.1 [Source:ZFIN;Acc:ZDB-GENE-050522-398]
7. mipa ENSDARG00000037285, ENSDARG00000116133 507 2.62 - - 0.907 0.878 0.835 - - - - major intrinsic protein of lens fiber a [Source:ZFIN;Acc:ZDB-GENE-040801-41]
8. crybb1 ENSDARG00000068507 2255 2.61 - - 0.937 0.786 0.887 - - - - crystallin, beta B1 [Source:ZFIN;Acc:ZDB-GENE-010813-1]
9. cx44.1 cx44.1 799 2.605 - - 0.874 0.875 0.856 - - - -
10. crygm2d10 ENSDARG00000087765 358 2.572 - - 0.900 0.807 0.865 - - - - crystallin, gamma M2d10 [Source:ZFIN;Acc:ZDB-GENE-071004-96]
11. cryba1l1 ENSDARG00000032929 1868 2.567 - - 0.937 0.758 0.872 - - - - crystallin, beta A1, like 1 [Source:ZFIN;Acc:ZDB-GENE-050417-249]
12. prox2 ENSDARG00000041952, ENSDARG00000117137 112 2.567 - - 0.905 0.875 0.787 - - - - prospero homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-081003-3]
13. si:ch211-145g9.7 32 2.56 - - 0.906 0.781 0.873 - - - - si:ch211-145g9.7, transcript variant X1
14. cx23 ENSDARG00000054150 115 2.559 - - 0.872 0.873 0.814 - - - - connexin 23 [Source:ZFIN;Acc:ZDB-GENE-050320-121]
15. crygn2 ENSDARG00000030411 2551 2.534 - - 0.930 0.756 0.848 - - - - crystallin, gamma N2 [Source:ZFIN;Acc:ZDB-GENE-040801-16]
16. cryba2b ENSDARG00000041925 4329 2.533 - - 0.894 0.789 0.850 - - - - crystallin, beta A2b [Source:ZFIN;Acc:ZDB-GENE-040718-324]
17. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 2.501 - - - - - 0.824 0.901 0.776 - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
18. nexn ENSDARG00000057317 10972 2.487 0.721 - - - - 0.832 0.934 - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
19. zgc:110053 zgc:110053 69 2.483 - - 0.920 0.823 0.740 - - - -
20. STIM2 STIM2 644 2.483 - 0.858 - - - 0.760 0.865 - -
21. tgm2a ENSDARG00000070157 4516 2.476 0.736 - - - - 0.805 0.935 - - transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
22. klhl40a ENSDARG00000039052 2537 2.471 0.750 - - - - 0.799 0.922 - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
23. fabp11b ENSDARG00000002311 354 2.47 - - 0.746 0.813 0.911 - - - - fatty acid binding protein 11b [Source:ZFIN;Acc:ZDB-GENE-050522-391]
24. crygm2d13 ENSDARG00000057460 1093 2.461 - - 0.899 0.816 0.746 - - - - crystallin, gamma M2d13 [Source:ZFIN;Acc:ZDB-GENE-040718-105]
25. si:ch211-212n6.16 si:ch211-212n6.16 314 2.455 - - 0.895 0.789 0.771 - - - -
26. mipb ENSDARG00000013963 753 2.447 - - 0.874 0.836 0.737 - - - - major intrinsic protein of lens fiber b [Source:ZFIN;Acc:ZDB-GENE-050706-86]
27. CU929052.1 CU929052.1 642 2.447 - - 0.915 0.749 0.783 - - - -
28. cps1 ENSDARG00000020028 67 2.444 - - 0.748 0.829 0.867 - - - - carbamoyl-phosphate synthase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-081105-17]
29. stac3 ENSDARG00000098883 1765 2.441 0.752 - - - - 0.831 0.858 - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
30. limch1a ENSDARG00000074275 2981 2.435 0.727 - - - - 0.803 0.905 - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
31. cap2 ENSDARG00000104478 3266 2.424 0.770 - - - - 0.774 0.880 - - CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
32. chrna1 ENSDARG00000009021 2931 2.418 0.732 - - - - 0.757 0.929 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
33. PTPLA PTPLA 4044 2.417 0.725 - - - - 0.757 0.935 - -
34. zgc:165347 zgc:165347 1358 2.414 - - 0.864 0.758 0.792 - - - -
35. capn3a ENSDARG00000041864 89 2.404 - - 0.838 0.841 0.725 - - - - calpain 3a, (p94) [Source:ZFIN;Acc:ZDB-GENE-040912-97]
36. crygm2d12 ENSDARG00000069801, ENSDARG00000113681 394 2.393 - - 0.893 0.783 0.717 - - - - crystallin, gamma M2d12 [Source:ZFIN;Acc:ZDB-GENE-070822-19]
37. ank2b ENSDARG00000043313 3065 2.373 0.764 - - - - 0.792 0.817 - - ankyrin 2b, neuronal [Source:ZFIN;Acc:ZDB-GENE-041010-165]
38. TENC1 TENC1 1729 2.367 0.774 - - - - 0.728 0.865 - -
39. CABZ01074435.1 CABZ01074435.1 4551 2.365 0.704 - - - - 0.769 0.892 - -
40. tspan7b ENSDARG00000008407 5740 2.337 0.762 - - - - 0.762 0.813 - - tetraspanin 7b [Source:ZFIN;Acc:ZDB-GENE-040927-5]
41. tmem41ab ENSDARG00000026771, ENSDARG00000114061, ENSDARG00000116237 641 2.332 0.719 - - - - 0.752 0.861 - - transmembrane protein 41ab [Source:ZFIN;Acc:ZDB-GENE-040426-2050]
42. zgc:165347_1 zgc:165347_1 69 2.318 - - 0.779 0.811 0.728 - - - -
43. crygm2d1 ENSDARG00000087324 258 2.308 - - 0.750 0.830 0.728 - - - - crystallin, gamma M2d1 [Source:ZFIN;Acc:ZDB-GENE-050522-395]
44. zgc:162402 zgc:162402 298 2.293 - - 0.741 0.792 0.760 - - - -
45. crygm2d4 ENSDARG00000087164, ENSDARG00000115295 138 2.276 - - 0.791 0.767 0.718 - - - - crystallin, gamma M2d4 [Source:ZFIN;Acc:ZDB-GENE-060918-3]
46. pfdn5 ENSDARG00000035043, ENSDARG00000109218, ENSDARG00000110370, ENSDARG00000113603 7566 2.253 0.726 - - - - 0.826 0.701 - - prefoldin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6858]
47. rbm24b ENSDARG00000031809, ENSDARG00000110167 2404 1.891 - - - - - - 0.898 - 0.993 RNA binding motif protein 24b [Source:ZFIN;Acc:ZDB-GENE-060312-43]
48. ube2a ENSDARG00000098466 12765 1.828 - - - - - - 0.840 - 0.988 ubiquitin-conjugating enzyme E2A (RAD6 homolog) [Source:ZFIN;Acc:ZDB-GENE-030616-72]
49. NRAP ENSDARG00000009341 3565 1.827 - - - - - 0.882 0.945 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
50. smpx ENSDARG00000045302 2175 1.814 - - - - - 0.847 0.967 - - small muscle protein X-linked [Source:ZFIN;Acc:ZDB-GENE-040704-24]
51. ryr3 ENSDARG00000071331 6795 1.795 - - - - - 0.848 0.947 - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
52. crybb1l2 ENSDARG00000016793 723 1.789 - - 0.930 - 0.859 - - - - crystallin, beta B1, like 2 [Source:ZFIN;Acc:ZDB-GENE-070822-18]
53. klhl41b ENSDARG00000006757 10762 1.789 - - - - - 0.841 0.948 - - kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
54. crip2 ENSDARG00000070670 4844 1.786 - - - - - 0.883 0.903 - - cysteine-rich protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2889]
55. tgfbi ENSDARG00000071586 17779 1.781 - - - - - 0.890 0.891 - - transforming growth factor, beta-induced [Source:ZFIN;Acc:ZDB-GENE-030131-73]
56. smtnl1 ENSDARG00000041257 7410 1.78 - - - - - 0.838 0.942 - - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
57. myom1a ENSDARG00000061249 10230 1.779 - - - - - 0.835 0.944 - - myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
58. sptb ENSDARG00000030490 7128 1.769 - - - - - 0.828 0.941 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
59. pfkmb ENSDARG00000060797, ENSDARG00000109412, ENSDARG00000109653, ENSDARG00000115422 3323 1.769 - - - - - 0.818 0.951 - - phosphofructokinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-081114-1]
60. tmem182 tmem182 12589 1.768 - - - - - 0.829 0.939 - -
61. crybb1l1 ENSDARG00000007576 1020 1.761 - - 0.903 - 0.858 - - - - crystallin, beta B1, like 1 [Source:ZFIN;Acc:ZDB-GENE-100112-3]
62. lims2 ENSDARG00000014976 1248 1.751 - - - - - 0.826 0.925 - - LIM and senescent cell antigen-like domains 2 [Source:ZFIN;Acc:ZDB-GENE-050522-56]
63. CR450814.3 CR450814.3 608 1.749 - - - - - 0.854 0.895 - -
64. fxr1 ENSDARG00000022968 2831 1.748 - - - - - 0.832 0.916 - - fragile X mental retardation, autosomal homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5431]
65. myhc4 ENSDARG00000035438 1322 1.748 - - - - - 0.773 0.975 - - myosin heavy chain 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6206]
66. ppapdc3 ppapdc3 4924 1.744 - - - - - 0.820 0.924 - -
67. BX323459.1 ENSDARG00000109508 1476 1.741 - - - - - 0.771 0.970 - -
68. flncb ENSDARG00000018820 5595 1.739 - - - - - 0.839 0.900 - - filamin C, gamma b (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-041008-175]
69. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 1.736 - - - - - 0.830 0.906 - - fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
70. txlnbb ENSDARG00000076241 6396 1.73 - - - - - 0.842 0.888 - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
71. zgc:92518 ENSDARG00000016343 3837 1.723 - - - - - 0.791 0.932 - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
72. trdn ENSDARG00000041779 4283 1.721 - - - - - 0.765 0.956 - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
73. dhrs7c dhrs7c 1173 1.721 - - - - - 0.795 0.926 - -
74. zgc:158296 ENSDARG00000070923 3935 1.719 - - - - - 0.831 0.888 - - zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
75. jph1a ENSDARG00000058603 2852 1.718 - - - - - 0.812 0.906 - - junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
76. ablim2 ENSDARG00000055223 1934 1.717 - - - - - 0.839 0.878 - - actin binding LIM protein family, member 2 [Source:ZFIN;Acc:ZDB-GENE-100316-5]
77. anxa6 ENSDARG00000013335 3588 1.717 - - - - - 0.818 0.899 - - annexin A6 [Source:ZFIN;Acc:ZDB-GENE-030707-3]
78. phex ENSDARG00000062363 1413 1.716 - - - - - 0.783 0.933 - - phosphate regulating endopeptidase homolog, X-linked [Source:ZFIN;Acc:ZDB-GENE-030103-2]
79. cdnf ENSDARG00000075501, ENSDARG00000111042, ENSDARG00000112793 647 1.716 - - - - - 0.836 0.880 - - cerebral dopamine neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-070410-37]
80. fbp2 ENSDARG00000012366 1042 1.715 - - - - - 0.831 0.884 - - fructose-1,6-bisphosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-040822-23]
81. barhl2 ENSDARG00000104361, ENSDARG00000114681, ENSDARG00000115723 2000 1.714 - - 0.860 - 0.854 - - - - BarH-like homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-050913-153]
82. PTGES3L PTGES3L 4801 1.714 - - - - - 0.862 0.852 - -
83. smyd1a ENSDARG00000009280 1503 1.711 - - - - - 0.802 0.909 - - SET and MYND domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9825]
84. nrl ENSDARG00000100466 41 1.709 - - 0.876 - 0.833 - - - - neural retina leucine zipper [Source:ZFIN;Acc:ZDB-GENE-050729-1]
85. ptch2 ENSDARG00000055026 980 1.708 - - - - - 0.809 0.899 - - patched 2 [Source:ZFIN;Acc:ZDB-GENE-980526-44]
86. cyp1d1 ENSDARG00000035569 628 1.705 - - - - - 0.822 0.883 - - cytochrome P450, family 1, subfamily D, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-041114-179]
87. si:ch211-274p24.3 si:ch211-274p24.3 72 1.701 - - 0.827 - 0.874 - - - -
88. slc16a3 ENSDARG00000045051 818 1.697 - 0.873 - - - - 0.824 - - solute carrier family 16 (monocarboxylate transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5487]
89. zgc:86723 zgc:86723 299 1.693 - - 0.916 0.777 - - - - -
90. hdac9b ENSDARG00000056642 1148 1.692 0.806 - - - - - 0.886 - - histone deacetylase 9b [Source:ZFIN;Acc:ZDB-GENE-040109-7]
91. jph2 ENSDARG00000028625 6706 1.688 - - - - - 0.750 0.938 - - junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
92. ENDOD1_5 ENDOD1_5 8723 1.688 0.709 - - - - - - - 0.979
93. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 1.688 - - - - - 0.733 0.955 - - LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
94. cthrc1a ENSDARG00000087198 1001 1.687 - - - - - 0.791 0.896 - - collagen triple helix repeat containing 1a [Source:ZFIN;Acc:ZDB-GENE-040808-22]
95. myod1 ENSDARG00000030110 6019 1.684 - - - - - 0.774 0.910 - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
96. pi15a ENSDARG00000045378 2361 1.684 - - - - - 0.808 0.876 - - peptidase inhibitor 15a [Source:ZFIN;Acc:ZDB-GENE-040724-135]
97. sspn ENSDARG00000041747, ENSDARG00000114109, ENSDARG00000114643 1228 1.682 - - - - - 0.836 0.846 - - sarcospan (Kras oncogene-associated gene) [Source:ZFIN;Acc:ZDB-GENE-051127-43]
98. vwde ENSDARG00000103443 5758 1.681 - - - - - 0.771 0.910 - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
99. gspt1 ENSDARG00000031048, ENSDARG00000109388 2735 1.679 - - - - - 0.846 0.833 - - G1 to S phase transition 1 [Source:ZFIN;Acc:ZDB-GENE-040822-36]
100. atp1b3b ENSDARG00000042837 5163 1.678 - - - - - 0.771 0.907 - - ATPase Na+/K+ transporting subunit beta 3b [Source:ZFIN;Acc:ZDB-GENE-001127-1]

There are 1388 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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