Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-14g4.4

Gene Name Gene ID Reads Annotation
si:ch211-14g4.4 si:ch211-14g4.4 6










Genes with expression patterns similar to si:ch211-14g4.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-14g4.4 si:ch211-14g4.4 6 2 1.000 - - - 1.000 - - - -
2. flh flh 47 1.994 1.000 - - - 0.994 - - - -
3. si:dkey-200l5.4 ENSDARG00000095294 13 1.961 1.000 - - - 0.961 - - - - si:dkey-200l5.4 [Source:ZFIN;Acc:ZDB-GENE-091204-393]
4. wfikkn1 ENSDARG00000101364 11 1.884 1.000 - - - 0.884 - - - - WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2465]
5. si:dkey-17e6.2 si:dkey-17e6.2 72 1 1.000 - - - - - - - -
6. CLDN20 26 1 1.000 - - - - - - - - claudin 20, transcript variant X2
7. C13H10orf53 C13H10orf53 3 1 1.000 - - - - - - - -
8. ZNF337_9 ZNF337_9 18 1 1.000 - - - - - - - -
9. CU570691.1 ENSDARG00000088908 5 1 1.000 - - - - - - - -
10. dync1i2b ENSDARG00000103195 46 1 1.000 - - - - - - - - dynein, cytoplasmic 1, intermediate chain 2b [Source:ZFIN;Acc:ZDB-GENE-090121-1]
11. LRRC4C ENSDARG00000113411 36 1 1.000 - - - - - - - - leucine rich repeat containing 4C [Source:ZFIN;Acc:ZDB-GENE-050522-533]
12. rbm10 ENSDARG00000077400 1 1 1.000 - - - - - - - - RNA binding motif protein 10 [Source:ZFIN;Acc:ZDB-GENE-100922-245]
13. si:dkey-228i19.32 si:dkey-228i19.32 9 1 1.000 - - - - - - - -
14. ZNF337_11 ZNF337_11 11 1 1.000 - - - - - - - -
15. CABZ01053592.1 ENSDARG00000117388 6 1 1.000 - - - - - - - -
16. BX470131.1 BX470131.1 86 1 1.000 - - - - - - - -
17. si:dkey-150k17.3 33 1 1.000 - - - - - - - - si:dkey-150k17.3
18. zgc:113210 ENSDARG00000002872 99 1 1.000 - - - - - - - - zgc:113210 [Source:ZFIN;Acc:ZDB-GENE-050320-83]
19. zgc:153039 ENSDARG00000102724 4 1 1.000 - - - - - - - - zgc:153039 [Source:ZFIN;Acc:ZDB-GENE-060929-736]
20. BEGAIN BEGAIN 39 1 1.000 - - - - - - - -
21. TRIM14_4 TRIM14_4 2 1 1.000 - - - - - - - -
22. nosip ENSDARG00000037958, ENSDARG00000112335 59 1 1.000 - - - - - - - - nitric oxide synthase interacting protein [Source:ZFIN;Acc:ZDB-GENE-041114-146]
23. VASH1 ENSDARG00000092716 33 1 1.000 - - - - - - - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
24. grik5 ENSDARG00000101449, ENSDARG00000111384 75 1 1.000 - - - - - - - - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
25. iqsec3b ENSDARG00000093091 10 1 1.000 - - - - - - - - IQ motif and Sec7 domain 3b [Source:ZFIN;Acc:ZDB-GENE-050420-210]
26. TRAPPC9 ENSDARG00000099118 26 1 1.000 - - - - - - - - trafficking protein particle complex 9 [Source:HGNC Symbol;Acc:HGNC:30832]
27. si:ch211-250c4.5 ENSDARG00000075943 10 1 - - - - 1.000 - - - - si:ch211-250c4.5 [Source:ZFIN;Acc:ZDB-GENE-081107-33]
28. synpr ENSDARG00000044278 20 1 1.000 - - - - - - - - synaptoporin [Source:ZFIN;Acc:ZDB-GENE-030616-625]
29. CABZ01113978.1 CABZ01113978.1 1 1 1.000 - - - - - - - -
30. ADAP2 ENSDARG00000070565 29 1 1.000 - - - - - - - - ArfGAP with dual PH domains 2 [Source:ZFIN;Acc:ZDB-GENE-070912-21]
31. SNORA31 SNORA31 23 1 1.000 - - - - - - - -
32. trim9 ENSDARG00000039123 53 1 1.000 - - - - - - - - tripartite motif containing 9 [Source:ZFIN;Acc:ZDB-GENE-030131-8043]
33. ARHGEF40 ENSDARG00000078979 25 1 1.000 - - - - - - - - Rho guanine nucleotide exchange factor (GEF) 40 [Source:ZFIN;Acc:ZDB-GENE-110623-2]
34. zgc:77118 ENSDARG00000014208, ENSDARG00000093176 63 1 1.000 - - - - - - - - zgc:77118 [Source:ZFIN;Acc:ZDB-GENE-040426-2211]
35. trpc1 ENSDARG00000061203 62 1 1.000 - - - - - - - - transient receptor potential cation channel, subfamily C, member 1 [Source:ZFIN;Acc:ZDB-GENE-070830-1]
36. CABZ01078944.1 CABZ01078944.1 9 1 1.000 - - - - - - - -
37. si:dkey-65b12.12 ENSDARG00000094458 26 1 1.000 - - - - - - - - si:dkey-65b12.12 [Source:ZFIN;Acc:ZDB-GENE-060526-325]
38. NPBWR2 NPBWR2 132 1 1.000 - - - - - - - -
39. AL929291.1 AL929291.1 16 1 1.000 - - - - - - - -
40. si:ch211-216b21.2 ENSDARG00000060253 54 1 1.000 - - - - - - - - si:ch211-216b21.2 [Source:ZFIN;Acc:ZDB-GENE-130603-96]
41. COX5B ENSDARG00000015978 70 1 1.000 - - - - - - - - cytochrome c oxidase subunit 5B [Source:HGNC Symbol;Acc:HGNC:2269]
42. CABZ01041804.1 CABZ01041804.1 312 1 1.000 - - - - - - - -
43. BX914198.1 BX914198.1 5 1 1.000 - - - - - - - -
44. helt ENSDARG00000056400 482 1 1.000 - - - - - - - - helt bHLH transcription factor [Source:ZFIN;Acc:ZDB-GENE-040824-6]
45. jakmip2 ENSDARG00000053547 32 1 1.000 - - - - - - - - janus kinase and microtubule interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-091204-293]
46. lppr4a lppr4a 141 1 1.000 - - - - - - - -
47. kcng4 kcng4 37 1 1.000 - - - - - - - -
48. SNORA19 SNORA19 24 1 1.000 - - - - - - - -
49. tecpr1a ENSDARG00000062515 7 1 - - - - 1.000 - - - - tectonin beta-propeller repeat containing 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1792]
50. s100t ENSDARG00000055589 453 1 1.000 - - - - - - - - S100 calcium binding protein T [Source:ZFIN;Acc:ZDB-GENE-050320-61]
51. shank2 ENSDARG00000062325 66 1 1.000 - - - - - - - - SH3 and multiple ankyrin repeat domains 2 [Source:ZFIN;Acc:ZDB-GENE-061207-58]
52. CCL-C11B CCL-C11B 51 1 1.000 - - - - - - - -
53. PGBD4 ENSDARG00000079328 20 1 1.000 - - - - - - - - piggyBac transposable element derived 4 [Source:ZFIN;Acc:ZDB-GENE-091204-417]
54. ARID5B ENSDARG00000037196 165 1 1.000 - - - - - - - - AT-rich interaction domain 5B [Source:ZFIN;Acc:ZDB-GENE-121214-272]
55. ZDHHC12 ZDHHC12 29 1 1.000 - - - - - - - -
56. CABZ01065506.1 CABZ01065506.1 204 1 1.000 - - - - - - - -
57. lrch4 ENSDARG00000068258 24 1 1.000 - - - - - - - - leucine-rich repeats and calponin homology (CH) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060503-749]
58. si:ch211-113a14.14 si:ch211-113a14.14 3 1 1.000 - - - - - - - -
59. si:dkey-203o14.2 si:dkey-203o14.2 5 1 1.000 - - - - - - - -
60. BICD1 BICD1 9 1 1.000 - - - - - - - -
61. zgc:101731 ENSDARG00000040965 27 1 1.000 - - - - - - - - zgc:101731 [Source:ZFIN;Acc:ZDB-GENE-040912-57]
62. BX649314.1 BX649314.1 3 1 1.000 - - - - - - - -
63. wu:fj39g12 ENSDARG00000043460 8 1 1.000 - - - - - - - - wu:fj39g12 [Source:ZFIN;Acc:ZDB-GENE-030131-7901]
64. ZNF784_2 ZNF784_2 181 1 1.000 - - - - - - - -
65. cnn1b ENSDARG00000102398 40 1 1.000 - - - - - - - - calponin 1, basic, smooth muscle, b [Source:ZFIN;Acc:ZDB-GENE-091118-54]
66. CRFA31.2 CRFA31.2 12 1 - - - - 1.000 - - - -
67. FP236631.1 FP236631.1 3 1 1.000 - - - - - - - -
68. tmem196b ENSDARG00000090140 20 1 1.000 - - - - - - - - transmembrane protein 196b [Source:ZFIN;Acc:ZDB-GENE-110914-248]
69. CABZ01076817.1 CABZ01076817.1 4 1 1.000 - - - - - - - -
70. BX530018.1 ENSDARG00000037576 2 1 1.000 - - - - - - - - D(1) dopamine receptor-like [Source:NCBI gene;Acc:567498]
71. grm6b ENSDARG00000025671, ENSDARG00000117152 118 1 1.000 - - - - - - - - glutamate receptor, metabotropic 6b [Source:ZFIN;Acc:ZDB-GENE-021120-2]
72. CABZ01073736.1 ENSDARG00000099438 81 1 1.000 - - - - - - - -
73. rtn4r ENSDARG00000090035 46 1 1.000 - - - - - - - - reticulon 4 receptor [Source:ZFIN;Acc:ZDB-GENE-040310-1]
74. BX323861.1 ENSDARG00000099765 37 1 1.000 - - - - - - - -
75. 5S_rRNA_22 5S_rRNA_22 45 1 1.000 - - - - - - - -
76. AP5Z1 ENSDARG00000078111 91 1 1.000 - - - - - - - - adaptor related protein complex 5 subunit zeta 1 [Source:ZFIN;Acc:ZDB-GENE-120508-2]
77. soga3a ENSDARG00000063311, ENSDARG00000088571, ENSDARG00000097245 11 1 1.000 - - - - - - - - SOGA family member 3a [Source:ZFIN;Acc:ZDB-GENE-100921-84]
78. DLK1 60 1 1.000 - - - - - - - - delta like non-canonical Notch ligand 1
79. CABZ01041860.1 CABZ01041860.1 4 1 - - - - 1.000 - - - -
80. DIP2B DIP2B 18 1 1.000 - - - - - - - -
81. CABZ01059406.1 ENSDARG00000088775 1 1 1.000 - - - - - - - -
82. CABZ01021433.1 ENSDARG00000105696 74 1 1.000 - - - - - - - - si:cabz01021433.2 [Source:NCBI gene;Acc:100333857]
83. trpm2 ENSDARG00000095696, ENSDARG00000101641 1 1 1.000 - - - - - - - - transient receptor potential cation channel, subfamily M, member 2 [Source:ZFIN;Acc:ZDB-GENE-061214-4]
84. si:dkey-266f7.10 ENSDARG00000086613 7 1 1.000 - - - - - - - - si:dkey-266f7.10 [Source:ZFIN;Acc:ZDB-GENE-120215-242]
85. lppr5b lppr5b 23 1 1.000 - - - - - - - -
86. BX324155.2 BX324155.2 1 1 1.000 - - - - - - - -
87. elovl4a ENSDARG00000006773 412 1 1.000 - - - - - - - - ELOVL fatty acid elongase 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1767]
88. si:ch73-57f22.2 ENSDARG00000087453 28 1 1.000 - - - - - - - - si:ch73-57f22.2 [Source:ZFIN;Acc:ZDB-GENE-110411-58]
89. si:dkeyp-53d3.3 ENSDARG00000098664 65 1 1.000 - - - - - - - - si:dkeyp-53d3.3 [Source:ZFIN;Acc:ZDB-GENE-050208-644]
90. zgc:174694 zgc:174694 2 1 1.000 - - - - - - - -
91. FUT9 FUT9 91 1 1.000 - - - - - - - -
92. LRFN2_1 LRFN2_1 17 1 1.000 - - - - - - - -
93. si:ch211-113a14.26_1 5 1 1.000 - - - - - - - - si:ch211-113a14.26
94. dnajb1b ENSDARG00000041394 25 1 - - - - 1.000 - - - - DnaJ (Hsp40) homolog, subfamily B, member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5455]
95. zgc:113307 ENSDARG00000044894 17 1 1.000 - - - - - - - - zgc:113307 [Source:ZFIN;Acc:ZDB-GENE-050522-29]
96. FAXC FAXC 102 1 1.000 - - - - - - - -
97. BX548021.2 BX548021.2 4 1 1.000 - - - - - - - -
98. si:dkey-49n23.3 ENSDARG00000095325 4 1 1.000 - - - - - - - - si:dkey-49n23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-799]
99. kcnt1 ENSDARG00000079484 45 1 1.000 - - - - - - - - potassium channel, subfamily T, member 1 [Source:ZFIN;Acc:ZDB-GENE-091231-1]
100. MAST1 MAST1 29 1 1.000 - - - - - - - -

There are 458 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA