Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-138k19.2

Gene Name Gene ID Reads Annotation
si:ch211-138k19.2 si:ch211-138k19.2 398










Genes with expression patterns similar to si:ch211-138k19.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-138k19.2 si:ch211-138k19.2 398 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. gbx1 ENSDARG00000071418 871 2.82 - 0.909 - - - 1.000 0.911 - - gastrulation brain homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-020117-2]
3. TUBB2A TUBB2A 142 2.686 0.844 1.000 - - - - 0.842 - -
4. calb1 ENSDARG00000031598 252 2.679 0.866 1.000 - - - - 0.813 - - calbindin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8107]
5. cacng3b ENSDARG00000076401 91 2.675 0.760 1.000 - - - - 0.915 - - calcium channel, voltage-dependent, gamma subunit 3b [Source:ZFIN;Acc:ZDB-GENE-090828-1]
6. GJD2_1 GJD2_1 3045 2.671 0.794 1.000 - - - - 0.877 - -
7. FUT9 FUT9 91 2.662 0.735 1.000 - - - - 0.927 - -
8. scn2b ENSDARG00000101713 796 2.634 0.742 0.909 - - - - 0.983 - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
9. syt11a ENSDARG00000057913 1145 2.604 0.754 0.902 - - - - 0.948 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
10. nrxn2a ENSDARG00000061454 291 2.529 0.844 0.881 - - - - 0.804 - - neurexin 2a [Source:ZFIN;Acc:ZDB-GENE-070206-5]
11. MAP1A MAP1A 847 2.518 0.801 0.811 - - - - 0.906 - -
12. CABZ01084273.1 CABZ01084273.1 16 2.501 0.735 1.000 - - - - 0.766 - -
13. stx1b ENSDARG00000000503 2724 2.496 0.707 0.814 - - - - 0.975 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
14. slc1a2b ENSDARG00000102453 3136 2.483 0.726 0.829 - - - - 0.928 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
15. LRRN3 LRRN3 261 2.481 0.741 0.752 - - - - 0.988 - -
16. jagn1a ENSDARG00000041071, ENSDARG00000109427 397 2.476 0.810 0.763 - - - - 0.903 - - jagunal homolog 1a [Source:ZFIN;Acc:ZDB-GENE-041010-80]
17. si:ch211-152f6.6 si:ch211-152f6.6 278 2.471 0.711 0.946 - - - - 0.814 - -
18. pcsk1nl ENSDARG00000076170 1232 2.458 0.724 0.745 - - - - 0.989 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
19. scn8aa ENSDARG00000005775 792 2.44 0.800 0.754 - - - - 0.886 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
20. syt4 ENSDARG00000036505 421 2.385 0.752 0.815 - - - - 0.818 - - synaptotagmin IV [Source:ZFIN;Acc:ZDB-GENE-030131-7297]
21. stmn2a ENSDARG00000033234 2272 2.385 0.740 0.702 - - - - 0.943 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
22. her4.2 ENSDARG00000056729, ENSDARG00000094426 289 2.257 - 0.704 - - 0.720 - 0.833 - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
23. neflb ENSDARG00000012426 298 1.995 - 1.000 - - - - 0.995 - - neurofilament, light polypeptide b [Source:ZFIN;Acc:ZDB-GENE-060312-44]
24. clvs2 ENSDARG00000053122 1390 1.962 - - - - - 0.996 0.966 - - clavesin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-313]
25. trim46b ENSDARG00000058649 54 1.944 - 1.000 - - - - 0.944 - - tripartite motif containing 46b [Source:ZFIN;Acc:ZDB-GENE-060503-466]
26. CABZ01070258.1 ENSDARG00000105687 3643 1.939 - - - - - 0.988 0.951 - -
27. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 1.937 - 1.000 - - - - 0.937 - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
28. si:dkeyp-35e5.1 si:dkeyp-35e5.1 12 1.93 - 1.000 - - - - 0.930 - -
29. jph3 ENSDARG00000102204 175 1.924 - 1.000 - - - - 0.924 - - junctophilin 3 [Source:ZFIN;Acc:ZDB-GENE-060503-415]
30. pcp4a ENSDARG00000053130 1024 1.921 - - - - - 0.991 0.930 - - Purkinje cell protein 4a [Source:ZFIN;Acc:ZDB-GENE-031118-105]
31. gng3 ENSDARG00000009553 2530 1.906 - 0.929 - - - - 0.977 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
32. NTRK3 NTRK3 163 1.904 - 1.000 - - - - 0.904 - -
33. MAP6 MAP6 643 1.901 - 0.927 - - - - 0.974 - -
34. fam219ab ENSDARG00000013813 591 1.901 - 1.000 - - - - 0.901 - - family with sequence similarity 219, member Ab [Source:ZFIN;Acc:ZDB-GENE-050522-213]
35. sez6l2 ENSDARG00000076052 360 1.884 - 0.907 - - - - 0.977 - - seizure related 6 homolog (mouse)-like 2 [Source:ZFIN;Acc:ZDB-GENE-091204-189]
36. slc17a6b ENSDARG00000041150 823 1.879 - 1.000 - - - - 0.879 - - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
37. SV2B SV2B 208 1.877 - 0.909 - - - - 0.968 - -
38. ankrd37 ENSDARG00000056376 131 1.87 0.870 1.000 - - - - - - - ankyrin repeat domain 37 [Source:ZFIN;Acc:ZDB-GENE-070308-1]
39. slc17a6a ENSDARG00000001127 337 1.868 - 1.000 - - - - 0.868 - - solute carrier family 17 (vesicular glutamate transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-050105-4]
40. rap2ip rap2ip 681 1.865 - 0.907 - - - - 0.958 - -
41. lingo1a ENSDARG00000034165 179 1.852 - 1.000 - - - - 0.852 - - leucine rich repeat and Ig domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-080327-16]
42. amph ENSDARG00000007663 599 1.841 - 0.909 - - - - 0.932 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
43. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 1.834 0.861 - - - - - 0.973 - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
44. nptx1l ENSDARG00000074671 569 1.832 - 0.918 - - - - 0.914 - - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
45. NELL2A ENSDARG00000090690 840 1.827 0.867 - - - - - 0.960 - - neural EGFL like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7972]
46. lhx1a ENSDARG00000014018 958 1.826 - 0.903 - - - - 0.923 - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
47. HSPA4L ENSDARG00000053544 363 1.823 - 0.826 - - - - 0.997 - - heat shock protein 4 like [Source:ZFIN;Acc:ZDB-GENE-030131-2412]
48. SKOR2 SKOR2 1041 1.802 0.876 - - - - - 0.926 - -
49. GLRA3 ENSDARG00000011066 242 1.801 - 0.814 - - - - 0.987 - - glycine receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-020402-1]
50. nkx1.2lb ENSDARG00000099427 220 1.799 - 0.881 - - - - 0.918 - - NK1 transcription factor related 2-like,b [Source:ZFIN;Acc:ZDB-GENE-040615-2]
51. scg5 ENSDARG00000032126, ENSDARG00000077045 29 1.794 0.794 1.000 - - - - - - - secretogranin V [Source:ZFIN;Acc:ZDB-GENE-040426-1687]
52. sv2bb ENSDARG00000060711 196 1.791 - 0.822 - - - - 0.969 - - synaptic vesicle glycoprotein 2Bb [Source:ZFIN;Acc:ZDB-GENE-030131-2789]
53. scrt2 ENSDARG00000056175 4331 1.79 - 0.895 - - - - 0.895 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
54. FAM196A 82 1.786 - 0.901 - - - - 0.885 - - family with sequence similarity 196 member A
55. KCNAB2 KCNAB2 129 1.784 0.784 1.000 - - - - - - -
56. st6gal1 ENSDARG00000044514 142 1.783 0.829 - - - - - 0.954 - - ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 [Source:ZFIN;Acc:ZDB-GENE-060322-3]
57. rbfox3 rbfox3 1443 1.775 - 0.833 - - - - 0.942 - -
58. CR407704.1 CR407704.1 188 1.77 0.794 - - - - - 0.976 - -
59. snap25a ENSDARG00000020609 4537 1.769 - 0.811 - - - - 0.958 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
60. sncgb ENSDARG00000109715 1014 1.769 0.808 - - - - - 0.961 - - synuclein, gamma b (breast cancer-specific protein 1) [Source:ZFIN;Acc:ZDB-GENE-050522-235]
61. dbx2 2971 1.768 - 0.781 - - - - 0.987 - - developing brain homeobox 2
62. ksr2 ENSDARG00000094526 134 1.768 - 0.901 - - - - 0.867 - - kinase suppressor of ras 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8047]
63. arl11l arl11l 31 1.766 - 1.000 - - - - 0.766 - -
64. her3 ENSDARG00000076857 131 1.766 - 1.000 - - - - 0.766 - - hairy-related 3 [Source:ZFIN;Acc:ZDB-GENE-980526-204]
65. prdm14 ENSDARG00000045371 106 1.766 - 1.000 - - - - 0.766 - - PR domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-030131-2709]
66. si:dkey-122c11.4 si:dkey-122c11.4 13 1.766 - 1.000 - - - - 0.766 - -
67. rbfox3l rbfox3l 34 1.766 - 1.000 - - - - 0.766 - -
68. C10H5orf63 C10H5orf63 17 1.766 - 1.000 - - - - 0.766 - -
69. nebl ENSDARG00000021200 40 1.766 - 1.000 - - - - 0.766 - - nebulette [Source:ZFIN;Acc:ZDB-GENE-050320-151]
70. CABZ01066439.2 CABZ01066439.2 5 1.766 - 1.000 - - - - 0.766 - -
71. tecrl2 tecrl2 11 1.766 - 1.000 - - - - 0.766 - -
72. fam163b ENSDARG00000073914 46 1.766 - 1.000 - - - - 0.766 - - family with sequence similarity 163, member B [Source:ZFIN;Acc:ZDB-GENE-091204-96]
73. TUBB8P7_1 TUBB8P7_1 2722 1.758 0.768 - - - - - 0.990 - -
74. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 1.753 0.789 - - - - - 0.964 - - FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]
75. ndrg4 ENSDARG00000103937 1234 1.753 0.837 - - - - - 0.916 - - NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
76. APBB3 ENSDARG00000053771 654 1.753 0.778 - - - - - 0.975 - - amyloid beta (A4) precursor protein-binding, family B, member 3 [Source:ZFIN;Acc:ZDB-GENE-140106-53]
77. CHRNB4 ENSDARG00000101677 128 1.747 - 0.946 - - - - 0.801 - - cholinergic receptor, nicotinic, beta 4 (neuronal) [Source:ZFIN;Acc:ZDB-GENE-120809-1]
78. cbln1 ENSDARG00000057296 165 1.746 0.807 - - - - - 0.939 - - cerebellin 1 precursor [Source:ZFIN;Acc:ZDB-GENE-040718-226]
79. PPFIA3 ENSDARG00000077053 310 1.744 0.766 - - - - - 0.978 - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
80. htr3a ENSDARG00000089212 51 1.743 0.743 1.000 - - - - - - - 5-hydroxytryptamine (serotonin) receptor 3A [Source:ZFIN;Acc:ZDB-GENE-071012-5]
81. ddx26b 79 1.742 - 1.000 - - - - 0.742 - - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B, transcript variant X1
82. kcnip1b ENSDARG00000034808, ENSDARG00000111766 136 1.737 - 1.000 - - - - 0.737 - - Kv channel interacting protein 1 b [Source:ZFIN;Acc:ZDB-GENE-041212-57]
83. olfm1b ENSDARG00000014053 1392 1.736 0.777 - - - - - 0.959 - - olfactomedin 1b [Source:ZFIN;Acc:ZDB-GENE-040801-228]
84. zgc:113307 ENSDARG00000044894 17 1.735 0.735 1.000 - - - - - - - zgc:113307 [Source:ZFIN;Acc:ZDB-GENE-050522-29]
85. CLDN20 26 1.735 0.735 1.000 - - - - - - - claudin 20, transcript variant X2
86. zgc:113210 ENSDARG00000002872 99 1.735 0.735 1.000 - - - - - - - zgc:113210 [Source:ZFIN;Acc:ZDB-GENE-050320-83]
87. si:dkey-200l5.4 ENSDARG00000095294 13 1.735 0.735 1.000 - - - - - - - si:dkey-200l5.4 [Source:ZFIN;Acc:ZDB-GENE-091204-393]
88. si:dkey-17e6.2 si:dkey-17e6.2 72 1.732 0.735 - - - - - 0.997 - -
89. KCNS3 KCNS3 82 1.73 - 1.000 - - - - 0.730 - -
90. gabrg2 ENSDARG00000053665 434 1.724 0.765 - - - - - 0.959 - - gamma-aminobutyric acid (GABA) A receptor, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-091118-65]
91. tmem91 ENSDARG00000068456 81 1.723 - 1.000 - - - - 0.723 - - transmembrane protein 91 [Source:ZFIN;Acc:ZDB-GENE-060503-581]
92. NEFH NEFH 101 1.716 0.864 - - - - - 0.852 - -
93. nrxn1a ENSDARG00000061647, ENSDARG00000111866 1069 1.716 - 0.815 - - - - 0.901 - - neurexin 1a [Source:ZFIN;Acc:ZDB-GENE-070206-1]
94. nes ENSDARG00000088805 2710 1.715 - 0.770 - - - - 0.945 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
95. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 1.711 0.756 - - - - - 0.955 - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
96. atp1b2a ENSDARG00000099203 4010 1.711 0.771 - - - - - 0.940 - - ATPase Na+/K+ transporting subunit beta 2a [Source:ZFIN;Acc:ZDB-GENE-001127-2]
97. sypb ENSDARG00000002230 262 1.711 0.756 - - - - - 0.955 - - synaptophysin b [Source:ZFIN;Acc:ZDB-GENE-040718-205]
98. TRPC4_1 TRPC4_1 212 1.708 0.708 1.000 - - - - - - -
99. gsx1 ENSDARG00000035735 1243 1.708 0.743 - - - - - 0.965 - - GS homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-041008-135]
100. lgi2b ENSDARG00000069701, ENSDARG00000116343 66 1.708 0.852 - - - - - 0.856 - - leucine-rich repeat LGI family, member 2b [Source:ZFIN;Acc:ZDB-GENE-060217-3]

There are 1875 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA