Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-149p10.2

Gene Name Gene ID Reads Annotation
si:ch211-149p10.2 si:ch211-149p10.2 14










Genes with expression patterns similar to si:ch211-149p10.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-149p10.2 si:ch211-149p10.2 14 5 - - 1.000 - 1.000 - 1.000 1.000 1.000
2. RORC ENSDARG00000087195 9 1.553 - - - - 0.829 - - - 0.724 RAR-related orphan receptor C [Source:ZFIN;Acc:ZDB-GENE-110411-42]
3. ZSWIM2 ENSDARG00000075700 8 1.475 - - 0.768 - - - - - 0.707 zinc finger, SWIM-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-070719-8]
4. sdccag8 ENSDARG00000078947 68 1 - - - - - - 1.000 - - serologically defined colon cancer antigen 8 [Source:ZFIN;Acc:ZDB-GENE-090313-318]
5. CR628365.1 ENSDARG00000097736 29 1 - - - - - - 1.000 - -
6. bbs12 ENSDARG00000016112 38 1 - - - - - - 1.000 - - Bardet-Biedl syndrome 12 [Source:ZFIN;Acc:ZDB-GENE-070626-3]
7. clcn2 clcn2 13 0.961 - - - - 0.961 - - - -
8. si:dkey-117p18.2 si:dkey-117p18.2 104 0.948 - - - - - - 0.948 - -
9. FP074874.1 ENSDARG00000102679 40 0.948 - - - - - - 0.948 - - si:ch73-158p21.7 [Source:NCBI gene;Acc:100331388]
10. six3a ENSDARG00000058008, ENSDARG00000114971 586 0.948 - - - - - - 0.948 - - SIX homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-990415-127]
11. ighv14-1 ENSDARG00000096418 17 0.948 - - - - - - 0.948 - - immunoglobulin heavy variable 14-1 [Source:ZFIN;Acc:ZDB-GENE-040514-42]
12. FP565458.1 FP565458.1 61 0.948 - - - - - - 0.948 - -
13. si:dkeyp-33c10.5 11 0.948 - - - - - - 0.948 - - si:dkeyp-33c10.5, transcript variant X2
14. plaub ENSDARG00000039145 35 0.948 - - - - - - 0.948 - - plasminogen activator, urokinase b [Source:ZFIN;Acc:ZDB-GENE-030619-15]
15. zgc:174642_1 zgc:174642_1 20 0.948 - - - - - - 0.948 - -
16. si:dkey-241l7.4 ENSDARG00000089478 8 0.947 - - - - 0.947 - - - - si:dkey-241l7.4 [Source:ZFIN;Acc:ZDB-GENE-041014-238]
17. PRF1 PRF1 69 0.93 - - - - - - - - 0.930
18. parvab ENSDARG00000035629 2 0.93 - - - - - - - - 0.930 parvin, alpha b [Source:ZFIN;Acc:ZDB-GENE-070424-60]
19. vent ENSDARG00000100483 74 0.912 - - - - - - - - 0.912 ventral expressed homeobox [Source:ZFIN;Acc:ZDB-GENE-010108-2]
20. mcm10 ENSDARG00000045815 196 0.905 - - - - - - 0.905 - - minichromosome maintenance 10 replication initiation factor [Source:ZFIN;Acc:ZDB-GENE-041210-42]
21. USP43 USP43 14 0.901 - - - - - - - - 0.901
22. RBBP6_4 RBBP6_4 4 0.885 - - - - 0.885 - - - -
23. zte25 zte25 29 0.885 - - - - 0.885 - - - -
24. sult1st8 sult1st8 6 0.885 - - - - 0.885 - - - -
25. abcg2b ENSDARG00000079361, ENSDARG00000110043 11 0.885 - - - - 0.885 - - - - ATP-binding cassette, sub-family G (WHITE), member 2b [Source:ZFIN;Acc:ZDB-GENE-050517-36]
26. rdh1 ENSDARG00000017882 24 0.885 - - - - 0.885 - - - - retinol dehydrogenase 1 [Source:ZFIN;Acc:ZDB-GENE-030912-15]
27. si:ch211-196c10.6 si:ch211-196c10.6 3 0.885 - - - - 0.885 - - - -
28. si:ch73-222h13.1 ENSDARG00000087107 16 0.885 - - - - 0.885 - - - - si:ch73-222h13.1 [Source:ZFIN;Acc:ZDB-GENE-090313-144]
29. EXT1_1 EXT1_1 3 0.885 - - - - 0.885 - - - -
30. DUPD1 2 0.885 - - - - 0.885 - - - - dual specificity phosphatase and pro isomerase domain containing 1
31. rp1 ENSDARG00000077687 18 0.885 - - - - 0.885 - - - - retinitis pigmentosa 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-070912-612]
32. RBBP6_5 RBBP6_5 2 0.885 - - - - 0.885 - - - -
33. sema6e ENSDARG00000000189 35 0.885 - - - - 0.885 - - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E [Source:ZFIN;Acc:ZDB-GENE-040724-119]
34. MEF2A MEF2A 2 0.885 - - - - 0.885 - - - -
35. BX465848.2 ENSDARG00000116920 6 0.885 - - - - 0.885 - - - -
36. hif1al2 ENSDARG00000044550 140 0.883 - - - - - - 0.883 - - hypoxia inducible factor 1 subunit alpha, like 2 [Source:ZFIN;Acc:ZDB-GENE-050211-2]
37. tubb1 ENSDARG00000053066 364 0.883 - - - - - - 0.883 - - tubulin, beta 1 class VI [Source:ZFIN;Acc:ZDB-GENE-110408-5]
38. NUP160 ENSDARG00000027140 6 0.882 - - - - 0.882 - - - - nucleoporin 160 [Source:ZFIN;Acc:ZDB-GENE-040426-1603]
39. GBE1 GBE1 12 0.881 - - - - 0.881 - - - -
40. si:ch73-196i15.2 si:ch73-196i15.2 3 0.879 - - - - 0.879 - - - -
41. BX571811.1 ENSDARG00000105621 25 0.877 - - - - 0.877 - - - -
42. ntrk3a ENSDARG00000077228 12 0.876 - - - - 0.876 - - - - neurotrophic tyrosine kinase, receptor, type 3a [Source:ZFIN;Acc:ZDB-GENE-010126-3]
43. med15 ENSDARG00000014292 57 0.876 - - - - - - 0.876 - - mediator complex subunit 15 [Source:ZFIN;Acc:ZDB-GENE-040426-2032]
44. zgc:77816 zgc:77816 800 0.874 - - 0.874 - - - - - -
45. camta2 ENSDARG00000092799 5 0.872 - - - - 0.872 - - - - calmodulin binding transcription activator 2 [Source:ZFIN;Acc:ZDB-GENE-090313-6]
46. si:dkey-272j9.1 si:dkey-272j9.1 10 0.872 - - - - 0.872 - - - -
47. PITPNM3 ENSDARG00000055255 3 0.87 - - - - 0.870 - - - - PITPNM family member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9216]
48. RBBP6_3 RBBP6_3 34 0.868 - - - - 0.868 - - - -
49. si:ch73-383o19.2 si:ch73-383o19.2 3 0.867 - - - - 0.867 - - - -
50. urad ENSDARG00000071579, ENSDARG00000115541 46 0.866 - - - - 0.866 - - - - ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase [Source:ZFIN;Acc:ZDB-GENE-070112-472]
51. PARP4 ENSDARG00000069934 70 0.864 - - - - 0.864 - - - - poly (ADP-ribose) polymerase family, member 4 [Source:ZFIN;Acc:ZDB-GENE-070912-387]
52. lctlb ENSDARG00000016337 35 0.86 - - - - 0.860 - - - - lactase-like b [Source:ZFIN;Acc:ZDB-GENE-060503-93]
53. si:ch211-199g17.2 ENSDARG00000092310 243 0.86 - - - - - - 0.860 - - si:ch211-199g17.2 [Source:ZFIN;Acc:ZDB-GENE-060503-396]
54. cntnap5b ENSDARG00000075189 16 0.86 - - 0.860 - - - - - - contactin associated protein-like 5b [Source:ZFIN;Acc:ZDB-GENE-070705-209]
55. muc13b ENSDARG00000079647 67 0.858 - - - - 0.858 - - - - mucin 13b, cell surface associated [Source:ZFIN;Acc:ZDB-GENE-080220-61]
56. syngr2b_1 ENSDARG00000104470 24 0.853 - - - - 0.853 - - - - synaptogyrin 2b [Source:ZFIN;Acc:ZDB-GENE-070424-19]
57. nmrk1 ENSDARG00000037913 18 0.851 - - - - - - 0.851 - - nicotinamide riboside kinase 1 [Source:ZFIN;Acc:ZDB-GENE-050320-8]
58. cahz ENSDARG00000011166 5771 0.846 - - - - - - 0.846 - - carbonic anhydrase [Source:ZFIN;Acc:ZDB-GENE-980526-39]
59. esrrgb ENSDARG00000011696 108 0.842 - - - - 0.842 - - - - estrogen-related receptor gamma b [Source:ZFIN;Acc:ZDB-GENE-040616-4]
60. ldhbb ENSDARG00000071076 31 0.84 - - - - - - 0.840 - - lactate dehydrogenase Bb [Source:ZFIN;Acc:ZDB-GENE-040718-176]
61. hbae1 14666 0.84 - - - - - - 0.840 - - hemoglobin, alpha embryonic 1
62. C8H1orf173 C8H1orf173 10 0.836 - - - - 0.836 - - - -
63. ugt5c2 ENSDARG00000006372 11 0.832 - - - - 0.832 - - - - UDP glucuronosyltransferase 5 family, polypeptide C2 [Source:ZFIN;Acc:ZDB-GENE-060825-206]
64. fam163b ENSDARG00000073914 46 0.831 - - - - 0.831 - - - - family with sequence similarity 163, member B [Source:ZFIN;Acc:ZDB-GENE-091204-96]
65. rab14l ENSDARG00000035188 18 0.831 - - 0.831 - - - - - - RAB14, member RAS oncogene family, like [Source:ZFIN;Acc:ZDB-GENE-040426-1207]
66. si:dkey-57h18.2 33 0.83 - - - - - - 0.830 - - si:dkey-57h18.2, transcript variant X1
67. klfd klfd 625 0.83 - - - - - - 0.830 - -
68. stx11b.2 ENSDARG00000042231, ENSDARG00000110079 68 0.826 - - - - - - 0.826 - - syntaxin 11b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-050417-148]
69. kcnab2b ENSDARG00000062134 80 0.824 - - - - 0.824 - - - - potassium voltage-gated channel, shaker-related subfamily, beta member 2 b [Source:ZFIN;Acc:ZDB-GENE-080219-36]
70. qrsl1 ENSDARG00000032704 200 0.822 - - - - - - 0.822 - - glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5540]
71. MPP3 MPP3 13 0.816 - - - - 0.816 - - - -
72. SNORA63_2 SNORA63_2 6 0.814 - - 0.814 - - - - - -
73. CABZ01117437.1 CABZ01117437.1 11 0.813 - - - - 0.813 - - - -
74. gnl1 ENSDARG00000061789, ENSDARG00000114276 78 0.807 - - - - 0.807 - - - - guanine nucleotide binding protein-like 1 [Source:ZFIN;Acc:ZDB-GENE-060323-1]
75. si:busm1-118j2.5 si:busm1-118j2.5 10462 0.802 - - - - - - 0.802 - -
76. tpd52l1 ENSDARG00000042548 61 0.801 - - - - - - 0.801 - - tumor protein D52-like 1 [Source:ZFIN;Acc:ZDB-GENE-050522-121]
77. AL935210.1 ENSDARG00000088330 24618 0.8 - - - - - - 0.800 - - hemoglobin, alpha embryonic 1.3 [Source:NCBI gene;Acc:572729]
78. C6H3orf18 C6H3orf18 7 0.799 - - 0.799 - - - - - -
79. hbz 327 0.798 - - - - - - 0.798 - - hemoglobin subunit zeta
80. si:dkey-25o16.2 1990 0.797 - - - - - - 0.797 - - si:dkey-25o16.2, transcript variant X1
81. FAM78A FAM78A 61 0.796 - - - - - - 0.796 - -
82. si:dkey-78a14.4 ENSDARG00000036066 17 0.796 - - - - - - 0.796 - - si:dkey-78a14.4 [Source:ZFIN;Acc:ZDB-GENE-110408-8]
83. si:ch211-95j8.3 ENSDARG00000092580 20 0.796 - - - - - - 0.796 - - si:ch211-95j8.3 [Source:ZFIN;Acc:ZDB-GENE-091204-307]
84. tg ENSDARG00000020084 40 0.795 - - 0.795 - - - - - - thyroglobulin [Source:ZFIN;Acc:ZDB-GENE-030519-1]
85. SLC5A8 ENSDARG00000087120 60 0.795 - - - - 0.795 - - - - solute carrier family 5 (sodium/monocarboxylate cotransporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-141211-63]
86. QDPR QDPR 11 0.794 - - 0.794 - - - - - -
87. adcyap1a ENSDARG00000004015 67 0.794 - - 0.794 - - - - - - adenylate cyclase activating polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-020809-4]
88. CU929230.1 ENSDARG00000030665 48 0.793 - - - - - - 0.793 - - transcription elongation regulator 1b (CA150) [Source:NCBI gene;Acc:797473]
89. zgc:171544 zgc:171544 11 0.793 - - 0.793 - - - - - -
90. slc4a1a ENSDARG00000012881 8972 0.791 - - - - - - 0.791 - - solute carrier family 4 (anion exchanger), member 1a (Diego blood group) [Source:ZFIN;Acc:ZDB-GENE-010525-1]
91. gaa ENSDARG00000090714 19 0.79 - - - - 0.790 - - - - glucosidase, alpha; acid (Pompe disease, glycogen storage disease type II) [Source:ZFIN;Acc:ZDB-GENE-070212-2]
92. si:dkey-45d16.4 72 0.79 - - 0.790 - - - - - - si:dkey-45d16.4
93. hnf1a ENSDARG00000009470 60 0.789 - - 0.789 - - - - - - HNF1 homeobox a [Source:ZFIN;Acc:ZDB-GENE-021206-12]
94. myct1 myct1 217 0.787 - - - - - - 0.787 - -
95. mob1a_1 ENSDARG00000102320, ENSDARG00000111884, ENSDARG00000116249 91 0.787 - - - - 0.787 - - - - MOB kinase activator 1A [Source:ZFIN;Acc:ZDB-GENE-030131-6506]
96. epor_1 ENSDARG00000090834 366 0.785 - - - - - - 0.785 - - erythropoietin receptor [Source:ZFIN;Acc:ZDB-GENE-071116-1]
97. rsph4a ENSDARG00000067606 132 0.785 - - - - - - 0.785 - - radial spoke head component 4A [Source:ZFIN;Acc:ZDB-GENE-030131-7437]
98. cox7a1 ENSDARG00000069464, ENSDARG00000112682 243 0.785 - - - - - - 0.785 - - cytochrome c oxidase subunit 7A1 [Source:ZFIN;Acc:ZDB-GENE-060929-340]
99. dclre1c ENSDARG00000045704, ENSDARG00000110444, ENSDARG00000113866 100 0.785 - - - - - - 0.785 - - DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041210-72]
100. dapk2 dapk2 24 0.785 - - - - - - 0.785 - -

There are 100 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA