Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-13o20.1

Gene Name Gene ID Reads Annotation
si:ch211-13o20.1 si:ch211-13o20.1 30










Genes with expression patterns similar to si:ch211-13o20.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-13o20.1 si:ch211-13o20.1 30 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. pla2g15 ENSDARG00000103271 4 2 1.000 - - - - 1.000 - - - phospholipase A2, group XV [Source:ZFIN;Acc:ZDB-GENE-030131-6948]
3. valopb ENSDARG00000054181, ENSDARG00000110871 2 2 - - - 1.000 - 1.000 - - - vertebrate ancient long opsin b [Source:ZFIN;Acc:ZDB-GENE-040724-41]
4. TAF4_1 TAF4_1 30 2 1.000 - - - - 1.000 - - -
5. SNORD89 SNORD89 1 2 1.000 - - - - 1.000 - - -
6. gpr65 ENSDARG00000045957 4 1.997 - - - - 0.997 1.000 - - - G protein-coupled receptor 65 [Source:ZFIN;Acc:ZDB-GENE-120709-81]
7. tmem174 ENSDARG00000035388 2 1.976 - - - 0.976 - 1.000 - - - transmembrane protein 174 [Source:ZFIN;Acc:ZDB-GENE-080819-2]
8. rnf17 ENSDARG00000056387, ENSDARG00000113359 36 1.948 1.000 - - - - 0.948 - - - ring finger protein 17 [Source:ZFIN;Acc:ZDB-GENE-030131-6451]
9. si:dkey-21n8.3 si:dkey-21n8.3 5 1.943 1.000 - 0.943 - - - - - -
10. HIST1H4J_4 HIST1H4J_4 9 1.929 1.000 - 0.929 - - - - - -
11. CT573248.1 ENSDARG00000074029 10 1.925 - - - 1.000 - 0.925 - - -
12. si:dkey-217m5.3 si:dkey-217m5.3 22 1.923 1.000 - 0.923 - - - - - -
13. zgc:174698 ENSDARG00000075731, ENSDARG00000077266, ENSDARG00000098236 24 1.914 - - 0.914 - - 1.000 - - - zgc:174698 [Source:ZFIN;Acc:ZDB-GENE-080204-74]
14. c1qa ENSDARG00000044613, ENSDARG00000109639 35 1.904 0.915 - - - 0.989 - - - - complement component 1, q subcomponent, A chain [Source:ZFIN;Acc:ZDB-GENE-050522-86]
15. sult2st3 ENSDARG00000028367 79 1.892 1.000 - - - 0.892 - - - - sulfotransferase family 2, cytosolic sulfotransferase 3 [Source:ZFIN;Acc:ZDB-GENE-061117-4]
16. psmb9a ENSDARG00000000656 16 1.884 - - 0.898 - 0.986 - - - - proteasome subunit beta 9a [Source:ZFIN;Acc:ZDB-GENE-990415-140]
17. USH1G USH1G 25 1.86 - - 0.860 - - 1.000 - - -
18. fam163b ENSDARG00000073914 46 1.859 1.000 - - - - 0.859 - - - family with sequence similarity 163, member B [Source:ZFIN;Acc:ZDB-GENE-091204-96]
19. or115-14 ENSDARG00000094235 17 1.859 1.000 - - - - 0.859 - - - odorant receptor, family F, subfamily115, member 14 [Source:ZFIN;Acc:ZDB-GENE-010309-1]
20. ano2 ENSDARG00000101363 50 1.859 1.000 - 0.859 - - - - - - anoctamin 2 [Source:ZFIN;Acc:ZDB-GENE-060503-62]
21. trim35-3 ENSDARG00000052255 1 1.857 - - - - - 1.000 - 0.857 - tripartite motif containing 35-3 [Source:ZFIN;Acc:ZDB-GENE-070912-56]
22. LRRTM4 2 1.857 - - - - - 1.000 - 0.857 - leucine rich repeat transmembrane neuronal 4
23. rftn1a ENSDARG00000070831 5 1.857 1.000 - - - - - - 0.857 - raftlin, lipid raft linker 1a [Source:ZFIN;Acc:ZDB-GENE-060503-293]
24. tcf23 ENSDARG00000087381 6 1.85 - - - - - 1.000 0.850 - - transcription factor 23 [Source:ZFIN;Acc:ZDB-GENE-090806-5]
25. HYKK_1 HYKK_1 4 1.85 - - - - - 1.000 0.850 - -
26. CU915778.1 ENSDARG00000099025 40 1.85 - - - - - 1.000 0.850 - -
27. PLXNB2_1 PLXNB2_1 10 1.85 - - - - - 1.000 0.850 - -
28. ciita ENSDARG00000090851 5 1.85 1.000 - - - - - 0.850 - - class II, major histocompatibility complex, transactivator [Source:ZFIN;Acc:ZDB-GENE-071116-6]
29. ovca2 ENSDARG00000103748 38 1.85 1.000 - - - - - 0.850 - - OVCA2, serine hydrolase domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-115]
30. BX682552.2_1 BX682552.2_1 37 1.843 - - - - - 1.000 0.843 - -
31. BX571739.1 BX571739.1 45 1.832 1.000 - - - - 0.832 - - -
32. CR847543.1 ENSDARG00000086708 155 1.826 1.000 - - - - 0.826 - - -
33. irgq2 ENSDARG00000068657 4 1.826 1.000 - - - - 0.826 - - - immunity-related GTPase family, q2 [Source:ZFIN;Acc:ZDB-GENE-051212-7]
34. TMEM260 ENSDARG00000076362 63 1.824 1.000 - - - 0.824 - - - - transmembrane protein 260 [Source:ZFIN;Acc:ZDB-GENE-030131-4198]
35. FAM177A1 ENSDARG00000079636 19 1.814 1.000 - - - - - 0.814 - - family with sequence similarity 177, member A1 [Source:ZFIN;Acc:ZDB-GENE-070928-21]
36. si:ch211-117m22.2 si:ch211-117m22.2 60 1.809 1.000 - - - - 0.809 - - -
37. scxa ENSDARG00000035695 255 1.809 1.000 - 0.809 - - - - - - scleraxis bHLH transcription factor a [Source:ZFIN;Acc:ZDB-GENE-060503-414]
38. fermt3a fermt3a 56 1.806 1.000 - - - - - 0.806 - -
39. si:dkey-79c1.1 ENSDARG00000093179 11 1.796 - - - 0.796 - 1.000 - - - si:dkey-79c1.1 [Source:ZFIN;Acc:ZDB-GENE-060531-153]
40. slc10a4 ENSDARG00000009131 51 1.791 1.000 0.791 - - - - - - - solute carrier family 10, member 4 [Source:ZFIN;Acc:ZDB-GENE-041014-249]
41. si:dkey-229d11.5 ENSDARG00000094392 33 1.778 - - 0.778 - - 1.000 - - - si:dkey-229d11.5 [Source:ZFIN;Acc:ZDB-GENE-030131-5342]
42. cpeb1a ENSDARG00000045932 81 1.775 0.915 - - - - - 0.860 - - cytoplasmic polyadenylation element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-080723-42]
43. gcdhl gcdhl 38 1.771 - - - - - 1.000 0.771 - -
44. CABZ01080492.1 CABZ01080492.1 495 1.765 1.000 - - - - - 0.765 - -
45. dnd dnd 33 1.764 - - - - - 0.952 0.812 - -
46. BX927237.2 BX927237.2 16 1.764 - 0.764 - - - 1.000 - - -
47. exoc4 ENSDARG00000004336 32 1.751 - - - - 0.980 - 0.771 - - exocyst complex component 4 [Source:ZFIN;Acc:ZDB-GENE-041210-112]
48. zgc:193811 ENSDARG00000076745 72 1.742 - - 0.910 - - 0.832 - - - zgc:193811 [Source:ZFIN;Acc:ZDB-GENE-081022-43]
49. si:dkey-117p18.2 si:dkey-117p18.2 104 1.719 1.000 - - - - 0.719 - - -
50. slc13a5 slc13a5 15 1.708 - - - - - 1.000 0.708 - -
51. HIST1H2BA ENSDARG00000116654 10 1.707 - - - - - - 0.850 0.857 - histone cluster 1 H2B family member a [Source:HGNC Symbol;Acc:HGNC:18730]
52. ANKS1A ANKS1A 138 1.707 1.000 0.707 - - - - - - -
53. RNF14 ENSDARG00000043905 41 1.702 1.000 - - - - - 0.702 - - ring finger protein 14 [Source:ZFIN;Acc:ZDB-GENE-040625-65]
54. si:ch211-93e11.8 ENSDARG00000075022 5 1.67 - - - - - 0.859 - 0.811 - si:ch211-93e11.8 [Source:ZFIN;Acc:ZDB-GENE-121214-283]
55. adcy2a ENSDARG00000058392 13 1.667 - - - 0.904 - - - 0.763 - adenylate cyclase 2a [Source:ZFIN;Acc:ZDB-GENE-061109-1]
56. ccdc106 ccdc106 101 1.658 - 0.840 - - - 0.818 - - -
57. igf3 ENSDARG00000058058 19 1.634 - - - 0.808 - - 0.826 - - insulin-like growth factor 3 [Source:ZFIN;Acc:ZDB-GENE-080611-1]
58. ARG1 ENSDARG00000057429, ENSDARG00000110741 45 1.633 - - - - - 0.895 0.738 - - arginase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-181]
59. serpine3 ENSDARG00000057108 49 1.628 0.825 - - - - - 0.803 - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3 [Source:ZFIN;Acc:ZDB-GENE-050309-223]
60. rasal3 ENSDARG00000089933 17 1.597 - - - - - 0.826 0.771 - - RAS protein activator like 3 [Source:ZFIN;Acc:ZDB-GENE-101130-3]
61. BX511189.1 BX511189.1 34 1.596 0.746 - - - - - 0.850 - -
62. si:dkey-202b22.6 ENSDARG00000045552 190 1.591 - - 0.846 - - 0.745 - - - si:dkey-202b22.6 [Source:ZFIN;Acc:ZDB-GENE-041210-176]
63. pabpn1l ENSDARG00000087996, ENSDARG00000113382 40 1.574 - 0.719 - - - - 0.855 - - poly(A) binding protein, nuclear 1-like (cytoplasmic) [Source:ZFIN;Acc:ZDB-GENE-080709-5]
64. CR788231.1 CR788231.1 61 1.561 - - 0.711 - - - 0.850 - -
65. lrp2bp ENSDARG00000040478 21 1.56 - - - - - 0.710 0.850 - - LRP2 binding protein [Source:ZFIN;Acc:ZDB-GENE-070615-41]
66. chd 56 1.555 - - 0.836 - 0.719 - - - - chordin
67. zgc:174700 zgc:174700 35 1.552 - - - - - 0.811 0.741 - -
68. zgc:112332 ENSDARG00000058966, ENSDARG00000113930 126 1.535 0.703 - - - - 0.832 - - - zgc:112332 [Source:ZFIN;Acc:ZDB-GENE-050522-387]
69. CU104697.1 CU104697.1 19 1.529 - - - - - - 0.826 0.703 -
70. si:ch73-61d6.3 ENSDARG00000057826 274 1.52 - 0.755 - - - 0.765 - - - si:ch73-61d6.3 [Source:ZFIN;Acc:ZDB-GENE-091204-109]
71. mirlet7i 192 1.515 - - - - 0.727 - 0.788 - - microRNA let-7i
72. si:ch211-93g23.2 ENSDARG00000070558 105 1.497 0.705 - - - - - 0.792 - - si:ch211-93g23.2 [Source:ZFIN;Acc:ZDB-GENE-090312-164]
73. TTC9 ENSDARG00000074363 196 1.497 - - - - 0.781 - 0.716 - - tetratricopeptide repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20267]
74. afap1l1b ENSDARG00000056453 583 1.485 - 0.782 - - 0.703 - - - - actin filament associated protein 1-like 1b [Source:ZFIN;Acc:ZDB-GENE-061013-428]
75. si:dkeyp-68b7.6 si:dkeyp-68b7.6 7 1.464 0.746 - - - - 0.718 - - -
76. CR450814.1 ENSDARG00000096835 137 1.46 0.739 - - - - - 0.721 - -
77. pole2 ENSDARG00000100028 42 1.449 - - - - 0.742 - 0.707 - - polymerase (DNA directed), epsilon 2 [Source:ZFIN;Acc:ZDB-GENE-020419-16]
78. arhgap31 ENSDARG00000059472 23 1.447 - 0.729 - - - 0.718 - - - Rho GTPase activating protein 31 [Source:ZFIN;Acc:ZDB-GENE-100922-256]
79. camk4 ENSDARG00000005372 118 1.404 - 0.702 - - - - 0.702 - - calcium/calmodulin-dependent protein kinase IV [Source:ZFIN;Acc:ZDB-GENE-050417-76]
80. C25H11orf74 C25H11orf74 161 1 - - - - - 1.000 - - -
81. ZNF337_23 ZNF337_23 39 1 - - - - - 1.000 - - -
82. CABZ01023601.1 CABZ01023601.1 1 1 - - - - - 1.000 - - -
83. si:dkey-26g8.9 si:dkey-26g8.9 2 1 1.000 - - - - - - - -
84. cyp2k22 ENSDARG00000040433 13 1 - - - - - 1.000 - - - cytochrome P450, family 2, subfamily K, polypeptide 22 [Source:ZFIN;Acc:ZDB-GENE-040426-822]
85. CU694385.1 CU694385.1 1 1 1.000 - - - - - - - -
86. iqsec3b ENSDARG00000093091 10 1 - - - - - 1.000 - - - IQ motif and Sec7 domain 3b [Source:ZFIN;Acc:ZDB-GENE-050420-210]
87. arl8 ENSDARG00000094709 6 1 1.000 - - - - - - - - ADP-ribosylation factor-like 8 [Source:ZFIN;Acc:ZDB-GENE-030131-5762]
88. C3AR1 18 1 - - - - - 1.000 - - - C3a anaphylatoxin chemotactic receptor
89. BX537305.1 ENSDARG00000113834 10 1 - - - - - 1.000 - - -
90. mei4 ENSDARG00000043912 10 1 1.000 - - - - - - - - meiosis-specific, MEI4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040724-211]
91. slc6a6b ENSDARG00000098438 7 1 1.000 - - - - - - - - solute carrier family 6 (neurotransmitter transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030131-3077]
92. BX957353.1 BX957353.1 10 1 - - - - - 1.000 - - -
93. si:ch211-226h8.4 ENSDARG00000086221, ENSDARG00000113147 38 1 - - - - - 1.000 - - - si:ch211-226h8.4 [Source:ZFIN;Acc:ZDB-GENE-050208-376]
94. dpyda dpyda 12 1 - - - - - 1.000 - - -
95. ubxn10 ENSDARG00000052535 24 1 1.000 - - - - - - - - UBX domain protein 10 [Source:ZFIN;Acc:ZDB-GENE-060825-319]
96. AL935184.1 ENSDARG00000070039 1 1 1.000 - - - - - - - -
97. akt3a ENSDARG00000104810 21 1 - - - - - 1.000 - - - v-akt murine thymoma viral oncogene homolog 3a [Source:ZFIN;Acc:ZDB-GENE-050419-180]
98. FAM150A 14 1 1.000 - - - - - - - - family with sequence similarity 150 member A, transcript variant X2
99. CREM_1 CREM_1 9 1 1.000 - - - - - - - -
100. crygmxl1 ENSDARG00000018797 7 1 - - - - - 1.000 - - - crystallin, gamma MX, like 1 [Source:ZFIN;Acc:ZDB-GENE-050522-392]

There are 1179 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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