Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-150o23.2

Gene Name Gene ID Reads Annotation
si:ch211-150o23.2 ENSDARG00000092746 788 si:ch211-150o23.2 [Source:ZFIN;Acc:ZDB-GENE-060503-386]










Genes with expression patterns similar to si:ch211-150o23.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-150o23.2 ENSDARG00000092746 788 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-150o23.2 [Source:ZFIN;Acc:ZDB-GENE-060503-386]
2. atl3 ENSDARG00000004270 2806 1.895 - - - - 0.972 0.923 - - - atlastin 3 [Source:ZFIN;Acc:ZDB-GENE-041010-109]
3. casc5 1487 1.893 - - - - 0.981 0.912 - - - cancer susceptibility candidate 5, transcript variant X3
4. psmb6 ENSDARG00000002240 8015 1.865 - - - - 0.969 0.896 - - - proteasome subunit beta 6 [Source:ZFIN;Acc:ZDB-GENE-990415-216]
5. smurf1 ENSDARG00000016086 878 1.844 - - - - 0.990 - - 0.854 - SMAD specific E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2744]
6. csnk1g2a ENSDARG00000005458 2917 1.83 - - - - 0.966 0.864 - - - casein kinase 1, gamma 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6445]
7. dbr1 ENSDARG00000056923, ENSDARG00000116603 2196 1.767 - - - - 0.990 0.777 - - - debranching RNA lariats 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2466]
8. cyp2aa4 ENSDARG00000098803 1762 1.757 - - - - 0.976 - 0.781 - - cytochrome P450, family 2, subfamily AA, polypeptide 4 [Source:ZFIN;Acc:ZDB-GENE-040625-72]
9. tmem50a ENSDARG00000015757 3244 1.753 - - - - 0.973 0.780 - - - transmembrane protein 50A [Source:ZFIN;Acc:ZDB-GENE-040426-2937]
10. lum ENSDARG00000045580 5395 1.723 - - - - 0.978 - 0.745 - - lumican [Source:ZFIN;Acc:ZDB-GENE-040625-24]
11. CR759791.3 CR759791.3 134 1.714 - - - - - 0.936 0.778 - -
12. cbfa2t2 ENSDARG00000074337 4323 1.712 - - - - 0.887 0.825 - - - core-binding factor, runt domain, alpha subunit 2; translocated to, 2 [Source:ZFIN;Acc:ZDB-GENE-070209-1]
13. lig4 ENSDARG00000060620 369 1.7 - 0.707 - - 0.993 - - - - ligase IV, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-070820-10]
14. CU633999.1 ENSDARG00000098197 2880 1.695 - - - - 0.982 0.713 - - -
15. SRGAP3 ENSDARG00000060309 5353 1.695 - - - - 0.949 0.746 - - - SLIT-ROBO Rho GTPase activating protein 3 [Source:ZFIN;Acc:ZDB-GENE-060524-4]
16. zgc:110239 ENSDARG00000077664 7015 1.693 - - - - 0.985 - 0.708 - - zgc:110239 [Source:ZFIN;Acc:ZDB-GENE-050417-107]
17. rhogd ENSDARG00000030608, ENSDARG00000112157 599 1.684 0.721 - - - - 0.963 - - - ras homolog gene family, member Gd [Source:ZFIN;Acc:ZDB-GENE-040426-1504]
18. mrps15 ENSDARG00000109289 3258 1.683 - 0.717 - - 0.966 - - - - mitochondrial ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-040718-188]
19. arl5c ENSDARG00000035719 1257 1.681 - - - - - 0.795 0.886 - - ADP-ribosylation factor-like 5C [Source:ZFIN;Acc:ZDB-GENE-040426-1866]
20. actr2a ENSDARG00000052438 5838 1.676 - - - - - 0.955 0.721 - - ARP2 actin related protein 2a homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2894]
21. arhgap29b ENSDARG00000017748 812 1.673 - - - - - 0.888 - 0.785 - Rho GTPase activating protein 29b [Source:ZFIN;Acc:ZDB-GENE-031010-44]
22. zgc:101569 ENSDARG00000038876 1525 1.651 - - - - - 0.929 0.722 - - zgc:101569 [Source:ZFIN;Acc:ZDB-GENE-041010-72]
23. im:7154842 im:7154842 434 1.648 - 0.711 - - - 0.937 - - -
24. tns1 tns1 5891 1.629 - - - - 0.862 0.767 - - -
25. s100v1 ENSDARG00000070427 6633 1.627 - - - - - 0.923 0.704 - - S100 calcium binding protein V1 [Source:ZFIN;Acc:ZDB-GENE-080407-1]
26. CCDC50 ENSDARG00000105136 1695 1.612 - 0.791 - - - 0.821 - - - coiled-coil domain containing 50 [Source:ZFIN;Acc:ZDB-GENE-150115-1]
27. zgc:175214 ENSDARG00000022891 1013 1.591 - 0.705 - - - 0.886 - - - zgc:175214 [Source:ZFIN;Acc:ZDB-GENE-080303-32]
28. gipc2 ENSDARG00000009488 672 1.568 - - - - - 0.825 0.743 - - GIPC PDZ domain containing family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-921]
29. rnf165b ENSDARG00000078817 432 1.565 - 0.811 - - - 0.754 - - - ring finger protein 165b [Source:ZFIN;Acc:ZDB-GENE-081104-369]
30. atg9a ENSDARG00000044551 179 1.553 - 0.704 - - - 0.849 - - - ATG9 autophagy related 9 homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-070209-65]
31. c1galt1c1 ENSDARG00000036335 1623 1.548 - - - - - 0.832 0.716 - - C1GALT1-specific chaperone 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2772]
32. cyth1a ENSDARG00000005159, ENSDARG00000076742 2796 1.53 0.710 - - - - 0.820 - - - cytohesin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-657]
33. chtopa ENSDARG00000057234 3287 1.528 - 0.700 - - - 0.828 - - - chromatin target of PRMT1a [Source:ZFIN;Acc:ZDB-GENE-030131-210]
34. PPP4R1L ENSDARG00000099379 2132 1.451 - - - - - 0.712 0.739 - - protein phosphatase 4, regulatory subunit 1-like [Source:ZFIN;Acc:ZDB-GENE-121022-4]
35. ccr10 ENSDARG00000040643 255 0.994 - - - - 0.994 - - - - chemokine (C-C motif) receptor 10 [Source:ZFIN;Acc:ZDB-GENE-040718-424]
36. lrch2 ENSDARG00000075580, ENSDARG00000116418 255 0.994 - - - - 0.994 - - - - leucine-rich repeats and calponin homology (CH) domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-080114-1]
37. ago4 ENSDARG00000100854 496 0.994 - - - - 0.994 - - - - argonaute RISC catalytic component 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5357]
38. tab1 ENSDARG00000036613 445 0.994 - - - - 0.994 - - - - TGF-beta activated kinase 1/MAP3K7 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060628-1]
39. fam193b ENSDARG00000102831 442 0.994 - - - - 0.994 - - - - family with sequence similarity 193, member B [Source:ZFIN;Acc:ZDB-GENE-111102-1]
40. pfkpb ENSDARG00000012801 223 0.994 - - - - 0.994 - - - - phosphofructokinase, platelet b [Source:ZFIN;Acc:ZDB-GENE-070912-634]
41. CR759921.2 CR759921.2 583 0.994 - - - - 0.994 - - - -
42. ccdc28b ENSDARG00000011222 528 0.993 - - - - 0.993 - - - - coiled-coil domain containing 28B [Source:ZFIN;Acc:ZDB-GENE-060208-3]
43. slc2a15b ENSDARG00000053269 899 0.993 - - - - 0.993 - - - - solute carrier family 2 (facilitated glucose transporter), member 15b [Source:ZFIN;Acc:ZDB-GENE-050508-1]
44. TUSC5_1 TUSC5_1 320 0.993 - - - - 0.993 - - - -
45. FOXL2 239 0.993 - - - - 0.993 - - - - forkhead box L2, transcript variant X1
46. nefma ENSDARG00000021351 790 0.993 - - - - 0.993 - - - - neurofilament, medium polypeptide a [Source:ZFIN;Acc:ZDB-GENE-050522-205]
47. spag7 ENSDARG00000011555 3224 0.993 - - - - 0.993 - - - - sperm associated antigen 7 [Source:ZFIN;Acc:ZDB-GENE-040426-1632]
48. si:dkey-20j1.4 si:dkey-20j1.4 406 0.993 - - - - 0.993 - - - -
49. cuedc2 ENSDARG00000039365 484 0.993 - - - - 0.993 - - - - CUE domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6283]
50. myl2b ENSDARG00000053424 226 0.993 - - - - 0.993 - - - - myosin, light chain 2b, regulatory, cardiac, slow [Source:ZFIN;Acc:ZDB-GENE-060331-137]
51. ercc6 ENSDARG00000075612 1175 0.992 - - - - 0.992 - - - - excision repair cross-complementation group 6 [Source:ZFIN;Acc:ZDB-GENE-070228-1]
52. atxn7l3 ENSDARG00000029331 531 0.992 - - - - 0.992 - - - - ataxin 7-like 3 [Source:ZFIN;Acc:ZDB-GENE-030616-253]
53. tmem88a ENSDARG00000056920 536 0.992 - - - - 0.992 - - - - transmembrane protein 88 a [Source:ZFIN;Acc:ZDB-GENE-040426-1808]
54. dopey1 438 0.992 - - - - 0.992 - - - - dopey family member 1, transcript variant X4
55. gorab ENSDARG00000042031 483 0.992 - - - - 0.992 - - - - golgin, rab6-interacting [Source:ZFIN;Acc:ZDB-GENE-040426-1384]
56. exoc3l4 ENSDARG00000058180 923 0.992 - - - - 0.992 - - - - exocyst complex component 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-081028-71]
57. med13b ENSDARG00000003910 1143 0.992 - - - - 0.992 - - - - mediator complex subunit 13b [Source:ZFIN;Acc:ZDB-GENE-030131-3529]
58. brd9 ENSDARG00000017143 936 0.991 - - - - 0.991 - - - - bromodomain containing 9 [Source:ZFIN;Acc:ZDB-GENE-060502-1]
59. BX005008.2 BX005008.2 708 0.991 - - - - 0.991 - - - -
60. eng1b eng1b 2544 0.991 - - - - 0.991 - - - -
61. aldh16a1 ENSDARG00000037935 617 0.991 - - - - 0.991 - - - - aldehyde dehydrogenase 16 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-070112-2062]
62. pvalb6 ENSDARG00000009311, ENSDARG00000113947 248 0.991 - - - - 0.991 - - - - parvalbumin 6 [Source:ZFIN;Acc:ZDB-GENE-040912-95]
63. TRAPPC10 ENSDARG00000098118 954 0.991 - - - - 0.991 - - - - trafficking protein particle complex 10 [Source:ZFIN;Acc:ZDB-GENE-131115-1]
64. bmi1a ENSDARG00000006010 2061 0.991 - - - - 0.991 - - - - bmi1 polycomb ring finger oncogene 1a [Source:ZFIN;Acc:ZDB-GENE-030131-224]
65. lgi1a ENSDARG00000020493 1218 0.991 - - - - 0.991 - - - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
66. fut8 fut8 652 0.99 - - - - 0.990 - - - -
67. bloc1s3 ENSDARG00000068828 502 0.99 - - - - 0.990 - - - - biogenesis of lysosomal organelles complex-1, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050913-10]
68. zswim8 ENSDARG00000069397, ENSDARG00000112914 2378 0.99 - - - - 0.990 - - - - zinc finger, SWIM-type containing 8 [Source:ZFIN;Acc:ZDB-GENE-050320-59]
69. larp7 ENSDARG00000017315 1194 0.99 - - - - 0.990 - - - - La ribonucleoprotein domain family, member 7 [Source:ZFIN;Acc:ZDB-GENE-030131-6896]
70. aspg ENSDARG00000052942 1406 0.99 - - - - 0.990 - - - - asparaginase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-070820-14]
71. pan3 ENSDARG00000031637, ENSDARG00000111004 613 0.99 - - - - 0.990 - - - - poly(A) specific ribonuclease subunit PAN3 [Source:ZFIN;Acc:ZDB-GENE-070928-13]
72. pip5k1bb ENSDARG00000006508 2812 0.989 - - - - 0.989 - - - - phosphatidylinositol-4-phosphate 5-kinase, type I, beta b [Source:ZFIN;Acc:ZDB-GENE-040912-141]
73. pdpk1b ENSDARG00000018285 957 0.989 - - - - 0.989 - - - - 3-phosphoinositide dependent protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1820]
74. wdr24 ENSDARG00000025507 505 0.989 - - - - 0.989 - - - - WD repeat domain 24 [Source:ZFIN;Acc:ZDB-GENE-040426-2012]
75. clu ENSDARG00000010434 498 0.989 - - - - 0.989 - - - - clusterin [Source:ZFIN;Acc:ZDB-GENE-040426-1774]
76. katnbl1 ENSDARG00000042522 1086 0.989 - - - - 0.989 - - - - katanin p80 subunit B-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4155]
77. toporsb ENSDARG00000105028 1898 0.989 - - - - 0.989 - - - - topoisomerase I binding, arginine/serine-rich b [Source:ZFIN;Acc:ZDB-GENE-110728-3]
78. st8sia6 ENSDARG00000021195 2244 0.989 - - - - 0.989 - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 [Source:ZFIN;Acc:ZDB-GENE-060322-9]
79. cenpi ENSDARG00000052565 482 0.989 - - - - 0.989 - - - - centromere protein I [Source:ZFIN;Acc:ZDB-GENE-060810-127]
80. usp16 ENSDARG00000060633 684 0.989 - - - - 0.989 - - - - ubiquitin specific peptidase 16 [Source:ZFIN;Acc:ZDB-GENE-030131-4153]
81. sox1a ENSDARG00000069866, ENSDARG00000110682, ENSDARG00000114571 576 0.988 - - - - 0.988 - - - - SRY (sex determining region Y)-box 1a [Source:ZFIN;Acc:ZDB-GENE-040718-186]
82. plrg1 ENSDARG00000037283, ENSDARG00000110921 1552 0.988 - - - - 0.988 - - - - pleiotropic regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2787]
83. FBXO33 ENSDARG00000075400 1164 0.988 - - - - 0.988 - - - - F-box protein 33 [Source:ZFIN;Acc:ZDB-GENE-100618-2]
84. msh2 ENSDARG00000018022, ENSDARG00000115185 1301 0.988 - - - - 0.988 - - - - mutS homolog 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-040426-2932]
85. msxe msxe 362 0.988 - - - - 0.988 - - - -
86. mrrf ENSDARG00000034174, ENSDARG00000115754 791 0.988 - - - - 0.988 - - - - mitochondrial ribosome recycling factor [Source:ZFIN;Acc:ZDB-GENE-040704-12]
87. prdm16 prdm16 1346 0.988 - - - - 0.988 - - - -
88. mnat1 ENSDARG00000002077 287 0.988 - - - - 0.988 - - - - MNAT CDK-activating kinase assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-041010-203]
89. MANBAL ENSDARG00000059853 636 0.987 - - - - 0.987 - - - - mannosidase beta like [Source:ZFIN;Acc:ZDB-GENE-161222-1]
90. comtb ENSDARG00000025679, ENSDARG00000111678 1692 0.987 - - - - 0.987 - - - - catechol-O-methyltransferase b [Source:ZFIN;Acc:ZDB-GENE-040724-164]
91. sin3b ENSDARG00000062472 2025 0.987 - - - - 0.987 - - - - SIN3 transcription regulator family member B [Source:ZFIN;Acc:ZDB-GENE-030131-8264]
92. larp4b ENSDARG00000062146 1601 0.987 - - - - 0.987 - - - - La ribonucleoprotein domain family, member 4B [Source:ZFIN;Acc:ZDB-GENE-061027-39]
93. GRAMD4 GRAMD4 1967 0.987 - - - - 0.987 - - - -
94. rca2.1 ENSDARG00000056075 3410 0.987 - - - - 0.987 - - - - regulator of complement activation group 2 gene 1 [Source:ZFIN;Acc:ZDB-GENE-050320-60]
95. cables2a ENSDARG00000076964 1330 0.987 - - - - 0.987 - - - - Cdk5 and Abl enzyme substrate 2a [Source:ZFIN;Acc:ZDB-GENE-091118-58]
96. ypel5 ENSDARG00000088929 1011 0.987 - - - - 0.987 - - - - yippee-like 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1220]
97. hvcn1 ENSDARG00000040338 571 0.987 - - - - 0.987 - - - - hydrogen voltage-gated channel 1 [Source:ZFIN;Acc:ZDB-GENE-040718-36]
98. aatf ENSDARG00000025467, ENSDARG00000109548 796 0.986 - - - - 0.986 - - - - apoptosis antagonizing transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-9654]
99. hey2 ENSDARG00000013441 540 0.986 - - - - 0.986 - - - - hes-related family bHLH transcription factor with YRPW motif 2 [Source:ZFIN;Acc:ZDB-GENE-000526-1]
100. odz4 odz4 822 0.985 - - - - 0.985 - - - -

There are 1208 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA