Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-137i24.12

Gene Name Gene ID Reads Annotation
si:ch211-137i24.12 ENSDARG00000094537 35 si:ch211-137i24.12 [Source:ZFIN;Acc:ZDB-GENE-060526-36]










Genes with expression patterns similar to si:ch211-137i24.12

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-137i24.12 ENSDARG00000094537 35 7 - 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-137i24.12 [Source:ZFIN;Acc:ZDB-GENE-060526-36]
2. LMTK3 LMTK3 222 2.491 - 0.710 - - 0.875 - 0.906 - -
3. PRRT2 ENSDARG00000103588 913 2.487 - 0.902 - - 0.786 - 0.799 - - proline-rich transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-121210-3]
4. zgc:162331 ENSDARG00000069607 13 1.949 - - - - 0.955 - 0.994 - - zgc:162331 [Source:ZFIN;Acc:ZDB-GENE-070410-75]
5. atcaya ENSDARG00000071678 344 1.862 - - - - 0.970 - 0.892 - - ataxia, cerebellar, Cayman type a [Source:ZFIN;Acc:ZDB-GENE-070705-185]
6. akt3a ENSDARG00000104810 21 1.847 - - - - 0.847 1.000 - - - v-akt murine thymoma viral oncogene homolog 3a [Source:ZFIN;Acc:ZDB-GENE-050419-180]
7. zgc:153932 ENSDARG00000052779, ENSDARG00000113315 3 1.842 - - - - - 1.000 0.842 - - zgc:153932 [Source:ZFIN;Acc:ZDB-GENE-070209-223]
8. sftpbb ENSDARG00000067566 13 1.842 - - - - - 1.000 0.842 - - surfactant protein Bb [Source:ZFIN;Acc:ZDB-GENE-060526-155]
9. asap3 ENSDARG00000021896 19 1.842 - - - - - - 0.842 1.000 - ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 [Source:ZFIN;Acc:ZDB-GENE-050913-39]
10. si:ch211-63o20.10 13 1.842 - - - - - 1.000 0.842 - - si:ch211-63o20.10
11. si:dkey-233h12.4 si:dkey-233h12.4 2 1.842 - - - - - - 0.842 1.000 -
12. CABZ01049058.1 CABZ01049058.1 7 1.842 - - - - - 1.000 0.842 - -
13. btbd3b ENSDARG00000087517 107 1.829 - - - - 0.880 - 0.949 - - BTB (POZ) domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-041210-282]
14. grik4 ENSDARG00000026753 22 1.793 - - - - 0.951 - 0.842 - - glutamate receptor, ionotropic, kainate 4 [Source:ZFIN;Acc:ZDB-GENE-070821-5]
15. CT573248.1 ENSDARG00000074029 10 1.767 - - - - - 0.925 0.842 - -
16. syn2a ENSDARG00000045945 434 1.74 - 0.774 - - - - 0.966 - - synapsin IIa [Source:ZFIN;Acc:ZDB-GENE-040718-341]
17. VSTM2B VSTM2B 149 1.732 - 0.811 - - - - 0.921 - -
18. pnpla4 ENSDARG00000069834, ENSDARG00000110613 15 1.727 - - - 0.727 - 1.000 - - - patatin-like phospholipase domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070410-74]
19. CCDC96 ENSDARG00000035963 5 1.725 - - - - - 0.883 0.842 - - coiled-coil domain containing 96 [Source:ZFIN;Acc:ZDB-GENE-081022-156]
20. slc1a9 ENSDARG00000098269 12 1.71 - 0.710 - - - - - 1.000 - solute carrier family 1 (glutamate transporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-101111-9]
21. si:ch211-197e7.1 ENSDARG00000095200 1 1.71 - 0.710 - - - 1.000 - - - si:ch211-197e7.1 [Source:ZFIN;Acc:ZDB-GENE-081103-26]
22. lrrc18b ENSDARG00000076236 5 1.71 - 0.710 - - - 1.000 - - - leucine rich repeat containing 18b [Source:ZFIN;Acc:ZDB-GENE-110315-1]
23. HYKK_1 HYKK_1 4 1.71 - 0.710 - - - 1.000 - - -
24. CABZ01023601.1 CABZ01023601.1 1 1.71 - 0.710 - - - 1.000 - - -
25. pcbp3 ENSDARG00000054378 74 1.71 - 0.710 - - - - 1.000 - - poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]
26. slc15a1a ENSDARG00000100315 23 1.71 - 0.710 - - - 1.000 - - - solute carrier family 15 (oligopeptide transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-091204-9]
27. ENTHD1 ENTHD1 235 1.707 - 0.843 - - - - 0.864 - -
28. cacng2a ENSDARG00000032565 99 1.707 - 0.710 - - - - 0.997 - - calcium channel, voltage-dependent, gamma subunit 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1401]
29. grid2ipb ENSDARG00000095603, ENSDARG00000111282 90 1.704 - - - - 0.821 0.883 - - - glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein, b [Source:ZFIN;Acc:ZDB-GENE-040724-161]
30. DOCK4 DOCK4 78 1.704 - 0.710 - - - - 0.994 - -
31. lhx5 ENSDARG00000057936 785 1.702 - 0.710 - - - - 0.992 - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
32. xkr8.1 ENSDARG00000004498 18 1.701 - - - - - 0.859 0.842 - - XK, Kell blood group complex subunit-related family, member 8, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-110106-1]
33. fam163b ENSDARG00000073914 46 1.701 - - - - - 0.859 0.842 - - family with sequence similarity 163, member B [Source:ZFIN;Acc:ZDB-GENE-091204-96]
34. erap2 ENSDARG00000098618 16 1.692 - 0.710 - - - - 0.982 - - endoplasmic reticulum aminopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-080402-6]
35. lhx1b ENSDARG00000007944, ENSDARG00000111635 254 1.676 - 0.737 - - - - 0.939 - - LIM homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-980526-116]
36. CAMSAP3 ENSDARG00000059475 263 1.673 - 0.852 - - - - 0.821 - - calmodulin regulated spectrin-associated protein family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060503-811]
37. BX927122.3 BX927122.3 19 1.669 - 0.710 - - 0.959 - - - -
38. LINGO2 LINGO2 300 1.668 - 0.737 - - - - 0.931 - -
39. si:ch73-92e7.4 ENSDARG00000092849, ENSDARG00000110100 37 1.668 - - - - - 0.826 0.842 - - si:ch73-92e7.4 [Source:ZFIN;Acc:ZDB-GENE-081031-48]
40. NFATC4 ENSDARG00000054162 44 1.667 - 0.710 - - 0.957 - - - - nuclear factor of activated T cells 4 [Source:ZFIN;Acc:ZDB-GENE-070912-659]
41. HELZ2_1 ENSDARG00000012600 53 1.665 - 0.710 - - 0.955 - - - - helicase with zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:30021]
42. wsb2 ENSDARG00000058608 11 1.652 - 0.810 - - - - 0.842 - - WD repeat and SOCS box containing 2 [Source:ZFIN;Acc:ZDB-GENE-081104-26]
43. hoxa2b ENSDARG00000023031 706 1.645 - 0.844 - - - - 0.801 - - homeobox A2b [Source:ZFIN;Acc:ZDB-GENE-990415-98]
44. slc8a2b ENSDARG00000100592 598 1.644 - - - - 0.711 - 0.933 - - solute carrier family 8 (sodium/calcium exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-050419-209]
45. chrm3a ENSDARG00000071091 72 1.643 - - - - 0.934 - 0.709 - - cholinergic receptor, muscarinic 3a [Source:ZFIN;Acc:ZDB-GENE-090410-4]
46. arhgef9a ENSDARG00000061746 58 1.643 - 0.710 - - - - 0.933 - - Cdc42 guanine nucleotide exchange factor (GEF) 9a [Source:ZFIN;Acc:ZDB-GENE-070705-271]
47. BX470131.1 BX470131.1 86 1.643 - 0.710 - - - - 0.933 - -
48. ROBO3_1 ROBO3_1 468 1.641 - 0.739 - - - - 0.902 - -
49. tnxb 30 1.636 - 0.710 - - 0.926 - - - - tenascin XB
50. glrba ENSDARG00000052782, ENSDARG00000117018 4 1.636 - 0.737 - - - - 0.899 - - glycine receptor, beta a [Source:ZFIN;Acc:ZDB-GENE-010410-2]
51. b3galnt2 ENSDARG00000046133 68 1.632 - 0.733 - - - - 0.899 - - beta-1,3-N-acetylgalactosaminyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050522-358]
52. TMEM57 TMEM57 260 1.631 - 0.710 - - - - 0.921 - -
53. lrp11 ENSDARG00000034076 313 1.628 - 0.706 - - - - 0.922 - - low density lipoprotein receptor-related protein 11 [Source:ZFIN;Acc:ZDB-GENE-030131-7847]
54. CABZ01061873.1 CABZ01061873.1 51 1.627 - 0.737 - - - - 0.890 - -
55. insm1a ENSDARG00000091756 1838 1.614 - 0.856 - - - - 0.758 - - insulinoma-associated 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1810]
56. si:dkeyp-66a7.1 si:dkeyp-66a7.1 6 1.613 - 0.710 - - - 0.903 - - -
57. ptprna ENSDARG00000058646 1327 1.606 - 0.798 - - - - 0.808 - - protein tyrosine phosphatase, receptor type, Na [Source:ZFIN;Acc:ZDB-GENE-030131-3511]
58. CABZ01021538.1 CABZ01021538.1 67 1.605 - 0.710 - - - - 0.895 - -
59. si:ch1073-221c23.2 si:ch1073-221c23.2 17 1.605 - - - 0.763 - - 0.842 - -
60. pdzd4 175 1.604 - 0.710 - - - - 0.894 - - PDZ domain containing 4, transcript variant X2
61. nhlh2 ENSDARG00000025495 1860 1.591 - 0.705 - - - - 0.886 - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
62. st6gal1 ENSDARG00000044514 142 1.59 - 0.710 - - - - 0.880 - - ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 [Source:ZFIN;Acc:ZDB-GENE-060322-3]
63. ttll7 ENSDARG00000062973 519 1.583 - 0.770 - - - - 0.813 - - tubulin tyrosine ligase-like family, member 7 [Source:ZFIN;Acc:ZDB-GENE-070112-2112]
64. pigf ENSDARG00000032780 7 1.579 - 0.737 - - - - 0.842 - - phosphatidylinositol glycan anchor biosynthesis, class F [Source:ZFIN;Acc:ZDB-GENE-040426-1801]
65. hoxc4a ENSDARG00000070338 1382 1.574 - 0.736 - - - - 0.838 - - homeobox C4a [Source:ZFIN;Acc:ZDB-GENE-990415-112]
66. thsd7ba ENSDARG00000095022 231 1.567 - - - - 0.708 - 0.859 - - thrombospondin, type I, domain containing 7Ba [Source:ZFIN;Acc:ZDB-GENE-070621-2]
67. atp8b2 ENSDARG00000099216 21 1.56 - - - - - 0.718 0.842 - - ATPase phospholipid transporting 8B2 [Source:ZFIN;Acc:ZDB-GENE-030131-2474]
68. snap25b ENSDARG00000058117 469 1.557 - - - - 0.734 - 0.823 - - synaptosomal-associated protein, 25b [Source:ZFIN;Acc:ZDB-GENE-980526-392]
69. atp2b2 ENSDARG00000044902, ENSDARG00000063433 140 1.553 - 0.710 - - - - 0.843 - - ATPase plasma membrane Ca2+ transporting 2 [Source:ZFIN;Acc:ZDB-GENE-061016-1]
70. si:dkey-193c22.1 ENSDARG00000093687 104 1.552 - 0.710 - - - - 0.842 - - si:dkey-193c22.1 [Source:ZFIN;Acc:ZDB-GENE-030131-7957]
71. rassf4 ENSDARG00000012460 43 1.552 - 0.710 - - - - 0.842 - - Ras association (RalGDS/AF-6) domain family member 4 [Source:ZFIN;Acc:ZDB-GENE-050102-3]
72. SMARCA4 ENSDARG00000104339 48 1.552 - 0.710 - - - - 0.842 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]
73. plscr3a ENSDARG00000093078 7 1.552 - 0.710 - - - - 0.842 - - phospholipid scramblase 3a [Source:ZFIN;Acc:ZDB-GENE-060531-17]
74. cldnd ENSDARG00000006580 17 1.552 - 0.710 - - - - 0.842 - - claudin d [Source:ZFIN;Acc:ZDB-GENE-010328-4]
75. cdk5r1a ENSDARG00000037916 46 1.552 - 0.710 - - - - 0.842 - - cyclin-dependent kinase 5, regulatory subunit 1a (p35) [Source:ZFIN;Acc:ZDB-GENE-080723-17]
76. camkvb ENSDARG00000005141, ENSDARG00000117013 262 1.549 - - - - 0.781 - 0.768 - - CaM kinase-like vesicle-associated b [Source:ZFIN;Acc:ZDB-GENE-040426-1140]
77. zgc:174623 37 1.54 - 0.714 - - - 0.826 - - - zgc:174623, transcript variant X1
78. TMEM55B_1 TMEM55B_1 495 1.522 - - - - 0.725 - 0.797 - -
79. scg2b ENSDARG00000038574 345 1.508 - 0.710 - - - - 0.798 - - secretogranin II (chromogranin C), b [Source:ZFIN;Acc:ZDB-GENE-061103-160]
80. fez1 ENSDARG00000023174 701 1.507 - 0.710 - - - - 0.797 - - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
81. aatkb ENSDARG00000104442 392 1.497 - 0.710 - - - - 0.787 - - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
82. hsp70l_1 ENSDARG00000055723 72 1.492 - 0.710 - - - - - 0.782 - heat shock cognate 70-kd protein, like [Source:ZFIN;Acc:ZDB-GENE-050321-1]
83. LANCL2 ENSDARG00000045465 1221 1.488 - - - - 0.767 - 0.721 - - LanC lantibiotic synthetase component C-like 2 (bacterial) [Source:ZFIN;Acc:ZDB-GENE-070209-191]
84. LRFN4 LRFN4 59 1.477 - 0.710 - - - - 0.767 - -
85. foxb1b ENSDARG00000053650, ENSDARG00000110408, ENSDARG00000113373 51 1.469 - 0.710 - - 0.759 - - - - forkhead box B1b [Source:ZFIN;Acc:ZDB-GENE-990415-77]
86. gad1b ENSDARG00000027419 440 1.465 - 0.710 - - - - 0.755 - - glutamate decarboxylase 1b [Source:ZFIN;Acc:ZDB-GENE-030909-3]
87. PPP1R9B PPP1R9B 855 1.464 - - - - 0.709 - 0.755 - -
88. pcyt1ba ENSDARG00000058162 206 1.462 - 0.710 - - - - 0.752 - - phosphate cytidylyltransferase 1, choline, beta a [Source:ZFIN;Acc:ZDB-GENE-061220-4]
89. dlg4 88 1.453 - 0.731 - - - - 0.722 - - discs large MAGUK scaffold protein 4, transcript variant X5
90. gabrb3 ENSDARG00000023771, ENSDARG00000114822 180 1.436 - 0.710 - - - - 0.726 - - gamma-aminobutyric acid (GABA) A receptor, beta 3 [Source:ZFIN;Acc:ZDB-GENE-101102-2]
91. kcna1 kcna1 174 1.423 - 0.710 - - - - 0.713 - -
92. GADD45G_1 GADD45G_1 236 1.417 - 0.710 - - - - 0.707 - -
93. VSIG10L ENSDARG00000089237 12 1 - - - - - 1.000 - - - V-set and immunoglobulin domain containing 10 like [Source:ZFIN;Acc:ZDB-GENE-131127-231]
94. AL954132.1 AL954132.1 1 1 - - - - - 1.000 - - -
95. CABZ01002768.1 ENSDARG00000098901 2 1 - - - - - 1.000 - - -
96. gcdhl gcdhl 38 1 - - - - - 1.000 - - -
97. si:dkey-39e8.5 si:dkey-39e8.5 2 1 - - - - - 1.000 - - -
98. siglec15l ENSDARG00000076132 2 1 - - - - - - - 1.000 - sialic acid binding Ig-like lectin 15, like [Source:ZFIN;Acc:ZDB-GENE-100922-281]
99. si:ch211-169j7.3 si:ch211-169j7.3 4 1 - - - - - 1.000 - - -
100. entpd8 ENSDARG00000005565 18 1 - - - - - 1.000 - - - ectonucleoside triphosphate diphosphohydrolase 8 [Source:ZFIN;Acc:ZDB-GENE-040724-142]

There are 1854 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA