Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-149b19.4

Gene Name Gene ID Reads Annotation
si:ch211-149b19.4 ENSDARG00000095911 49 si:ch211-149b19.4 [Source:ZFIN;Acc:ZDB-GENE-110411-90]










Genes with expression patterns similar to si:ch211-149b19.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-149b19.4 ENSDARG00000095911 49 6 - 1.000 - 1.000 1.000 1.000 - 1.000 1.000 si:ch211-149b19.4 [Source:ZFIN;Acc:ZDB-GENE-110411-90]
2. cntnap5b ENSDARG00000075189 16 1.795 - 1.000 - - - 0.795 - - - contactin associated protein-like 5b [Source:ZFIN;Acc:ZDB-GENE-070705-209]
3. cyp39a1 ENSDARG00000017982 4 1.779 - - - - - 0.944 - 0.835 - cytochrome P450, family 39, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-041014-339]
4. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 1.697 - 0.713 - - - 0.984 - - - FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]
5. si:dkey-103i16.2_1 si:dkey-103i16.2_1 105 1.657 - 0.713 - - - 0.944 - - -
6. akt3a_1 ENSDARG00000104810 12 1.657 - 0.713 - - - 0.944 - - - v-akt murine thymoma viral oncogene homolog 3a [Source:ZFIN;Acc:ZDB-GENE-050419-180]
7. TENM2 ENSDARG00000037122 48 1.657 - 0.713 - - - 0.944 - - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
8. si:ch211-232k18.2 si:ch211-232k18.2 2 1.657 - 0.713 - - - 0.944 - - -
9. mstnb ENSDARG00000069133 3 1.657 - 0.713 - - - 0.944 - - - myostatin b [Source:ZFIN;Acc:ZDB-GENE-990415-165]
10. chst1 ENSDARG00000088593, ENSDARG00000112011 102 1.612 - 0.713 - - - 0.899 - - - carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-21]
11. gdf10a ENSDARG00000095378 12 1.525 - 0.713 - - - 0.812 - - - growth differentiation factor 10a [Source:ZFIN;Acc:ZDB-GENE-090312-17]
12. gphnb ENSDARG00000100851 118 1.52 - 0.713 - - - 0.807 - - - gephyrin b [Source:ZFIN;Acc:ZDB-GENE-070705-4]
13. si:dkey-31e10.5 ENSDARG00000070502 4 1.464 - 0.713 - - - - - 0.751 - si:dkey-31e10.5 [Source:ZFIN;Acc:ZDB-GENE-121214-76]
14. CU855821.2 CU855821.2 21 1.444 - 0.713 - - - - - 0.731 -
15. cdh4 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 97 1.414 - 0.713 - - - 0.701 - - - cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
16. zgc:194659 ENSDARG00000079347 17 1 - 1.000 - - - - - - - zgc:194659 [Source:ZFIN;Acc:ZDB-GENE-081022-139]
17. trpa1b ENSDARG00000031875 39 1 - 1.000 - - - - - - - transient receptor potential cation channel, subfamily A, member 1b [Source:ZFIN;Acc:ZDB-GENE-050106-1]
18. FAM69A FAM69A 28 1 - 1.000 - - - - - - -
19. pgls ENSDARG00000021233 264 1 - 1.000 - - - - - - - 6-phosphogluconolactonase [Source:ZFIN;Acc:ZDB-GENE-040822-9]
20. rdh8b ENSDARG00000105060 183 1 - 1.000 - - - - - - - retinol dehydrogenase 8b [Source:ZFIN;Acc:ZDB-GENE-040426-1759]
21. EIF4G3 EIF4G3 24 1 - 1.000 - - - - - - -
22. lss ENSDARG00000061274 68 1 - 1.000 - - - - - - - lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase) [Source:ZFIN;Acc:ZDB-GENE-050119-7]
23. si:dkey-225n22.4 ENSDARG00000077245 86 1 - 1.000 - - - - - - - si:dkey-225n22.4 [Source:ZFIN;Acc:ZDB-GENE-120709-30]
24. cx45.6 cx45.6 26 1 - 1.000 - - - - - - -
25. zswim7 ENSDARG00000067608 179 1 - 1.000 - - - - - - - zinc finger, SWIM-type containing 7 [Source:ZFIN;Acc:ZDB-GENE-030131-4255]
26. myha ENSDARG00000095930 143 1 - 1.000 - - - - - - - myosin, heavy chain a [Source:ZFIN;Acc:ZDB-GENE-060531-50]
27. GPR180 73 1 - 1.000 - - - - - - - G protein-coupled receptor 180, transcript variant X2
28. mdm1 ENSDARG00000045675 64 1 - 1.000 - - - - - - - Mdm1 nuclear protein homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-041210-117]
29. stk19 ENSDARG00000086628 85 1 - 1.000 - - - - - - - serine/threonine kinase 19 [Source:ZFIN;Acc:ZDB-GENE-000616-11]
30. syt12 ENSDARG00000101776 215 1 - 1.000 - - - - - - - synaptotagmin XII [Source:ZFIN;Acc:ZDB-GENE-081022-147]
31. chico ENSDARG00000019588 77 1 - 1.000 - - - - - - - chico [Source:ZFIN;Acc:ZDB-GENE-000210-28]
32. INTS4 ENSDARG00000102953 38 1 - 1.000 - - - - - - - integrator complex subunit 4 [Source:ZFIN;Acc:ZDB-GENE-120215-81]
33. mthfd1a ENSDARG00000018266 286 1 - 1.000 - - - - - - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1a, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase [Source:ZFIN;Acc:ZDB-GENE-041001-127]
34. si:dkey-14o18.1 si:dkey-14o18.1 108 1 - 1.000 - - - - - - -
35. SNORD88 SNORD88 232 1 - 1.000 - - - - - - -
36. nudt18 ENSDARG00000041576 61 1 - 1.000 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 18 [Source:ZFIN;Acc:ZDB-GENE-050417-388]
37. tbx6l 87 1 - 1.000 - - - - - - - T-box 6, like, transcript variant X2
38. BAI1 BAI1 173 1 - 1.000 - - - - - - -
39. gdf11 ENSDARG00000044924 534 1 - 1.000 - - - - - - - growth differentiation factor 11 [Source:ZFIN;Acc:ZDB-GENE-040427-2]
40. zgc:174573 ENSDARG00000079035 89 1 - 1.000 - - - - - - - zgc:174573 [Source:ZFIN;Acc:ZDB-GENE-030131-2123]
41. glt8d2 ENSDARG00000057942, ENSDARG00000111260 34 1 - 1.000 - - - - - - - glycosyltransferase 8 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041210-98]
42. zgc:113162 ENSDARG00000052923 62 1 - 1.000 - - - - - - - zgc:113162 [Source:ZFIN;Acc:ZDB-GENE-050522-530]
43. secisbp2 ENSDARG00000073892 79 0.988 - - - - - 0.988 - - - SECIS binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050208-263]
44. tecrl2 tecrl2 11 0.988 - - - - - 0.988 - - -
45. RPS11 ENSDARG00000053058 32 0.947 - 0.947 - - - - - - - ribosomal protein S11 [Source:ZFIN;Acc:ZDB-GENE-040426-2701]
46. cacnb4b ENSDARG00000062174 159 0.947 - 0.947 - - - - - - - calcium channel, voltage-dependent, beta 4b subunit [Source:ZFIN;Acc:ZDB-GENE-060421-7907]
47. chrnb3a ENSDARG00000052764, ENSDARG00000112769 139 0.947 - 0.947 - - - - - - - cholinergic receptor, nicotinic, beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040108-1]
48. CABZ01019904.1 ENSDARG00000104193 6 0.947 - 0.947 - - - - - - -
49. ntrk2a ENSDARG00000059897 185 0.945 - 0.945 - - - - - - - neurotrophic tyrosine kinase, receptor, type 2a [Source:ZFIN;Acc:ZDB-GENE-010126-1]
50. hoxc9a ENSDARG00000092809 18 0.944 - - - - - 0.944 - - - homeobox C9a [Source:ZFIN;Acc:ZDB-GENE-000328-5]
51. si:dkey-47k20.3 ENSDARG00000029635 0 0.944 - - - - - 0.944 - - - si:dkey-47k20.3 [Source:ZFIN;Acc:ZDB-GENE-060503-830]
52. USF2 ENSDARG00000020228 3 0.944 - - - - - 0.944 - - - upstream transcription factor 2, c-fos interacting [Source:ZFIN;Acc:ZDB-GENE-030131-8475]
53. osbp2 ENSDARG00000053487 42 0.944 - - - - - 0.944 - - - oxysterol binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-091113-18]
54. DKK3 DKK3 12 0.944 - - - - - 0.944 - - -
55. si:dkey-208k4.1 si:dkey-208k4.1 15 0.944 - - - - - 0.944 - - -
56. birc5b ENSDARG00000055655, ENSDARG00000110817 8 0.944 - - - - - 0.944 - - - baculoviral IAP repeat containing 5b [Source:ZFIN;Acc:ZDB-GENE-030826-2]
57. mir124-1 10 0.944 - - - - - 0.944 - - - microRNA 124-1
58. si:dkey-20i20.13 si:dkey-20i20.13 0 0.944 - - - - - 0.944 - - -
59. prox2 ENSDARG00000041952, ENSDARG00000117137 112 0.944 - - - - - 0.944 - - - prospero homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-081003-3]
60. FAM163A_1 ENSDARG00000093021 6 0.944 - - - - - 0.944 - - - family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
61. CABZ01090303.1 CABZ01090303.1 2 0.944 - - - - - 0.944 - - -
62. dapk2 dapk2 24 0.944 - - - - - 0.944 - - -
63. si:rp71-1c10.10 ENSDARG00000086255, ENSDARG00000109343 14 0.944 - - - - - 0.944 - - - si:rp71-1c10.10 [Source:ZFIN;Acc:ZDB-GENE-130603-55]
64. dre-mir-196c dre-mir-196c 2 0.944 - - - - - 0.944 - - -
65. vip ENSDARG00000078247 10 0.944 - - - - - 0.944 - - - vasoactive intestinal peptide [Source:ZFIN;Acc:ZDB-GENE-080204-3]
66. p4ha1a_1 ENSDARG00000033537, ENSDARG00000114754 36 0.944 - - - - - 0.944 - - - prolyl 4-hydroxylase, alpha polypeptide I a [Source:ZFIN;Acc:ZDB-GENE-040724-91]
67. si:dkey-97l20.5 si:dkey-97l20.5 33 0.944 - - - - - 0.944 - - -
68. rbfox3l rbfox3l 34 0.944 - - - - - 0.944 - - -
69. efr3ba ENSDARG00000033516 19 0.944 - - - - - 0.944 - - - EFR3 homolog Ba (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030616-64]
70. si:ch211-39a7.1 ENSDARG00000037427 31 0.944 - - - - - 0.944 - - - si:ch211-39a7.1 [Source:ZFIN;Acc:ZDB-GENE-060503-606]
71. CABZ01060030.1 ENSDARG00000106579 55 0.944 - - - - - 0.944 - - - rho-related BTB domain-containing protein 2-like [Source:NCBI gene;Acc:100331257]
72. nupl2 ENSDARG00000029043 105 0.944 - - - - - 0.944 - - - nucleoporin like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2292]
73. tecpr1a ENSDARG00000062515 7 0.944 - - - - - 0.944 - - - tectonin beta-propeller repeat containing 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1792]
74. lct ENSDARG00000060671 4 0.944 - - - - - 0.944 - - - lactase [Source:ZFIN;Acc:ZDB-GENE-081104-434]
75. hip1r hip1r 10 0.944 - - - - - 0.944 - - -
76. UIMC1 200 0.944 - - - - - 0.944 - - - ubiquitin interaction motif containing 1
77. ela3l ENSDARG00000007276 11 0.944 - - - - - 0.944 - - - elastase 3 like [Source:ZFIN;Acc:ZDB-GENE-060710-2]
78. si:dkey-122c11.7 ENSDARG00000103721 3 0.944 - - - - - 0.944 - - - si:dkey-122c11.7 [Source:ZFIN;Acc:ZDB-GENE-110913-120]
79. abcd1 ENSDARG00000074876 6 0.944 - - - - - 0.944 - - - ATP-binding cassette, sub-family D (ALD), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-27]
80. trhra ENSDARG00000076546 3 0.944 - - - - - 0.944 - - - thyrotropin-releasing hormone receptor a [Source:ZFIN;Acc:ZDB-GENE-100922-18]
81. zgc:114046 ENSDARG00000091728 68 0.944 - - - - - 0.944 - - - zgc:114046 [Source:ZFIN;Acc:ZDB-GENE-050320-24]
82. si:ch211-199o1.2 ENSDARG00000056210 33 0.944 - - - - - 0.944 - - - si:ch211-199o1.2 [Source:ZFIN;Acc:ZDB-GENE-060503-867]
83. si:ch73-167f18.4 si:ch73-167f18.4 9 0.944 - - - - - 0.944 - - -
84. fam19a5 fam19a5 8 0.944 - - - - - 0.944 - - -
85. rab11bb_1 ENSDARG00000090086 7 0.944 - - - - - 0.944 - - - RAB11B, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-293]
86. ERP27 2 0.944 - - - - - 0.944 - - - endoplasmic reticulum protein 27
87. 5S_rRNA_19 5S_rRNA_19 1 0.944 - - - - - 0.944 - - -
88. mfsd4a mfsd4a 179 0.944 - - - - - 0.944 - - -
89. si:ch211-202h22.10 ENSDARG00000087290 13 0.944 - - - - - 0.944 - - - si:ch211-202h22.10 [Source:ZFIN;Acc:ZDB-GENE-110914-121]
90. nr5a1b ENSDARG00000023362 54 0.944 - - - - - 0.944 - - - nuclear receptor subfamily 5, group A, member 1b [Source:ZFIN;Acc:ZDB-GENE-040702-6]
91. setd6 ENSDARG00000043986, ENSDARG00000113991 194 0.944 - - - - - 0.944 - - - SET domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-1067]
92. si:dkey-147f3.4 ENSDARG00000071029, ENSDARG00000092077 36 0.944 - - - - - 0.944 - - - si:dkey-147f3.4 [Source:ZFIN;Acc:ZDB-GENE-061009-29]
93. si:ch211-165l15.1 si:ch211-165l15.1 10 0.944 - - - - - 0.944 - - -
94. zgc:153642 ENSDARG00000052900 0 0.944 - - - - - 0.944 - - - zgc:153642 [Source:ZFIN;Acc:ZDB-GENE-061013-527]
95. si:ch211-202n12.2 ENSDARG00000096665 4 0.944 - - - - - 0.944 - - - si:ch211-202n12.2 [Source:ZFIN;Acc:ZDB-GENE-121214-12]
96. si:ch73-116o1.3 si:ch73-116o1.3 1 0.944 - - - - - 0.944 - - -
97. si:dkey-156m18.1 si:dkey-156m18.1 13 0.944 - - - - - 0.944 - - -
98. ENSDARG00000091446 ENSDARG00000091446 239 0.944 - - - - - 0.944 - - -
99. si:dkey-57a22.12 si:dkey-57a22.12 23 0.944 - - - - - 0.944 - - -
100. URB1_1 URB1_1 8 0.944 - - - - - 0.944 - - -

There are 634 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA