Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-139n6.3

Gene Name Gene ID Reads Annotation
si:ch211-139n6.3 ENSDARG00000093230 147 si:ch211-139n6.3 [Source:ZFIN;Acc:ZDB-GENE-041111-114]










Genes with expression patterns similar to si:ch211-139n6.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-139n6.3 ENSDARG00000093230 147 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-139n6.3 [Source:ZFIN;Acc:ZDB-GENE-041111-114]
2. CR759791.3 CR759791.3 134 2.49 - - - - - 0.964 0.716 0.810 -
3. tgm1l4 ENSDARG00000101407 800 1.839 0.892 - - - - 0.947 - - - transglutaminase 1 like 4 [Source:ZFIN;Acc:ZDB-GENE-050913-29]
4. tpk1 ENSDARG00000038040, ENSDARG00000114161 334 1.817 - 0.875 - - - 0.942 - - - thiamin pyrophosphokinase 1 [Source:ZFIN;Acc:ZDB-GENE-041010-176]
5. GRB7 ENSDARG00000042726 100 1.802 - 0.898 - - - 0.904 - - - growth factor receptor bound protein 7 [Source:ZFIN;Acc:ZDB-GENE-091118-23]
6. dhrs13a.2 ENSDARG00000111240 491 1.797 - - - - - 0.949 - 0.848 - dehydrogenase/reductase (SDR family) member 13a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040912-69]
7. CCDC64B CCDC64B 337 1.784 0.823 - - - - 0.961 - - -
8. etnk2 ENSDARG00000070213, ENSDARG00000110347 736 1.771 - 0.801 - - - 0.970 - - - ethanolamine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-135]
9. si:dkey-57h18.2 33 1.767 - - 0.802 - - 0.965 - - - si:dkey-57h18.2, transcript variant X1
10. mogat3b ENSDARG00000003635 394 1.75 - - - - - 0.941 - 0.809 - monoacylglycerol O-acyltransferase 3b [Source:ZFIN;Acc:ZDB-GENE-110302-2]
11. C24H18orf8 C24H18orf8 87 1.745 - 0.923 - - - - - 0.822 -
12. noxo1b ENSDARG00000056374 78 1.742 - 0.968 - - - - 0.774 - - NADPH oxidase organizer 1b [Source:ZFIN;Acc:ZDB-GENE-101203-1]
13. si:dkey-240e12.6 ENSDARG00000110137 674 1.736 - - - - - 0.971 - 0.765 - si:dkey-240e12.6 [Source:ZFIN;Acc:ZDB-GENE-050208-367]
14. si:dkey-92i15.4 ENSDARG00000078387 428 1.734 - - - - - 0.965 - 0.769 - si:dkey-92i15.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8422]
15. grp ENSDARG00000043074 747 1.73 - 0.762 - - - 0.968 - - - gastrin-releasing peptide [Source:ZFIN;Acc:ZDB-GENE-060526-117]
16. cmasb 499 1.725 - - - - - 0.897 - 0.828 - cytidine monophosphate N-acetylneuraminic acid synthetase b
17. cldnf ENSDARG00000043133 1006 1.713 - - - - - 0.957 0.756 - - claudin f [Source:ZFIN;Acc:ZDB-GENE-010328-6]
18. FP236334.1 FP236334.1 345 1.711 - 0.758 - - - 0.953 - - -
19. actr8 ENSDARG00000103610 367 1.696 - - - - - 0.942 0.754 - - ARP8 actin related protein 8 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-5065]
20. ankrd39 ENSDARG00000041350 73 1.695 - 0.731 - - - 0.964 - - - ankyrin repeat domain 39 [Source:ZFIN;Acc:ZDB-GENE-081104-153]
21. slco2a1 ENSDARG00000061896 58 1.695 - 0.726 - - - 0.969 - - - solute carrier organic anion transporter family, member 2A1 [Source:ZFIN;Acc:ZDB-GENE-060606-3]
22. MKL2_1 MKL2_1 292 1.679 0.974 0.705 - - - - - - -
23. rpain ENSDARG00000063021 186 1.671 - 0.830 - - - - - 0.841 - RPA interacting protein [Source:ZFIN;Acc:ZDB-GENE-060825-212]
24. sema6d ENSDARG00000002748 133 1.671 - 0.712 - - - 0.959 - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D [Source:ZFIN;Acc:ZDB-GENE-040426-1933]
25. clk4b ENSDARG00000005908 915 1.67 - 0.758 - - - 0.912 - - - CDC-like kinase 4b [Source:ZFIN;Acc:ZDB-GENE-050227-19]
26. acap1 ENSDARG00000056346, ENSDARG00000109603 274 1.648 - 0.888 - - - - - 0.760 - ArfGAP with coiled-coil, ankyrin repeat and PH domains 1 [Source:ZFIN;Acc:ZDB-GENE-070112-1242]
27. SMIM22 ENSDARG00000105068 246 1.643 - 0.820 - - - - - 0.823 - small integral membrane protein 22 [Source:HGNC Symbol;Acc:HGNC:48329]
28. tmem180 tmem180 430 1.634 - - - - - 0.898 0.736 - -
29. rhov ENSDARG00000070434 808 1.629 - - - - - - 0.828 0.801 - ras homolog family member V [Source:ZFIN;Acc:ZDB-GENE-031002-10]
30. SH3D21 ENSDARG00000099448 1726 1.628 - - - - - 0.921 - 0.707 - SH3 domain containing 21 [Source:ZFIN;Acc:ZDB-GENE-051120-57]
31. ms4a17a.2 ENSDARG00000105674 32 1.617 - 0.773 - - - - - 0.844 - membrane-spanning 4-domains, subfamily A, member 17a.2 [Source:ZFIN;Acc:ZDB-GENE-070705-367]
32. trpc5b ENSDARG00000060837, ENSDARG00000114021 15 1.613 - 0.758 0.855 - - - - - - transient receptor potential cation channel, subfamily C, member 5b [Source:ZFIN;Acc:ZDB-GENE-091112-24]
33. tmem45b ENSDARG00000056239 2395 1.612 - - - - - 0.818 - 0.794 - transmembrane protein 45B [Source:ZFIN;Acc:ZDB-GENE-040426-1904]
34. nfkbiaa ENSDARG00000005481 948 1.601 - - - - - 0.834 - 0.767 - nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a [Source:ZFIN;Acc:ZDB-GENE-040426-2227]
35. eif4e2rs1 ENSDARG00000015835 589 1.598 - 0.708 - - - 0.890 - - - eukaryotic translation initiation factor 4E family member 2 related sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1728]
36. tmem79b ENSDARG00000076861 154 1.581 - 0.783 - - - - - 0.798 - transmembrane protein 79b [Source:ZFIN;Acc:ZDB-GENE-120807-1]
37. golga2 ENSDARG00000063197 30 1.573 - - - - 0.735 - - 0.838 - golgin A2 [Source:ZFIN;Acc:ZDB-GENE-081030-1]
38. msxd msxd 1750 1.571 - - - - - 0.761 0.810 - -
39. s100z ENSDARG00000038729 442 1.569 - 0.729 - - - 0.840 - - - S100 calcium binding protein Z [Source:ZFIN;Acc:ZDB-GENE-050522-69]
40. ube2l3b ENSDARG00000027141 26 1.561 - 0.758 0.803 - - - - - - ubiquitin-conjugating enzyme E2L 3b [Source:ZFIN;Acc:ZDB-GENE-030131-662]
41. tmem144a ENSDARG00000037409, ENSDARG00000110998, ENSDARG00000112588, ENSDARG00000116960 64 1.555 0.719 - - - - - - 0.836 - transmembrane protein 144a [Source:ZFIN;Acc:ZDB-GENE-040822-12]
42. si:dkey-4c15.13 ENSDARG00000095704 13 1.55 0.734 - - - 0.816 - - - - si:dkey-4c15.13 [Source:ZFIN;Acc:ZDB-GENE-030131-2023]
43. tmed3 ENSDARG00000028816, ENSDARG00000113132 1686 1.549 - - - - - 0.841 - 0.708 - transmembrane p24 trafficking protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8335]
44. gnai2b ENSDARG00000017294 686 1.536 - - - - - 0.739 - 0.797 - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5861]
45. C9H3orf38 C9H3orf38 83 1.533 - 0.700 - - - - - 0.833 -
46. NFAT5 NFAT5 62 1.531 - 0.791 0.740 - - - - - -
47. si:dkey-193b15.6 si:dkey-193b15.6 1340 1.526 - - - - - 0.797 0.729 - -
48. ENSDARG00000076021 ENSDARG00000076021 162 1.524 - 0.790 - - - - 0.734 - -
49. lygl1 ENSDARG00000056874 309 1.523 - 0.766 - - - - - 0.757 - lysozyme g-like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-461]
50. ppl ENSDARG00000101043 9196 1.513 - - - - - 0.806 - 0.707 - periplakin [Source:ZFIN;Acc:ZDB-GENE-041008-196]
51. MARVELD3 ENSDARG00000099654 325 1.511 - 0.801 - - - - - 0.710 - MARVEL domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1641]
52. lama5 ENSDARG00000058543 2782 1.49 - - - - - 0.723 - 0.767 - laminin, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9823]
53. LYRM9 ENSDARG00000075528 329 1.467 - 0.717 - - - - - 0.750 - LYR motif containing 9 [Source:ZFIN;Acc:ZDB-GENE-081022-28]
54. si:dkey-163m14.2 274 1.453 - 0.729 - - - - - 0.724 - si:dkey-163m14.2
55. zgc:174917 ENSDARG00000073820 6 0.983 - 0.983 - - - - - - - zgc:174917 [Source:ZFIN;Acc:ZDB-GENE-070928-42]
56. itga11b ENSDARG00000007950 17 0.983 - 0.983 - - - - - - - integrin, alpha 11b [Source:ZFIN;Acc:ZDB-GENE-071009-4]
57. si:ch73-74h11.1 ENSDARG00000062750 158 0.976 - 0.976 - - - - - - - si:ch73-74h11.1 [Source:ZFIN;Acc:ZDB-GENE-091204-215]
58. AC024175.9 AC024175.9 56 0.97 - - - - - 0.970 - - -
59. myh14 ENSDARG00000073732 502 0.97 - - - - - 0.970 - - - myosin, heavy chain 14, non-muscle [Source:ZFIN;Acc:ZDB-GENE-100921-1]
60. tefb ENSDARG00000098103 370 0.97 - - - - - 0.970 - - - thyrotrophic embryonic factor b [Source:ZFIN;Acc:ZDB-GENE-050522-224]
61. sc:d0139 sc:d0139 233 0.97 - - - - - 0.970 - - -
62. dbnla ENSDARG00000008170 2129 0.969 - - - - - 0.969 - - - drebrin-like a [Source:ZFIN;Acc:ZDB-GENE-040704-42]
63. kmt2e ENSDARG00000007523 1851 0.969 - - - - - 0.969 - - - lysine (K)-specific methyltransferase 2E [Source:ZFIN;Acc:ZDB-GENE-030131-4120]
64. znf750 ENSDARG00000102267 327 0.967 - - - - - 0.967 - - - zinc finger protein 750 [Source:ZFIN;Acc:ZDB-GENE-050417-313]
65. si:ch211-207c6.14 si:ch211-207c6.14 19 0.967 - - - - - 0.967 - - -
66. CU929417.2 CU929417.2 94 0.967 - - - - - 0.967 - - -
67. TDRD15 TDRD15 46 0.967 - - - - - 0.967 - - -
68. klhl11 ENSDARG00000045130 800 0.967 - - - - - 0.967 - - - kelch-like family member 11 [Source:ZFIN;Acc:ZDB-GENE-030131-5524]
69. pcgf5b ENSDARG00000052388 163 0.966 - - - - - 0.966 - - - polycomb group ring finger 5b [Source:ZFIN;Acc:ZDB-GENE-060512-34]
70. crybb3 ENSDARG00000041301 48 0.966 - - - - - 0.966 - - - crystallin, beta B3 [Source:ZFIN;Acc:ZDB-GENE-060130-2]
71. CU302436.3 CU302436.3 174 0.966 - - - - - 0.966 - - -
72. CU929328.1 ENSDARG00000105332 31 0.966 - - - - - 0.966 - - -
73. mif ENSDARG00000071336 1328 0.965 - - - - - 0.965 - - - macrophage migration inhibitory factor [Source:ZFIN;Acc:ZDB-GENE-080708-1]
74. tmem53 ENSDARG00000038789 411 0.965 - - - - - 0.965 - - - transmembrane protein 53 [Source:ZFIN;Acc:ZDB-GENE-040718-384]
75. rhoab ENSDARG00000094673 26 0.965 - - - - - 0.965 - - - ras homolog gene family, member Ab [Source:ZFIN;Acc:ZDB-GENE-040322-2]
76. egr3 ENSDARG00000089156 71 0.965 - - - - - 0.965 - - - early growth response 3 [Source:ZFIN;Acc:ZDB-GENE-040718-394]
77. si:dkey-115f9.2 si:dkey-115f9.2 18 0.965 - - - - - 0.965 - - -
78. ccdc173 ENSDARG00000077928 260 0.965 - - - - - 0.965 - - - coiled-coil domain containing 173 [Source:ZFIN;Acc:ZDB-GENE-081104-457]
79. CIR1 ENSDARG00000099733 66 0.965 - - - - - 0.965 - - - corepressor interacting with RBPJ, 1 [Source:HGNC Symbol;Acc:HGNC:24217]
80. snw1 ENSDARG00000091563 263 0.965 - - - - - 0.965 - - - SNW domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-571]
81. CR759816.1 ENSDARG00000098977 27 0.965 - - - - - 0.965 - - -
82. slc6a19b ENSDARG00000056719 140 0.965 - - - - - 0.965 - - - solute carrier family 6 (neutral amino acid transporter), member 19b [Source:ZFIN;Acc:ZDB-GENE-030131-4755]
83. bace2 ENSDARG00000044781 17 0.965 - - - - - 0.965 - - - beta-secretase 2 [Source:ZFIN;Acc:ZDB-GENE-041010-68]
84. zgc:110286 92 0.964 - - - - - 0.964 - - - zgc:110286
85. sh3d19_1 ENSDARG00000088202, ENSDARG00000114126, ENSDARG00000117115 90 0.964 - - - - - 0.964 - - - SH3 domain containing 19 [Source:ZFIN;Acc:ZDB-GENE-050522-481]
86. si:dkey-117n7.5 ENSDARG00000089640 452 0.964 - - - - - 0.964 - - - si:dkey-117n7.5 [Source:ZFIN;Acc:ZDB-GENE-060503-331]
87. akr1a1b ENSDARG00000052030, ENSDARG00000112549 2505 0.964 - - - - - 0.964 - - - aldo-keto reductase family 1, member A1b (aldehyde reductase) [Source:ZFIN;Acc:ZDB-GENE-050417-118]
88. zbtb46 ENSDARG00000078191, ENSDARG00000113888 231 0.964 - - - - - 0.964 - - - zinc finger and BTB domain containing 46 [Source:ZFIN;Acc:ZDB-GENE-090313-352]
89. slc9a6a ENSDARG00000009209, ENSDARG00000111329 184 0.964 - - - - - 0.964 - - - solute carrier family 9, subfamily A (NHE6, cation proton antiporter 6), member 6a [Source:ZFIN;Acc:ZDB-GENE-070424-104]
90. traf2b ENSDARG00000101036 429 0.964 - - - - - 0.964 - - - Tnf receptor-associated factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5345]
91. ube2j1 ENSDARG00000033489 497 0.964 - - - - - 0.964 - - - ubiquitin-conjugating enzyme E2, J1 [Source:ZFIN;Acc:ZDB-GENE-040426-2853]
92. tmem192 ENSDARG00000037484, ENSDARG00000116740 269 0.964 - - - - - 0.964 - - - transmembrane protein 192 [Source:ZFIN;Acc:ZDB-GENE-040426-2254]
93. tph2 ENSDARG00000057239, ENSDARG00000109777 55 0.964 - - - - - 0.964 - - - tryptophan hydroxylase 2 (tryptophan 5-monooxygenase) [Source:ZFIN;Acc:ZDB-GENE-040624-4]
94. sowahcb ENSDARG00000059582 178 0.964 - - - - - 0.964 - - - sosondowah ankyrin repeat domain family Cb [Source:ZFIN;Acc:ZDB-GENE-061215-96]
95. FYCO1 FYCO1 194 0.963 - - - - - 0.963 - - -
96. igf3 ENSDARG00000058058 19 0.963 - 0.963 - - - - - - - insulin-like growth factor 3 [Source:ZFIN;Acc:ZDB-GENE-080611-1]
97. CCNDBP1 ENSDARG00000039328 486 0.963 - - - - - 0.963 - - - cyclin D-type binding-protein 1 [Source:ZFIN;Acc:ZDB-GENE-070410-17]
98. CABZ01072083.1 CABZ01072083.1 56 0.962 - - - - - 0.962 - - -
99. foxo1b ENSDARG00000061549 790 0.962 - - - - - 0.962 - - - forkhead box O1 b [Source:ZFIN;Acc:ZDB-GENE-080425-3]
100. sez6a ENSDARG00000100876 35 0.962 - - - - - 0.962 - - - seizure related 6 homolog a [Source:ZFIN;Acc:ZDB-GENE-030131-8208]

There are 1386 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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