Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-149b19.4

Gene Name Gene ID Reads Annotation
si:ch211-149b19.4 ENSDARG00000095911 49 si:ch211-149b19.4 [Source:ZFIN;Acc:ZDB-GENE-110411-90]










Genes with expression patterns similar to si:ch211-149b19.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-149b19.4 ENSDARG00000095911 49 6 - 1.000 - 1.000 1.000 1.000 - 1.000 1.000 si:ch211-149b19.4 [Source:ZFIN;Acc:ZDB-GENE-110411-90]
2. cntnap5b ENSDARG00000075189 16 1.795 - 1.000 - - - 0.795 - - - contactin associated protein-like 5b [Source:ZFIN;Acc:ZDB-GENE-070705-209]
3. cyp39a1 ENSDARG00000017982 4 1.779 - - - - - 0.944 - 0.835 - cytochrome P450, family 39, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-041014-339]
4. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 1.697 - 0.713 - - - 0.984 - - - FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]
5. si:dkey-103i16.2_1 si:dkey-103i16.2_1 105 1.657 - 0.713 - - - 0.944 - - -
6. akt3a_1 ENSDARG00000104810 12 1.657 - 0.713 - - - 0.944 - - - v-akt murine thymoma viral oncogene homolog 3a [Source:ZFIN;Acc:ZDB-GENE-050419-180]
7. TENM2 ENSDARG00000037122 48 1.657 - 0.713 - - - 0.944 - - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
8. mstnb ENSDARG00000069133 3 1.657 - 0.713 - - - 0.944 - - - myostatin b [Source:ZFIN;Acc:ZDB-GENE-990415-165]
9. si:ch211-232k18.2 si:ch211-232k18.2 2 1.657 - 0.713 - - - 0.944 - - -
10. chst1 ENSDARG00000088593, ENSDARG00000112011 102 1.612 - 0.713 - - - 0.899 - - - carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-21]
11. gdf10a ENSDARG00000095378 12 1.525 - 0.713 - - - 0.812 - - - growth differentiation factor 10a [Source:ZFIN;Acc:ZDB-GENE-090312-17]
12. gphnb ENSDARG00000100851 118 1.52 - 0.713 - - - 0.807 - - - gephyrin b [Source:ZFIN;Acc:ZDB-GENE-070705-4]
13. si:dkey-31e10.5 ENSDARG00000070502 4 1.464 - 0.713 - - - - - 0.751 - si:dkey-31e10.5 [Source:ZFIN;Acc:ZDB-GENE-121214-76]
14. CU855821.2 CU855821.2 21 1.444 - 0.713 - - - - - 0.731 -
15. cdh4 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 97 1.414 - 0.713 - - - 0.701 - - - cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
16. si:dkey-225n22.4 ENSDARG00000077245 86 1 - 1.000 - - - - - - - si:dkey-225n22.4 [Source:ZFIN;Acc:ZDB-GENE-120709-30]
17. EIF4G3 EIF4G3 24 1 - 1.000 - - - - - - -
18. gdf11 ENSDARG00000044924 534 1 - 1.000 - - - - - - - growth differentiation factor 11 [Source:ZFIN;Acc:ZDB-GENE-040427-2]
19. SNORD88 SNORD88 232 1 - 1.000 - - - - - - -
20. GPR180 73 1 - 1.000 - - - - - - - G protein-coupled receptor 180, transcript variant X2
21. si:dkey-14o18.1 si:dkey-14o18.1 108 1 - 1.000 - - - - - - -
22. zgc:194659 ENSDARG00000079347 17 1 - 1.000 - - - - - - - zgc:194659 [Source:ZFIN;Acc:ZDB-GENE-081022-139]
23. pgls ENSDARG00000021233 264 1 - 1.000 - - - - - - - 6-phosphogluconolactonase [Source:ZFIN;Acc:ZDB-GENE-040822-9]
24. zswim7 ENSDARG00000067608 179 1 - 1.000 - - - - - - - zinc finger, SWIM-type containing 7 [Source:ZFIN;Acc:ZDB-GENE-030131-4255]
25. BAI1 BAI1 173 1 - 1.000 - - - - - - -
26. chico ENSDARG00000019588 77 1 - 1.000 - - - - - - - chico [Source:ZFIN;Acc:ZDB-GENE-000210-28]
27. myha ENSDARG00000095930 143 1 - 1.000 - - - - - - - myosin, heavy chain a [Source:ZFIN;Acc:ZDB-GENE-060531-50]
28. glt8d2 ENSDARG00000057942, ENSDARG00000111260 34 1 - 1.000 - - - - - - - glycosyltransferase 8 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041210-98]
29. tbx6l 87 1 - 1.000 - - - - - - - T-box 6, like, transcript variant X2
30. mthfd1a ENSDARG00000018266 286 1 - 1.000 - - - - - - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1a, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase [Source:ZFIN;Acc:ZDB-GENE-041001-127]
31. stk19 ENSDARG00000086628 85 1 - 1.000 - - - - - - - serine/threonine kinase 19 [Source:ZFIN;Acc:ZDB-GENE-000616-11]
32. mdm1 ENSDARG00000045675 64 1 - 1.000 - - - - - - - Mdm1 nuclear protein homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-041210-117]
33. lss ENSDARG00000061274 68 1 - 1.000 - - - - - - - lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase) [Source:ZFIN;Acc:ZDB-GENE-050119-7]
34. syt12 ENSDARG00000101776 215 1 - 1.000 - - - - - - - synaptotagmin XII [Source:ZFIN;Acc:ZDB-GENE-081022-147]
35. zgc:113162 ENSDARG00000052923 62 1 - 1.000 - - - - - - - zgc:113162 [Source:ZFIN;Acc:ZDB-GENE-050522-530]
36. zgc:174573 ENSDARG00000079035 89 1 - 1.000 - - - - - - - zgc:174573 [Source:ZFIN;Acc:ZDB-GENE-030131-2123]
37. trpa1b ENSDARG00000031875 39 1 - 1.000 - - - - - - - transient receptor potential cation channel, subfamily A, member 1b [Source:ZFIN;Acc:ZDB-GENE-050106-1]
38. INTS4 ENSDARG00000102953 38 1 - 1.000 - - - - - - - integrator complex subunit 4 [Source:ZFIN;Acc:ZDB-GENE-120215-81]
39. cx45.6 cx45.6 26 1 - 1.000 - - - - - - -
40. nudt18 ENSDARG00000041576 61 1 - 1.000 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 18 [Source:ZFIN;Acc:ZDB-GENE-050417-388]
41. rdh8b ENSDARG00000105060 183 1 - 1.000 - - - - - - - retinol dehydrogenase 8b [Source:ZFIN;Acc:ZDB-GENE-040426-1759]
42. FAM69A FAM69A 28 1 - 1.000 - - - - - - -
43. secisbp2 ENSDARG00000073892 79 0.988 - - - - - 0.988 - - - SECIS binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050208-263]
44. tecrl2 tecrl2 11 0.988 - - - - - 0.988 - - -
45. RPS11 ENSDARG00000053058 32 0.947 - 0.947 - - - - - - - ribosomal protein S11 [Source:ZFIN;Acc:ZDB-GENE-040426-2701]
46. chrnb3a ENSDARG00000052764, ENSDARG00000112769 139 0.947 - 0.947 - - - - - - - cholinergic receptor, nicotinic, beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040108-1]
47. cacnb4b ENSDARG00000062174 159 0.947 - 0.947 - - - - - - - calcium channel, voltage-dependent, beta 4b subunit [Source:ZFIN;Acc:ZDB-GENE-060421-7907]
48. CABZ01019904.1 ENSDARG00000104193 6 0.947 - 0.947 - - - - - - -
49. ntrk2a ENSDARG00000059897 185 0.945 - 0.945 - - - - - - - neurotrophic tyrosine kinase, receptor, type 2a [Source:ZFIN;Acc:ZDB-GENE-010126-1]
50. ERP27 2 0.944 - - - - - 0.944 - - - endoplasmic reticulum protein 27
51. CABZ01048675.1 CABZ01048675.1 4 0.944 - - - - - 0.944 - - -
52. sat1b ENSDARG00000032272, ENSDARG00000112956 72 0.944 - - - - - 0.944 - - - spermidine/spermine N1-acetyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-041001-39]
53. si:ch73-155e10.1 si:ch73-155e10.1 13 0.944 - - - - - 0.944 - - -
54. BX248582.3 BX248582.3 3 0.944 - - - - - 0.944 - - -
55. hsd17b2 ENSDARG00000045553 14 0.944 - - - - - 0.944 - - - hydroxysteroid (17-beta) dehydrogenase 2 [Source:ZFIN;Acc:ZDB-GENE-040928-1]
56. PLBD1 ENSDARG00000063313 1 0.944 - - - - - 0.944 - - - phospholipase B domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050411-22]
57. CABZ01021435.3 CABZ01021435.3 5 0.944 - - - - - 0.944 - - -
58. 5S_rRNA_4 5S_rRNA_4 0 0.944 - - - - - 0.944 - - -
59. TSPEAR TSPEAR 9 0.944 - - - - - 0.944 - - -
60. osbp2 ENSDARG00000053487 42 0.944 - - - - - 0.944 - - - oxysterol binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-091113-18]
61. CABZ01079258.1 CABZ01079258.1 3 0.944 - - - - - 0.944 - - -
62. CABZ01090303.1 CABZ01090303.1 2 0.944 - - - - - 0.944 - - -
63. itm1 itm1 32 0.944 - - - - - 0.944 - - -
64. ppp1r9a ENSDARG00000061304 12 0.944 - - - - - 0.944 - - - protein phosphatase 1, regulatory subunit 9A [Source:ZFIN;Acc:ZDB-GENE-060503-660]
65. si:ch73-167f18.4 si:ch73-167f18.4 9 0.944 - - - - - 0.944 - - -
66. si:dkey-25c4.1 si:dkey-25c4.1 1 0.944 - - - - - 0.944 - - -
67. tatdn3 ENSDARG00000054076 130 0.944 - - - - - 0.944 - - - TatD DNase domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050522-192]
68. zgc:173702 ENSDARG00000110229 411 0.944 - - - - - 0.944 - - - zgc:173702 [Source:ZFIN;Acc:ZDB-GENE-080208-3]
69. CU861891.1 ENSDARG00000097162 0 0.944 - - - - - 0.944 - - -
70. rab11bb_1 ENSDARG00000090086 7 0.944 - - - - - 0.944 - - - RAB11B, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-293]
71. setd6 ENSDARG00000043986, ENSDARG00000113991 194 0.944 - - - - - 0.944 - - - SET domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-1067]
72. zgc:153642 ENSDARG00000052900 0 0.944 - - - - - 0.944 - - - zgc:153642 [Source:ZFIN;Acc:ZDB-GENE-061013-527]
73. lct ENSDARG00000060671 4 0.944 - - - - - 0.944 - - - lactase [Source:ZFIN;Acc:ZDB-GENE-081104-434]
74. TMEM241 ENSDARG00000090685 11 0.944 - - - - - 0.944 - - - transmembrane protein 241 [Source:ZFIN;Acc:ZDB-GENE-131127-368]
75. EXT1 EXT1 3 0.944 - - - - - 0.944 - - -
76. mfsd4a mfsd4a 179 0.944 - - - - - 0.944 - - -
77. trhra ENSDARG00000076546 3 0.944 - - - - - 0.944 - - - thyrotropin-releasing hormone receptor a [Source:ZFIN;Acc:ZDB-GENE-100922-18]
78. si:ch73-116o1.3 si:ch73-116o1.3 1 0.944 - - - - - 0.944 - - -
79. CABZ01044611.1 CABZ01044611.1 8 0.944 - - - - - 0.944 - - -
80. si:dkey-147f3.4 ENSDARG00000071029, ENSDARG00000092077 36 0.944 - - - - - 0.944 - - - si:dkey-147f3.4 [Source:ZFIN;Acc:ZDB-GENE-061009-29]
81. si:dkey-30k22.8 si:dkey-30k22.8 7 0.944 - - - - - 0.944 - - -
82. si:dkey-57a22.12 si:dkey-57a22.12 23 0.944 - - - - - 0.944 - - -
83. zgc:114046 ENSDARG00000091728 68 0.944 - - - - - 0.944 - - - zgc:114046 [Source:ZFIN;Acc:ZDB-GENE-050320-24]
84. v2rh9 ENSDARG00000056009 0 0.944 - - - - - 0.944 - - - vomeronasal 2 receptor, h9 [Source:ZFIN;Acc:ZDB-GENE-050419-176]
85. CABZ01060030.1 ENSDARG00000106579 55 0.944 - - - - - 0.944 - - - rho-related BTB domain-containing protein 2-like [Source:NCBI gene;Acc:100331257]
86. nr5a1b ENSDARG00000023362 54 0.944 - - - - - 0.944 - - - nuclear receptor subfamily 5, group A, member 1b [Source:ZFIN;Acc:ZDB-GENE-040702-6]
87. rgs8 ENSDARG00000070037, ENSDARG00000111478 37 0.944 - - - - - 0.944 - - - regulator of G protein signaling 8 [Source:ZFIN;Acc:ZDB-GENE-040718-264]
88. hip1r hip1r 10 0.944 - - - - - 0.944 - - -
89. MRC2 ENSDARG00000078135, ENSDARG00000111490 10 0.944 - - - - - 0.944 - - - mannose receptor, C type 2 [Source:ZFIN;Acc:ZDB-GENE-090915-5]
90. si:ch211-285c6.2 ENSDARG00000079234 1 0.944 - - - - - 0.944 - - - si:ch211-285c6.2 [Source:ZFIN;Acc:ZDB-GENE-040724-168]
91. si:ch211-121j5.2 si:ch211-121j5.2 86 0.944 - - - - - 0.944 - - -
92. si:dkey-47k20.3 ENSDARG00000029635 0 0.944 - - - - - 0.944 - - - si:dkey-47k20.3 [Source:ZFIN;Acc:ZDB-GENE-060503-830]
93. ela3l ENSDARG00000007276 11 0.944 - - - - - 0.944 - - - elastase 3 like [Source:ZFIN;Acc:ZDB-GENE-060710-2]
94. si:rp71-7l19.7 si:rp71-7l19.7 1 0.944 - - - - - 0.944 - - -
95. rgs9bp ENSDARG00000009466 41 0.944 - - - - - 0.944 - - - regulator of G protein signaling 9 binding protein [Source:ZFIN;Acc:ZDB-GENE-030728-1]
96. MFAP4_4 MFAP4_4 9 0.944 - - - - - 0.944 - - -
97. p4ha1a_1 ENSDARG00000033537, ENSDARG00000114754 36 0.944 - - - - - 0.944 - - - prolyl 4-hydroxylase, alpha polypeptide I a [Source:ZFIN;Acc:ZDB-GENE-040724-91]
98. DKK3 DKK3 12 0.944 - - - - - 0.944 - - -
99. si:dkey-266f7.10 ENSDARG00000086613 7 0.944 - - - - - 0.944 - - - si:dkey-266f7.10 [Source:ZFIN;Acc:ZDB-GENE-120215-242]
100. efemp2b_1 ENSDARG00000020811 77 0.944 - - - - - 0.944 - - - EGF containing fibulin extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-030219-125]

There are 634 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA