Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-135l21.9

Gene Name Gene ID Reads Annotation
si:ch211-135l21.9 si:ch211-135l21.9 8










Genes with expression patterns similar to si:ch211-135l21.9

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-135l21.9 si:ch211-135l21.9 8 4 - 1.000 - 1.000 1.000 - - - 1.000
2. olfcg4 ENSDARG00000099773 1 2 - 1.000 - 1.000 - - - - - olfactory receptor C family, g4 [Source:ZFIN;Acc:ZDB-GENE-060503-66]
3. si:ch73-92e20.2 si:ch73-92e20.2 2 2 - - - 1.000 - - - - 1.000
4. mamdc2a ENSDARG00000098345 21 2 - 1.000 - 1.000 - - - - - MAM domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-16]
5. si:dkey-65b12.12 ENSDARG00000094458 26 1.858 - 1.000 - - - - - - 0.858 si:dkey-65b12.12 [Source:ZFIN;Acc:ZDB-GENE-060526-325]
6. RIMS2 RIMS2 2 1.858 - - - 1.000 - - - - 0.858
7. CABZ01035647.1 CABZ01035647.1 5 1.858 - - - 1.000 - - - - 0.858
8. asf1ba_1 ENSDARG00000101037 3 1.858 - 1.000 - - - - - - 0.858 anti-silencing function 1Ba histone chaperone [Source:ZFIN;Acc:ZDB-GENE-031118-197]
9. CABZ01087946.1 CABZ01087946.1 2 1.858 - 1.000 - - - - - - 0.858
10. zgc:198241 ENSDARG00000076483, ENSDARG00000116081 3 1.858 - 1.000 - - - - - - 0.858 zgc:198241 [Source:ZFIN;Acc:ZDB-GENE-080303-14]
11. ghrh ENSDARG00000069481, ENSDARG00000111551 9 1.752 - - - 1.000 0.752 - - - - growth hormone releasing hormone [Source:ZFIN;Acc:ZDB-GENE-070426-1]
12. U6_18 U6_18 12 1.466 - - - - 0.742 - - - 0.724
13. CT027762.3 CT027762.3 17 1.459 - 0.712 - - - - - - 0.747
14. IQCK ENSDARG00000076831, ENSDARG00000112508 6 1 - 1.000 - - - - - - - IQ motif containing K [Source:ZFIN;Acc:ZDB-GENE-081022-109]
15. npffr2.1 npffr2.1 60 1 - 1.000 - - - - - - -
16. CABZ01011032.1 CABZ01011032.1 1 1 - - - 1.000 - - - - -
17. CU693369.1 CU693369.1 2 1 - 1.000 - - - - - - -
18. SUSD4 ENSDARG00000026335 195 1 - 1.000 - - - - - - - sushi domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-110511-1]
19. si:ch1073-185p12.2 ENSDARG00000100199 7 1 - 1.000 - - - - - - - si:ch1073-185p12.2 [Source:ZFIN;Acc:ZDB-GENE-110411-196]
20. si:dkey-220k22.3 ENSDARG00000094693 166 1 - 1.000 - - - - - - - si:dkey-220k22.3 [Source:ZFIN;Acc:ZDB-GENE-060526-257]
21. bmpr2b ENSDARG00000020057 8 1 - - - 1.000 - - - - - bone morphogenetic protein receptor, type II b (serine/threonine kinase) [Source:ZFIN;Acc:ZDB-GENE-070618-2]
22. nobox 5 1 - 1.000 - - - - - - - NOBOX oogenesis homeobox
23. zgc:175280 ENSDARG00000099111 71 1 - 1.000 - - - - - - - zgc:175280 [Source:ZFIN;Acc:ZDB-GENE-080219-39]
24. BX000701.3 BX000701.3 4 1 - 1.000 - - - - - - -
25. nr1d1 ENSDARG00000033160 3 1 - - - 1.000 - - - - - nuclear receptor subfamily 1, group d, member 1 [Source:ZFIN;Acc:ZDB-GENE-050105-1]
26. CU655961.3 ENSDARG00000106724 14 1 - 1.000 - - - - - - -
27. C21H11orf82 C21H11orf82 50 1 - 1.000 - - - - - - -
28. nkx2.5 ENSDARG00000018004, ENSDARG00000116714 23 1 - 1.000 - - - - - - - NK2 homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-321]
29. ENSDARG00000063316 ENSDARG00000063316 4 1 - - - 1.000 - - - - -
30. si:ch211-195i24.1 si:ch211-195i24.1 10 1 - 1.000 - - - - - - -
31. zgc:173837 ENSDARG00000076949 24 1 - 1.000 - - - - - - - zgc:173837 [Source:ZFIN;Acc:ZDB-GENE-080213-12]
32. si:dkey-106m10.5 si:dkey-106m10.5 10 1 - - - 1.000 - - - - -
33. sebox ENSDARG00000042526 2 1 - 1.000 - - - - - - - SEBOX homeobox [Source:ZFIN;Acc:ZDB-GENE-021206-4]
34. CR936975.1 ENSDARG00000096862 22 1 - 1.000 - - - - - - -
35. bbs10 ENSDARG00000069515, ENSDARG00000110925 36 1 - 1.000 - - - - - - - Bardet-Biedl syndrome 10 [Source:ZFIN;Acc:ZDB-GENE-060503-355]
36. jam3a ENSDARG00000114589 630 1 - 1.000 - - - - - - - junctional adhesion molecule 3a [Source:ZFIN;Acc:ZDB-GENE-070424-177]
37. AL844567.1_1 AL844567.1_1 34 1 - 1.000 - - - - - - -
38. apoob ENSDARG00000026444, ENSDARG00000109942 4 1 - - - 1.000 - - - - - apolipoprotein O, b [Source:ZFIN;Acc:ZDB-GENE-041001-40]
39. sphkap ENSDARG00000017429 60 1 - 1.000 - - - - - - - SPHK1 interactor, AKAP domain containing [Source:ZFIN;Acc:ZDB-GENE-050419-32]
40. lmbrd2a ENSDARG00000099566 15 1 - - - 1.000 - - - - - LMBR1 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050417-32]
41. MSH4 ENSDARG00000075826 37 1 - 1.000 - - - - - - - mutS homolog 4 [Source:ZFIN;Acc:ZDB-GENE-131121-643]
42. vwf ENSDARG00000077231 5 1 - - - 1.000 - - - - - von Willebrand factor [Source:ZFIN;Acc:ZDB-GENE-070103-1]
43. CT027674.1 ENSDARG00000106606 11 1 - 1.000 - - - - - - - probable E3 ubiquitin-protein ligase TRIML1 [Source:NCBI gene;Acc:108191962]
44. CR933820.2 CR933820.2 152 1 - 1.000 - - - - - - -
45. CDR2_1 CDR2_1 8 1 - - - 1.000 - - - - -
46. ccdc129 37 1 - 1.000 - - - - - - - coiled-coil domain containing 129, transcript variant X2
47. CABZ01081752.1 ENSDARG00000099245 84 1 - 1.000 - - - - - - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100330167]
48. pappab ENSDARG00000059858 11 1 - - - 1.000 - - - - - pregnancy-associated plasma protein A, pappalysin 1b [Source:ZFIN;Acc:ZDB-GENE-060526-71]
49. si:ch211-155e24.5 si:ch211-155e24.5 2 1 - 1.000 - - - - - - -
50. si:dkey-58f10.10 ENSDARG00000094284 4 1 - - - 1.000 - - - - - si:dkey-58f10.10 [Source:ZFIN;Acc:ZDB-GENE-060526-312]
51. TMEM63C ENSDARG00000004158, ENSDARG00000112348 21 1 - 1.000 - - - - - - - transmembrane protein 63C [Source:ZFIN;Acc:ZDB-GENE-120928-2]
52. slc35f1 ENSDARG00000053003 0 1 - - - 1.000 - - - - - solute carrier family 35, member F1 [Source:ZFIN;Acc:ZDB-GENE-060503-463]
53. RAB31 0 1 - - - 1.000 - - - - - RAB31, member RAS oncogene family, transcript variant X1
54. zgc:193690 34 1 - 1.000 - - - - - - - zgc:193690
55. si:dkeyp-41f9.4 ENSDARG00000092269 3 1 - 1.000 - - - - - - - si:dkeyp-41f9.4 [Source:ZFIN;Acc:ZDB-GENE-091204-320]
56. CR848836.6 CR848836.6 93 1 - 1.000 - - - - - - -
57. si:dkeyp-35e5.9 ENSDARG00000103527 24 1 - 1.000 - - - - - - - si:dkeyp-35e5.9 [Source:ZFIN;Acc:ZDB-GENE-110913-107]
58. C24H8orf34 C24H8orf34 1 1 - 1.000 - - - - - - -
59. edaradd ENSDARG00000062289 66 1 - 1.000 - - - - - - - EDAR-associated death domain [Source:ZFIN;Acc:ZDB-GENE-050114-5]
60. CU694319.1 CU694319.1 72 1 - 1.000 - - - - - - -
61. zgc:172079 ENSDARG00000056762, ENSDARG00000077644, ENSDARG00000105644 102 1 - 1.000 - - - - - - - zgc:172079 [Source:ZFIN;Acc:ZDB-GENE-080204-103]
62. buc ENSDARG00000096095 0 1 - - - 1.000 - - - - - bucky ball [Source:ZFIN;Acc:ZDB-GENE-070117-694]
63. PEG3_13 PEG3_13 5 1 - - - 1.000 - - - - -
64. slc43a3a ENSDARG00000059682 27 1 - 1.000 - - - - - - - solute carrier family 43, member 3a [Source:ZFIN;Acc:ZDB-GENE-110208-8]
65. CABZ01060813.1 CABZ01060813.1 12 1 - 1.000 - - - - - - -
66. trim35-3_1 ENSDARG00000052255 6 1 - 1.000 - - - - - - - tripartite motif containing 35-3 [Source:ZFIN;Acc:ZDB-GENE-070912-56]
67. si:ch211-15o14.2 si:ch211-15o14.2 6 1 - 1.000 - - - - - - -
68. si:rp71-7l19.6 si:rp71-7l19.6 12 1 - - - 1.000 - - - - -
69. echdc1 68 1 - 1.000 - - - - - - - enoyl CoA hydratase domain containing 1, transcript variant 1
70. CR854963.2 ENSDARG00000114235 82 1 - 1.000 - - - - - - -
71. si:dkey-208n4.1 si:dkey-208n4.1 10 1 - - - - - - - - 1.000
72. CU459094.1 ENSDARG00000110517 17 1 - 1.000 - - - - - - - uncharacterized LOC108191666 [Source:NCBI gene;Acc:108191666]
73. pax4 ENSDARG00000021336 29 1 - 1.000 - - - - - - - paired box 4 [Source:ZFIN;Acc:ZDB-GENE-041210-244]
74. chia.3 ENSDARG00000009612 14 1 - 1.000 - - - - - - - chitinase, acidic.3 [Source:ZFIN;Acc:ZDB-GENE-040426-2891]
75. DHX32 DHX32 181 1 - 1.000 - - - - - - -
76. gaa ENSDARG00000090714 19 1 - 1.000 - - - - - - - glucosidase, alpha; acid (Pompe disease, glycogen storage disease type II) [Source:ZFIN;Acc:ZDB-GENE-070212-2]
77. elfn1b ENSDARG00000074372 25 1 - 1.000 - - - - - - - extracellular leucine-rich repeat and fibronectin type III domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-080327-21]
78. CABZ01117437.1 CABZ01117437.1 11 1 - 1.000 - - - - - - -
79. si:dkey-113d16.9 si:dkey-113d16.9 345 1 - 1.000 - - - - - - -
80. clcn1a ENSDARG00000062084 120 1 - 1.000 - - - - - - - chloride channel, voltage-sensitive 1a [Source:ZFIN;Acc:ZDB-GENE-060503-333]
81. CABZ01056052.1 ENSDARG00000110748 3 1 - 1.000 - - - - - - -
82. si:zfos-44h1.1 si:zfos-44h1.1 1 1 - - - 1.000 - - - - -
83. NLRC5 ENSDARG00000024631 11 1 - 1.000 - - - - - - - NLR family, CARD domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-080429-2]
84. CR753817.1 ENSDARG00000110927 26 1 - 1.000 - - - - - - -
85. eno4 ENSDARG00000070598 78 1 - 1.000 - - - - - - - enolase 4 [Source:ZFIN;Acc:ZDB-GENE-061013-677]
86. edn3b ENSDARG00000086669 8 1 - - - 1.000 - - - - - endothelin 3b [Source:ZFIN;Acc:ZDB-GENE-090313-235]
87. BIN3 ENSDARG00000099651 5 1 - 1.000 - - - - - - - bridging integrator 3 [Source:ZFIN;Acc:ZDB-GENE-030131-2696]
88. rhol ENSDARG00000070666 0 1 - - - 1.000 - - - - - rhodopsin, like [Source:ZFIN;Acc:ZDB-GENE-070424-6]
89. BX548047.2 ENSDARG00000115500 17 1 - 1.000 - - - - - - -
90. PPP2R5B ENSDARG00000054931 213 1 - 1.000 - - - - - - - protein phosphatase 2, regulatory subunit B', beta [Source:ZFIN;Acc:ZDB-GENE-101208-1]
91. si:ch211-208f21.1 si:ch211-208f21.1 1 1 - 1.000 - - - - - - -
92. KBTBD11 ENSDARG00000104958 8 1 - 1.000 - - - - - - - kelch repeat and BTB (POZ) domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-130530-678]
93. FP102786.1 ENSDARG00000090551 3 1 - 1.000 - - - - - - - GTPase IMAP family member 8-like [Source:NCBI gene;Acc:101882698]
94. BX465848.2 ENSDARG00000116920 6 1 - - - 1.000 - - - - -
95. C11H3orf83_1 C11H3orf83_1 3 1 - - - 1.000 - - - - -
96. zgc:175136 ENSDARG00000103024 4 1 - - - 1.000 - - - - - zgc:175136 [Source:ZFIN;Acc:ZDB-GENE-080204-122]
97. KLF10 1 1 - 1.000 - - - - - - - Kruppel-like factor 10
98. lrrn3 lrrn3 137 1 - 1.000 - - - - - - -
99. chrnb1l ENSDARG00000022532, ENSDARG00000113943, ENSDARG00000116196 3 1 - 1.000 - - - - - - - cholinergic receptor, nicotinic, beta 1 (muscle) like [Source:ZFIN;Acc:ZDB-GENE-060811-1]
100. AKNA ENSDARG00000087110 39 1 - - - 1.000 - - - - - AT-hook transcription factor [Source:ZFIN;Acc:ZDB-GENE-091204-170]

There are 603 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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