Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-13f8.1

Gene Name Gene ID Reads Annotation
si:ch211-13f8.1 ENSDARG00000093342 274 si:ch211-13f8.1 [Source:ZFIN;Acc:ZDB-GENE-061207-4]










Genes with expression patterns similar to si:ch211-13f8.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-13f8.1 ENSDARG00000093342 274 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-13f8.1 [Source:ZFIN;Acc:ZDB-GENE-061207-4]
2. brca2 ENSDARG00000079015 410 1.774 - 1.000 - - - 0.774 - - - breast cancer 2, early onset [Source:ZFIN;Acc:ZDB-GENE-060510-3]
3. hoxa5a ENSDARG00000102501 1667 1.727 0.727 1.000 - - - - - - - homeobox A5a [Source:ZFIN;Acc:ZDB-GENE-000823-9]
4. bambia ENSDARG00000055381 2922 1.72 - 0.966 - - - - 0.754 - - BMP and activin membrane-bound inhibitor (Xenopus laevis) homolog a [Source:ZFIN;Acc:ZDB-GENE-010416-1]
5. si:rp71-3c13.3 si:rp71-3c13.3 128 1.691 0.841 - - - - - 0.850 - -
6. tapbp tapbp 70 1.602 0.815 - - - - - 0.787 - -
7. otpb ENSDARG00000058379 1143 1.522 0.715 - - - - - 0.807 - - orthopedia homeobox b [Source:ZFIN;Acc:ZDB-GENE-990708-7]
8. hsdl1 ENSDARG00000041736 171 1.516 0.709 - - - - - 0.807 - - hydroxysteroid dehydrogenase like 1 [Source:ZFIN;Acc:ZDB-GENE-041212-31]
9. si:dkey-8k3.2 ENSDARG00000038424 285 1.505 0.710 - - - - - 0.795 - - si:dkey-8k3.2 [Source:ZFIN;Acc:ZDB-GENE-100922-98]
10. lsm1 ENSDARG00000043177 767 1 - 1.000 - - - - - - - LSM1, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-040801-68]
11. recql ENSDARG00000007175 501 1 - 1.000 - - - - - - - RecQ helicase-like [Source:ZFIN;Acc:ZDB-GENE-050809-134]
12. ms4a17a.7 ENSDARG00000043796 352 1 - 1.000 - - - - - - - membrane-spanning 4-domains, subfamily A, member 17A.7 [Source:ZFIN;Acc:ZDB-GENE-080829-2]
13. uqcrfs1 ENSDARG00000007745 4654 1 - 1.000 - - - - - - - ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2060]
14. zgc:110191 zgc:110191 359 1 - 1.000 - - - - - - -
15. rarga ENSDARG00000034117 1238 1 - 1.000 - - - - - - - retinoic acid receptor gamma a [Source:ZFIN;Acc:ZDB-GENE-980526-531]
16. ogfr ENSDARG00000037837 1001 1 - 1.000 - - - - - - - opioid growth factor receptor [Source:ZFIN;Acc:ZDB-GENE-030131-377]
17. glo1 ENSDARG00000068978 1384 1 - 1.000 - - - - - - - glyoxalase 1 [Source:ZFIN;Acc:ZDB-GENE-030722-9]
18. prkcea ENSDARG00000003008 1118 1 - 1.000 - - - - - - - protein kinase C, epsilon a [Source:ZFIN;Acc:ZDB-GENE-030131-8191]
19. RMDN2 ENSDARG00000078761 717 1 - 1.000 - - - - - - - regulator of microtubule dynamics 2 [Source:ZFIN;Acc:ZDB-GENE-111223-1]
20. CABZ01061717.1 CABZ01061717.1 320 1 - 1.000 - - - - - - -
21. sema3gb ENSDARG00000013607 1531 1 - 1.000 - - - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Gb [Source:ZFIN;Acc:ZDB-GENE-050513-4]
22. crabp2a ENSDARG00000073978 868 1 - 1.000 - - - - - - - cellular retinoic acid binding protein 2, a [Source:ZFIN;Acc:ZDB-GENE-020320-4]
23. si:ch211-251b21.1 ENSDARG00000007275 15724 1 - 1.000 - - - - - - - si:ch211-251b21.1 [Source:ZFIN;Acc:ZDB-GENE-060809-5]
24. tnfaip1 ENSDARG00000041565, ENSDARG00000113688, ENSDARG00000115018 553 1 - 1.000 - - - - - - - tumor necrosis factor, alpha-induced protein 1 (endothelial) [Source:ZFIN;Acc:ZDB-GENE-030131-5610]
25. hic1 ENSDARG00000055493 219 1 - 1.000 - - - - - - - hypermethylated in cancer 1 [Source:ZFIN;Acc:ZDB-GENE-040713-2]
26. SFT2D2_1 SFT2D2_1 219 1 - 1.000 - - - - - - -
27. lbx1a ENSDARG00000018321 634 1 - 1.000 - - - - - - - ladybird homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-040724-40]
28. stim1a ENSDARG00000060723 1200 0.999 - 0.999 - - - - - - - stromal interaction molecule 1a [Source:ZFIN;Acc:ZDB-GENE-060503-914]
29. anapc11 ENSDARG00000102531, ENSDARG00000116987 1769 0.999 - 0.999 - - - - - - - APC11 anaphase promoting complex subunit 11 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-061013-383]
30. klhl20 ENSDARG00000038801 936 0.999 - 0.999 - - - - - - - kelch-like family member 20 [Source:ZFIN;Acc:ZDB-GENE-040426-1935]
31. igf1rb ENSDARG00000034434, ENSDARG00000110935 813 0.999 - 0.999 - - - - - - - insulin-like growth factor 1b receptor [Source:ZFIN;Acc:ZDB-GENE-020503-2]
32. zgc:77158 ENSDARG00000013784 634 0.999 - 0.999 - - - - - - - zgc:77158 [Source:ZFIN;Acc:ZDB-GENE-040426-1799]
33. cnn3b ENSDARG00000029856 4807 0.999 - 0.999 - - - - - - - calponin 3, acidic b [Source:ZFIN;Acc:ZDB-GENE-050522-263]
34. ergic2 ENSDARG00000051936, ENSDARG00000111918 798 0.999 - 0.999 - - - - - - - ERGIC and golgi 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1331]
35. ceacam1 ENSDARG00000041119, ENSDARG00000111374 1763 0.999 - 0.999 - - - - - - - carcinoembryonic antigen-related cell adhesion molecule 1 [Source:ZFIN;Acc:ZDB-GENE-010724-14]
36. naa15b ENSDARG00000030368 535 0.999 - 0.999 - - - - - - - N(alpha)-acetyltransferase 15, NatA auxiliary subunit b [Source:ZFIN;Acc:ZDB-GENE-030131-6031]
37. pigp ENSDARG00000038805 611 0.999 - 0.999 - - - - - - - phosphatidylinositol glycan anchor biosynthesis, class P [Source:ZFIN;Acc:ZDB-GENE-030131-4041]
38. znf740 znf740 2458 0.999 - 0.999 - - - - - - -
39. tert ENSDARG00000042637 463 0.999 - 0.999 - - - - - - - telomerase reverse transcriptase [Source:ZFIN;Acc:ZDB-GENE-080405-1]
40. rab8b ENSDARG00000068628, ENSDARG00000111270, ENSDARG00000114110 607 0.999 - 0.999 - - - - - - - RAB8B, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-070620-16]
41. plp1a ENSDARG00000103732 3544 0.999 - 0.999 - - - - - - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
42. si:ch211-87l2.1 si:ch211-87l2.1 2403 0.999 - 0.999 - - - - - - -
43. cnot11 ENSDARG00000068596 829 0.999 - 0.999 - - - - - - - CCR4-NOT transcription complex, subunit 11 [Source:ZFIN;Acc:ZDB-GENE-030131-8068]
44. aes ENSDARG00000021805, ENSDARG00000115836 1533 0.999 - 0.999 - - - - - - - amino-terminal enhancer of split [Source:ZFIN;Acc:ZDB-GENE-040426-1409]
45. capn1a ENSDARG00000052702 1123 0.999 - 0.999 - - - - - - - calpain 1, (mu/I) large subunit a [Source:ZFIN;Acc:ZDB-GENE-040426-1263]
46. PPFIBP1_1 PPFIBP1_1 2256 0.998 - 0.998 - - - - - - -
47. fam192a ENSDARG00000041631 4113 0.998 - 0.998 - - - - - - - family with sequence similarity 192, member A [Source:ZFIN;Acc:ZDB-GENE-030131-6692]
48. cylda ENSDARG00000060058 768 0.998 - 0.998 - - - - - - - cylindromatosis (turban tumor syndrome), a [Source:ZFIN;Acc:ZDB-GENE-061108-2]
49. txndc9 ENSDARG00000069853, ENSDARG00000110688 1519 0.998 - 0.998 - - - - - - - thioredoxin domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-030131-8569]
50. arl2 ENSDARG00000069496, ENSDARG00000112191 1389 0.998 - 0.998 - - - - - - - ADP-ribosylation factor-like 2 [Source:ZFIN;Acc:ZDB-GENE-041010-19]
51. cdipt ENSDARG00000070686 1318 0.998 - 0.998 - - - - - - - CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase) [Source:ZFIN;Acc:ZDB-GENE-040426-2536]
52. myo9al1 myo9al1 1194 0.998 - 0.998 - - - - - - -
53. ap2b1 ENSDARG00000035152 2912 0.997 - 0.997 - - - - - - - adaptor related protein complex 2 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6564]
54. zeb2a ENSDARG00000062338, ENSDARG00000111349, ENSDARG00000115964 6087 0.997 - 0.997 - - - - - - - zinc finger E-box binding homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-070912-553]
55. ddr2l ENSDARG00000103830 1921 0.997 - 0.997 - - - - - - - discoidin domain receptor family, member 2, like [Source:ZFIN;Acc:ZDB-GENE-041210-162]
56. PRKAG2 PRKAG2 688 0.997 - 0.997 - - - - - - -
57. lix1l ENSDARG00000063244 2061 0.997 - 0.997 - - - - - - - limb and CNS expressed 1 like [Source:ZFIN;Acc:ZDB-GENE-060503-777]
58. ZNF70_11 ZNF70_11 1246 0.996 - 0.996 - - - - - - -
59. tmem181 ENSDARG00000045910 2288 0.996 - 0.996 - - - - - - - transmembrane protein 181 [Source:ZFIN;Acc:ZDB-GENE-060503-309]
60. ddx6 ENSDARG00000061338 2514 0.996 - 0.996 - - - - - - - DEAD (Asp-Glu-Ala-Asp) box helicase 6 [Source:ZFIN;Acc:ZDB-GENE-070912-83]
61. calm2b 3890 0.996 - 0.996 - - - - - - - calmodulin 2b, (phosphorylase kinase, delta)
62. ccng2 ENSDARG00000017602 3141 0.996 - 0.996 - - - - - - - cyclin G2 [Source:ZFIN;Acc:ZDB-GENE-021016-1]
63. mmp11b ENSDARG00000016718 1136 0.996 - 0.996 - - - - - - - matrix metallopeptidase 11b [Source:ZFIN;Acc:ZDB-GENE-070817-2]
64. arf6a ENSDARG00000101626 2959 0.996 - 0.996 - - - - - - - ADP-ribosylation factor 6a [Source:ZFIN;Acc:ZDB-GENE-030131-8007]
65. cenpe ENSDARG00000063385 4428 0.996 - 0.996 - - - - - - - centromere protein E [Source:ZFIN;Acc:ZDB-GENE-060929-860]
66. agtpbp1 ENSDARG00000105214 1038 0.996 - 0.996 - - - - - - - ATP/GTP binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-081104-267]
67. plagx ENSDARG00000036855 3768 0.995 - 0.995 - - - - - - - pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
68. abcb7 ENSDARG00000062795 1404 0.995 - 0.995 - - - - - - - ATP-binding cassette, sub-family B (MDR/TAP), member 7 [Source:ZFIN;Acc:ZDB-GENE-050517-10]
69. axin1 ENSDARG00000102964 1710 0.995 - 0.995 - - - - - - - axin 1 [Source:ZFIN;Acc:ZDB-GENE-000403-1]
70. FAM195A FAM195A 1134 0.994 - 0.994 - - - - - - -
71. tfe3a ENSDARG00000098903 1530 0.994 - 0.994 - - - - - - - transcription factor binding to IGHM enhancer 3a [Source:ZFIN;Acc:ZDB-GENE-010919-2]
72. AKAP2 AKAP2 4178 0.994 - 0.994 - - - - - - -
73. frem3 ENSDARG00000074677, ENSDARG00000111196, ENSDARG00000114207 2326 0.994 - 0.994 - - - - - - - Fras1 related extracellular matrix 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9788]
74. mrp63 mrp63 2500 0.994 - 0.994 - - - - - - -
75. hoxc3a ENSDARG00000070339 3379 0.993 - 0.993 - - - - - - - homeobox C3a [Source:ZFIN;Acc:ZDB-GENE-980526-532]
76. naa50 ENSDARG00000027825, ENSDARG00000116858 3221 0.993 - 0.993 - - - - - - - N(alpha)-acetyltransferase 50, NatE catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040801-142]
77. col4a1 ENSDARG00000055009 3083 0.992 - 0.992 - - - - - - - collagen, type IV, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-081105-114]
78. fam133b ENSDARG00000013863 5070 0.992 - 0.992 - - - - - - - family with sequence similarity 133, member B [Source:ZFIN;Acc:ZDB-GENE-060503-229]
79. fitm2 ENSDARG00000034568, ENSDARG00000112035 1717 0.992 - 0.992 - - - - - - - fat storage-inducing transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-050508-5]
80. serpinh1b ENSDARG00000019949 11693 0.992 - 0.992 - - - - - - - serpin peptidase inhibitor, clade H (heat shock protein 47), member 1b [Source:ZFIN;Acc:ZDB-GENE-990415-93]
81. dido1 ENSDARG00000057940 3819 0.992 - 0.992 - - - - - - - death inducer-obliterator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6117]
82. znf259 znf259 1819 0.992 - 0.992 - - - - - - -
83. MRPS36 ENSDARG00000079823, ENSDARG00000113427 3694 0.99 - 0.990 - - - - - - - mitochondrial ribosomal protein S36 [Source:ZFIN;Acc:ZDB-GENE-081104-343]
84. MAF1 ENSDARG00000013122 6899 0.989 - 0.989 - - - - - - - MAF1 homolog, negative regulator of RNA polymerase III [Source:ZFIN;Acc:ZDB-GENE-040426-2788]
85. eif5 ENSDARG00000003681 7986 0.989 - 0.989 - - - - - - - eukaryotic translation initiation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030131-975]
86. glrx5 ENSDARG00000043665 2687 0.988 - 0.988 - - - - - - - glutaredoxin 5 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1957]
87. thoc2 ENSDARG00000037503 8711 0.987 - 0.987 - - - - - - - THO complex 2 [Source:ZFIN;Acc:ZDB-GENE-030616-54]
88. npm1b ENSDARG00000037675 5448 0.987 - 0.987 - - - - - - - nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
89. hnrnpul1 ENSDARG00000040564 6550 0.986 - 0.986 - - - - - - - heterogeneous nuclear ribonucleoprotein U-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2432]
90. atl3 ENSDARG00000004270 2806 0.985 - 0.985 - - - - - - - atlastin 3 [Source:ZFIN;Acc:ZDB-GENE-041010-109]
91. eif4g2a ENSDARG00000020377, ENSDARG00000112658 6895 0.985 - 0.985 - - - - - - - eukaryotic translation initiation factor 4, gamma 2a [Source:ZFIN;Acc:ZDB-GENE-030131-2173]
92. rdh10b ENSDARG00000012369 980 0.984 - 0.984 - - - - - - - retinol dehydrogenase 10b [Source:ZFIN;Acc:ZDB-GENE-030909-7]
93. tra2a ENSDARG00000007863 4449 0.983 - 0.983 - - - - - - - transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391]
94. ca6 ENSDARG00000056499, ENSDARG00000110050 3236 0.982 - 0.982 - - - - - - - carbonic anhydrase VI [Source:ZFIN;Acc:ZDB-GENE-030131-7091]
95. ube2v1 ENSDARG00000041875 5739 0.982 - 0.982 - - - - - - - ubiquitin-conjugating enzyme E2 variant 1 [Source:ZFIN;Acc:ZDB-GENE-051030-102]
96. CYYR1 ENSDARG00000103783 4107 0.982 - 0.982 - - - - - - - cysteine/tyrosine-rich 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2356]
97. dab2 ENSDARG00000031761 2000 0.982 - 0.982 - - - - - - - Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040303-1]
98. eif5b ENSDARG00000016548 3972 0.979 - 0.979 - - - - - - - eukaryotic translation initiation factor 5B [Source:ZFIN;Acc:ZDB-GENE-050208-20]
99. csnk1a1_1 ENSDARG00000052674, ENSDARG00000112077 5195 0.979 - 0.979 - - - - - - - casein kinase 1, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-020419-19]
100. ywhaqa ENSDARG00000042539 7034 0.979 - 0.979 - - - - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide a [Source:ZFIN;Acc:ZDB-GENE-040122-5]

There are 860 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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