Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-147m20.1

Gene Name Gene ID Reads Annotation
si:ch211-147m20.1 si:ch211-147m20.1 6










Genes with expression patterns similar to si:ch211-147m20.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-147m20.1 si:ch211-147m20.1 6 5 1.000 - 1.000 1.000 - - - 1.000 1.000
2. tmem196b ENSDARG00000090140 20 1.673 0.818 - - - - - - - 0.855 transmembrane protein 196b [Source:ZFIN;Acc:ZDB-GENE-110914-248]
3. rccd1_1 ENSDARG00000071074 24 1.6 0.818 - - 0.782 - - - - - RCC1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3552]
4. nphs2 ENSDARG00000042850 31 1.579 - - - 0.757 - - - - 0.822 nephrosis 2, idiopathic, steroid-resistant (podocin) [Source:ZFIN;Acc:ZDB-GENE-051102-2]
5. ZNF337_19 ZNF337_19 3 1 - - - - - - - 1.000 -
6. si:ch73-176g19.2 si:ch73-176g19.2 2 1 - - - - - - - 1.000 -
7. CMAS CMAS 10 1 - - - - - - - 1.000 -
8. si:ch211-150h8.2 si:ch211-150h8.2 0 1 - - - - - - - 1.000 -
9. si:dkey-25o1.5 si:dkey-25o1.5 5 1 - - - 1.000 - - - - -
10. Metazoa_SRP_20 Metazoa_SRP_20 2 1 - - - - - - - 1.000 -
11. NMI 3 1 - - - - - - - 1.000 - N-myc (and STAT) interactor
12. fam198b ENSDARG00000077054 98 1 1.000 - - - - - - - - family with sequence similarity 198, member B [Source:ZFIN;Acc:ZDB-GENE-100105-1]
13. cpb1 ENSDARG00000045442, ENSDARG00000110762 22 1 - - - 1.000 - - - - - carboxypeptidase B1 (tissue) [Source:ZFIN;Acc:ZDB-GENE-030131-1132]
14. dhh ENSDARG00000037062 3 1 - - - 1.000 - - - - - desert hedgehog [Source:ZFIN;Acc:ZDB-GENE-990714-5]
15. C20H1orf95 C20H1orf95 12 1 - - - - - - - 1.000 -
16. si:dkey-14i17.1 si:dkey-14i17.1 1 1 - - - 1.000 - - - - -
17. si:ch211-59g22.1 si:ch211-59g22.1 0 1 - - - - - - - 1.000 -
18. cdkn1bb_1 ENSDARG00000054271 5 1 - - - 1.000 - - - - - cyclin-dependent kinase inhibitor 1Bb [Source:ZFIN;Acc:ZDB-GENE-030521-13]
19. si:dkey-14d8.7 ENSDARG00000045834 5 1 - - - - - - - 1.000 - si:dkey-14d8.7 [Source:ZFIN;Acc:ZDB-GENE-041210-143]
20. si:dkey-30h14.3 si:dkey-30h14.3 1 1 - - - 1.000 - - - - -
21. ddx41_1 2 1 - - - 1.000 - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 41
22. TOX4 TOX4 0 1 - - - - - - - 1.000 -
23. uts2a ENSDARG00000053854, ENSDARG00000116102 16 1 1.000 - - - - - - - - urotensin 2, alpha [Source:ZFIN;Acc:ZDB-GENE-040630-11]
24. ubald1a ENSDARG00000002362 181 1 - - - 1.000 - - - - - UBA-like domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-040718-191]
25. rfx3 ENSDARG00000014550 2 1 - - - 1.000 - - - - - regulatory factor X, 3 (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-061103-253]
26. hivep3a ENSDARG00000075928 17 1 1.000 - - - - - - - - human immunodeficiency virus type I enhancer binding protein 3a [Source:ZFIN;Acc:ZDB-GENE-081029-2]
27. PPP1R35 ENSDARG00000068916 94 1 1.000 - - - - - - - - protein phosphatase 1, regulatory subunit 35 [Source:ZFIN;Acc:ZDB-GENE-060825-232]
28. FMN1_1 FMN1_1 13 1 1.000 - - - - - - - -
29. CABZ01035647.1 CABZ01035647.1 5 1 - - - - - - - 1.000 -
30. ihhb ENSDARG00000058815 31 1 - - - - - - - 1.000 - Indian hedgehog homolog b [Source:ZFIN;Acc:ZDB-GENE-980526-135]
31. si:dkey-233h12.3 si:dkey-233h12.3 4 1 - - - 1.000 - - - - -
32. 5S_rRNA_16 5S_rRNA_16 10 1 - - - - - - - 1.000 -
33. si:dkey-115f9.2 si:dkey-115f9.2 18 1 - - - - - - - 1.000 -
34. vtg1 ENSDARG00000092233 1 1 - - - - - - - 1.000 - vitellogenin 1 [Source:ZFIN;Acc:ZDB-GENE-001201-1]
35. stoml3a ENSDARG00000079914 4 1 - - - - - - - 1.000 - stomatin (EPB72)-like 3a [Source:ZFIN;Acc:ZDB-GENE-070620-18]
36. C2 C2 5 1 - - - 1.000 - - - - -
37. manba_1 ENSDARG00000008238 8 1 - - - - - - - 1.000 - mannosidase, beta A, lysosomal [Source:ZFIN;Acc:ZDB-GENE-040426-721]
38. PEG3_19 PEG3_19 29 1 - - - - - - - 1.000 -
39. PEG3_31 PEG3_31 6 1 - - - - - - - 1.000 -
40. si:dkey-191j3.3 si:dkey-191j3.3 1987 1 1.000 - - - - - - - -
41. U1_3 U1_3 1 1 - - - 1.000 - - - - -
42. zgc:112234_7 ENSDARG00000099514, ENSDARG00000102806, ENSDARG00000104588, ENSDARG00000105340, ENSDARG00000105393, ENSDARG00000105414, ENSDARG00000105468, ENSDARG00000105483, ENSDARG00000105507, ENSDARG00000111934 1 1 - - - - - - - 1.000 - zgc:112234 [Source:NCBI gene;Acc:554097]
43. si:dkey-88e10.2 si:dkey-88e10.2 7 1 - - - - - - - 1.000 -
44. PEG3_25 PEG3_25 0 1 - - - - - - - 1.000 -
45. AL928852.1 AL928852.1 23 1 - - - 1.000 - - - - -
46. si:ch211-274k16.4 si:ch211-274k16.4 6 1 - - - - - - - 1.000 -
47. zgc:195175 ENSDARG00000069311, ENSDARG00000111510 1 1 - - - - - - - 1.000 - zgc:195175 [Source:ZFIN;Acc:ZDB-GENE-081022-191]
48. si:ch211-67f13.7 ENSDARG00000077845 8 1 - - - 1.000 - - - - - si:ch211-67f13.7 [Source:ZFIN;Acc:ZDB-GENE-090313-126]
49. gabrr1 ENSDARG00000043902 1 1 - - - 1.000 - - - - - gamma-aminobutyric acid (GABA) A receptor, rho 1 [Source:ZFIN;Acc:ZDB-GENE-040724-212]
50. TMEM55B TMEM55B 76 1 - - - 1.000 - - - - -
51. si:ch211-222m18.4 ENSDARG00000094425 7 1 - - - - - - - 1.000 - si:ch211-222m18.4 [Source:ZFIN;Acc:ZDB-GENE-050419-64]
52. si:dkey-234l24.9 si:dkey-234l24.9 8 1 1.000 - - - - - - - -
53. clrn1 ENSDARG00000102890 5 1 - - - 1.000 - - - - - clarin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-420]
54. CABZ01024686.1 CABZ01024686.1 1 1 - - - - - - - 1.000 -
55. ankrd34bb ENSDARG00000061641 23 1 - - - - - - - 1.000 - ankyrin repeat domain 34Bb [Source:ZFIN;Acc:ZDB-GENE-060526-101]
56. hcn3 ENSDARG00000027192 6 0.981 - - - 0.981 - - - - - hyperpolarization activated cyclic nucleotide-gated potassium channel 3 [Source:ZFIN;Acc:ZDB-GENE-060503-193]
57. BX323793.3 BX323793.3 7 0.976 - - - 0.976 - - - - -
58. MCOLN2 ENSDARG00000098918 12 0.968 - - - 0.968 - - - - - mucolipin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-692]
59. CABZ01117437.1 CABZ01117437.1 11 0.961 0.961 - - - - - - - -
60. ccdc147 ccdc147 39 0.959 - - - 0.959 - - - - -
61. nprl3 ENSDARG00000010918 339 0.957 0.957 - - - - - - - - NPR3-like, GATOR1 complex subunit [Source:ZFIN;Acc:ZDB-GENE-030131-1348]
62. U12 U12 14 0.941 - - - 0.941 - - - - -
63. si:dkey-276l13.5 si:dkey-276l13.5 3 0.941 - - - 0.941 - - - - -
64. si:dkey-45j10.2 si:dkey-45j10.2 5 0.939 - - - - - - - - 0.939
65. GSTK1 ENSDARG00000056510 14 0.939 - - - 0.939 - - - - - glutathione S-transferase kappa 1 [Source:ZFIN;Acc:ZDB-GENE-040718-298]
66. SEC14L1 ENSDARG00000101792 4 0.939 - - - - - - - - 0.939 SEC14 like lipid binding 1 [Source:HGNC Symbol;Acc:HGNC:10698]
67. kcnh3 ENSDARG00000069560 4 0.939 0.939 - - - - - - - - potassium voltage-gated channel, subfamily H (eag-related), member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-23]
68. mettl20 56 0.939 0.939 - - - - - - - - methyltransferase like 20
69. CR478286.1_1 CR478286.1_1 306 0.93 0.930 - - - - - - - -
70. HIST1H4L ENSDARG00000101249, ENSDARG00000105318, ENSDARG00000105352, ENSDARG00000105353, ENSDARG00000105376, ENSDARG00000105382, ENSDARG00000105409, ENSDARG00000105482, ENSDARG00000110035, ENSDARG00000110152, ENSDARG00000110812, ENSDARG00000111165, ENSDARG00000111247, ENSDARG00000111494, ENSDARG00000111501, ENSDARG00000111619, ENSDARG00000111753, ENSDARG00000112491, ENSDARG00000112528, ENSDARG00000112954, ENSDARG00000114534, ENSDARG00000115054, ENSDARG00000115281, ENSDARG00000115799, ENSDARG00000116781 3 0.929 - - - 0.929 - - - - - histone 1, H4, like [Source:ZFIN;Acc:ZDB-GENE-070927-10]
71. si:dkey-109j17.5 ENSDARG00000104891 2 0.928 - - - - - - - 0.928 - si:dkey-109j17.5 [Source:ZFIN;Acc:ZDB-GENE-090313-173]
72. arl4ab ENSDARG00000033182, ENSDARG00000110649 181 0.922 0.922 - - - - - - - - ADP-ribosylation factor-like 4ab [Source:ZFIN;Acc:ZDB-GENE-030219-167]
73. si:ch211-202m22.1 ENSDARG00000094491 24 0.921 - - - 0.921 - - - - - si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
74. si:dkey-284e7.2 si:dkey-284e7.2 14 0.918 - - - 0.918 - - - - -
75. si:ch73-257c13.2 ENSDARG00000074305 197 0.916 0.916 - - - - - - - - si:ch73-257c13.2 [Source:ZFIN;Acc:ZDB-GENE-081104-269]
76. lrrc4ba ENSDARG00000004597, ENSDARG00000112893 72 0.909 0.909 - - - - - - - - leucine rich repeat containing 4Ba [Source:ZFIN;Acc:ZDB-GENE-080327-25]
77. clcn1a ENSDARG00000062084 120 0.907 0.907 - - - - - - - - chloride channel, voltage-sensitive 1a [Source:ZFIN;Acc:ZDB-GENE-060503-333]
78. trim62 ENSDARG00000060901 12 0.903 - - - - - - - - 0.903 tripartite motif containing 62 [Source:ZFIN;Acc:ZDB-GENE-070112-502]
79. si:ch211-163b2.2 4 0.893 - - 0.893 - - - - - - si:ch211-163b2.2, transcript variant X1
80. wu:fb63a08 38 0.893 - - - - - - - 0.893 - wu:fb63a08
81. GBGT1_1 GBGT1_1 19 0.893 - - 0.893 - - - - - -
82. galca ENSDARG00000037064 12 0.891 - - - 0.891 - - - - - galactosylceramidase a [Source:ZFIN;Acc:ZDB-GENE-040724-243]
83. BX470154.1 ENSDARG00000097801 2 0.891 - - - 0.891 - - - - -
84. neu3.5 ENSDARG00000096368 5 0.889 - - - 0.889 - - - - - sialidase 3 (membrane sialidase), tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-071220-2]
85. CABZ01087514.1 ENSDARG00000090861 245 0.889 0.889 - - - - - - - - peroxisomal membrane protein PMP34-like [Source:NCBI gene;Acc:566378]
86. C23H1orf192 C23H1orf192 60 0.878 - - - 0.878 - - - - -
87. rgs8 ENSDARG00000070037, ENSDARG00000111478 37 0.876 - - - 0.876 - - - - - regulator of G protein signaling 8 [Source:ZFIN;Acc:ZDB-GENE-040718-264]
88. si:dkey-30f3.2 ENSDARG00000098087 6 0.875 - - - - - - - 0.875 - si:dkey-30f3.2 [Source:ZFIN;Acc:ZDB-GENE-110913-70]
89. INHBE INHBE 95 0.87 - - - 0.870 - - - - -
90. si:dkeyp-59a8.1 si:dkeyp-59a8.1 6 0.87 - - - - - - - - 0.870
91. BX005356.2 BX005356.2 2 0.87 - - - - - - - - 0.870
92. ZNF835 ZNF835 6 0.87 - - - - - - - - 0.870
93. MDH1B ENSDARG00000018008 29 0.869 - - - 0.869 - - - - - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
94. cfhl5 ENSDARG00000105052 25 0.868 - - - 0.868 - - - - - complement factor H like 5 [Source:ZFIN;Acc:ZDB-GENE-050208-782]
95. CT030712.1 ENSDARG00000044355 83 0.868 - - - - - - - 0.868 - uncharacterized LOC100534830 [Source:NCBI gene;Acc:100534830]
96. CABZ01025393.1 CABZ01025393.1 37 0.861 0.861 - - - - - - - -
97. bag5 ENSDARG00000017316 195 0.857 0.857 - - - - - - - - BCL2 associated athanogene 5 [Source:ZFIN;Acc:ZDB-GENE-050913-58]
98. GIPR ENSDARG00000025478 87 0.857 - - 0.857 - - - - - - gastric inhibitory polypeptide receptor [Source:ZFIN;Acc:ZDB-GENE-050516-4]
99. CU571170.2 CU571170.2 1 0.857 - - 0.857 - - - - - -
100. AC024175.21 AC024175.21 10 0.857 - - 0.857 - - - - - -

There are 315 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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